Cow genome map


           Conread name:
           Ss1.1-4cip-UMC-p4civp1-007-g11.3
        

               Conread position:
               1-178
               

               Cow position:
               chr11:60195686-60195864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               67, 92
               

               Conread position:
               1-266
               

               Cow position:
               chr11:11669565-11669301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               39, 64
               

               Conread position:
               1-267
               

               Cow position:
               chr11:37734225-37733953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 236
               

               Conread position:
               2-267
               

               Cow position:
               chr11:718337-718074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 98
               

               Conread position:
               6-248
               

               Cow position:
               chr11:47976687-47976425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               79-272
               

               Cow position:
               chr11:27617353-27617544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               66, 86
               

               Conread position:
               105-272
               

               Cow position:
               chr11:8803831-8803999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               43, 55
               
Show alignments to all cow chromosomes.