Cow genome map
Conread name: | Ss1.1-Bra1-PBL_15_E02.5 |
Conread position: | 53-395 |
Cow position: | chr1:43976583-43976243 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 238 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 20, 262 |
Conread position: | 66-437 |
Cow position: | chr1:54987522-54987895 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 250 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 50, 58 |
Conread position: | 68-405 |
Cow position: | chr1:79915811-79915465 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 223 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 37, 63 |
Conread position: | 72-268 |
Cow position: | chr1:53020215-53020427 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 156 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 75-391 |
Cow position: | chr1:63123167-63122860 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 19 |
Conread position: | 76-384 |
Cow position: | chr1:56440071-56439751 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 218 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 46, 13 |
Conread position: | 77-393 |
Cow position: | chr1:17478584-17478273 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 215 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 37, 60 |
Conread position: | 78-362 |
Cow position: | chr1:68593594-68593312 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 204 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 150, 40 |
Conread position: | 79-258 |
Cow position: | chr1:55867151-55867332 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 146 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 37, 96 |
Conread position: | 79-316 |
Cow position: | chr1:40967625-40967390 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 163 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 39, 17 |
Conread position: | 79-339 |
Cow position: | chr1:80620412-80620669 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 190 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 40, 131 |
Conread position: | 79-368 |
Cow position: | chr1:88482901-88482603 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 214 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 37, 88 |
Conread position: | 79-392 |
Cow position: | chr1:78069209-78069527 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 211 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 35, 98 |
Conread position: | 79-395 |
Cow position: | chr1:77387843-77388161 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 219 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 35, 13 |
Conread position: | 79-396 |
Cow position: | chr1:66828923-66828596 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 216 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 43, 67 |
Conread position: | 79-397 |
Cow position: | chr1:5265807-5266128 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 218 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 13, 83 |
Conread position: | 79-402 |
Cow position: | chr1:29791388-29791705 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 99 |
Conread position: | 79-406 |
Cow position: | chr1:50922744-50923097 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 239 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 17, 91 |
Conread position: | 80-320 |
Cow position: | chr1:15786083-15786320 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 182 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 38, 20 |
Conread position: | 80-361 |
Cow position: | chr1:70035471-70035190 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 192 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 34, 60 |
Conread position: | 80-361 |
Cow position: | chr1:74545191-74545477 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 198 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 33, 62 |
Conread position: | 80-361 |
Cow position: | chr1:91059747-91059462 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 200 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 132, 36 |
Conread position: | 80-382 |
Cow position: | chr1:29605486-29605796 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 210 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 47, 22 |
Conread position: | 81-342 |
Cow position: | chr1:71453532-71453798 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 195 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 9, 47 |
Conread position: | 81-371 |
Cow position: | chr1:11408932-11408624 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 205 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 33, 177 |
Conread position: | 81-386 |
Cow position: | chr1:26624270-26624576 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 35 |
Conread position: | 82-348 |
Cow position: | chr1:67482350-67482077 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 196 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 62, 34 |
Conread position: | 82-364 |
Cow position: | chr1:40647065-40646777 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 187 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 90, 81 |
Conread position: | 82-391 |
Cow position: | chr1:53648534-53648222 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 213 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 40, 86 |
Conread position: | 82-416 |
Cow position: | chr1:9462978-9463307 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 84 |
Conread position: | 84-393 |
Cow position: | chr1:40479102-40479412 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 219 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 34, 26 |
Conread position: | 85-371 |
Cow position: | chr1:22774071-22774361 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 201 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 29, 92 |
Conread position: | 87-395 |
Cow position: | chr1:64608732-64609040 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 210 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 34, 71 |
Conread position: | 88-319 |
Cow position: | chr1:74754314-74754541 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 163 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 25, 72 |
Conread position: | 88-376 |
Cow position: | chr1:5215214-5215504 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 199 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 26, 39 |
Conread position: | 88-398 |
Cow position: | chr1:53781864-53781566 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 224 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 37, 28 |
Conread position: | 89-398 |
Cow position: | chr1:68521825-68521511 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 219 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 34, 27 |
Conread position: | 90-309 |
Cow position: | chr1:31121618-31121839 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 162 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 26, 138 |
Conread position: | 90-345 |
Cow position: | chr1:1940934-1941181 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 186 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 27, 85 |
Conread position: | 95-372 |
Cow position: | chr1:4279084-4278811 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 185 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 91, 26 |
Conread position: | 95-405 |
Cow position: | chr1:71121765-71121447 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 225 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 19, 35 |
Conread position: | 109-289 |
Cow position: | chr1:34945221-34945038 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 135 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 23, 10 |
Conread position: | 109-394 |
Cow position: | chr1:11210712-11210441 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 199 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 168, 9 |
Conread position: | 113-372 |
Cow position: | chr1:3667276-3667530 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 182 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 44, 10 |
Conread position: | 122-405 |
Cow position: | chr1:82569857-82569566 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 209 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 91, 145 |
Conread position: | 127-358 |
Cow position: | chr1:23577184-23577410 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 163 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 17, 61 |
Conread position: | 129-395 |
Cow position: | chr1:29431091-29430820 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 192 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 153, 51 |
Conread position: | 134-404 |
Cow position: | chr1:41731865-41732137 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 185 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 88, 39 |
Conread position: | 135-361 |
Cow position: | chr1:84778379-84778149 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 160 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 56, 38 |
Conread position: | 144-337 |
Cow position: | chr1:52162965-52163150 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 147 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 136, 30 |
Conread position: | 159-341 |
Cow position: | chr1:62424481-62424668 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 142 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 52, 121 |
Conread position: | 159-391 |
Cow position: | chr1:60086786-60086546 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 168 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 26, 13 |
Conread position: | 215-372 |
Cow position: | chr1:55154050-55154212 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 124 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 217-421 |
Cow position: | chr1:7631640-7631442 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 150 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 11, 42 |
Conread position: | 218-370 |
Cow position: | chr1:79133074-79132920 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 117 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 241-375 |
Cow position: | chr1:6798768-6798903 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 104 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 39, 93 |
Conread position: | 243-473 |
Cow position: | chr1:55867450-55867676 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 130 |
Conread position: | 253-393 |
Cow position: | chr1:90298247-90298105 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 109 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 253-403 |
Cow position: | chr1:37306169-37306322 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 114 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 24, 124 |
Show alignments to all cow chromosomes.