Cow genome map


           Conread name:
           Ss1.1-4cip-UMC-p4civp1-007-g11.3
        

               Conread position:
               1-171
               

               Cow position:
               chr5:39947003-39947175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               37, 93
               

               Conread position:
               1-201
               

               Cow position:
               chr5:58354403-58354604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               164
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 98
               

               Conread position:
               1-248
               

               Cow position:
               chr5:61772818-61773055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               67, 113
               

               Conread position:
               1-251
               

               Cow position:
               chr5:26227863-26228121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               1-267
               

               Cow position:
               chr5:9416929-9416656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               126, 54
               

               Conread position:
               4-272
               

               Cow position:
               chr5:67958009-67957746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 98
               

               Conread position:
               6-201
               

               Cow position:
               chr5:59053362-59053165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               6-270
               

               Cow position:
               chr5:59109849-59109569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 0
               
Show alignments to all cow chromosomes.