Cow genome map


           Conread name:
           Ss1.1-4cip-UMC-p4civp1-007-g11.3
        

               Conread position:
               1-201
               

               Cow position:
               chr13:27867168-27866968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               158
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               67, 112
               

               Conread position:
               1-267
               

               Cow position:
               chr13:28105715-28105459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               55, 20
               

               Conread position:
               1-273
               

               Cow position:
               chr13:52354278-52354000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               2-267
               

               Cow position:
               chr13:32748237-32747965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               66, 96
               

               Conread position:
               3-265
               

               Cow position:
               chr13:27391182-27390925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               146, 67
               

               Conread position:
               9-273
               

               Cow position:
               chr13:32727434-32727163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 143
               

               Conread position:
               18-273
               

               Cow position:
               chr13:34287835-34287571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 0
               
Show alignments to all cow chromosomes.