Cow genome map
| Conread name: | Ss1.1-Bra1-PBL_15_E02.5 |
| Conread position: | 69-391 |
| Cow position: | chr2:17827999-17827687 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 47, 159 |
| Conread position: | 69-392 |
| Cow position: | chr2:23128545-23128857 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 243 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 47, 20 |
| Conread position: | 74-368 |
| Cow position: | chr2:22132092-22132386 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 16, 100 |
| Conread position: | 77-399 |
| Cow position: | chr2:37448684-37449026 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 13, 100 |
| Conread position: | 78-392 |
| Cow position: | chr2:61078736-61078429 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 38, 46 |
| Conread position: | 79-323 |
| Cow position: | chr2:62221817-62222065 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 93 |
| Conread position: | 79-336 |
| Cow position: | chr2:13853355-13853099 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 45 |
| Conread position: | 79-342 |
| Cow position: | chr2:26440878-26441145 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 38, 87 |
| Conread position: | 79-367 |
| Cow position: | chr2:30186525-30186833 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 101, 72 |
| Conread position: | 79-375 |
| Cow position: | chr2:31452060-31451752 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 16, 98 |
| Conread position: | 79-383 |
| Cow position: | chr2:53176735-53176430 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 61 |
| Conread position: | 79-393 |
| Cow position: | chr2:54796910-54797230 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 35, 98 |
| Conread position: | 79-395 |
| Cow position: | chr2:10981474-10981775 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 49, 62 |
| Conread position: | 79-398 |
| Cow position: | chr2:42169630-42169946 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 225 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 198, 33 |
| Conread position: | 80-392 |
| Cow position: | chr2:8206040-8205723 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 96 |
| Conread position: | 80-393 |
| Cow position: | chr2:3627898-3628212 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 34, 14 |
| Conread position: | 80-398 |
| Cow position: | chr2:51809033-51809358 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 34, 97 |
| Conread position: | 81-338 |
| Cow position: | chr2:4694129-4693867 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 160, 174 |
| Conread position: | 82-336 |
| Cow position: | chr2:80441757-80441504 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 32, 147 |
| Conread position: | 82-347 |
| Cow position: | chr2:1138443-1138703 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 154, 34 |
| Conread position: | 85-249 |
| Cow position: | chr2:71531916-71532082 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 91 |
| Conread position: | 85-342 |
| Cow position: | chr2:85472444-85472184 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 29, 118 |
| Conread position: | 87-393 |
| Cow position: | chr2:9412552-9412244 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 27, 43 |
| Conread position: | 88-390 |
| Cow position: | chr2:66306839-66307151 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 56 |
| Conread position: | 88-398 |
| Cow position: | chr2:66155737-66155408 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 23, 74 |
| Conread position: | 88-398 |
| Cow position: | chr2:80806139-80806444 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 224 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 33, 29 |
| Conread position: | 94-393 |
| Cow position: | chr2:33341395-33341698 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 100, 34 |
| Conread position: | 94-395 |
| Cow position: | chr2:36978149-36977843 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 22, 98 |
| Conread position: | 103-395 |
| Cow position: | chr2:22618939-22618638 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 20, 71 |
| Conread position: | 217-391 |
| Cow position: | chr2:35464495-35464322 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 63, 22 |
| Conread position: | 225-369 |
| Cow position: | chr2:8251869-8252011 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 123, 17 |
| Conread position: | 233-398 |
| Cow position: | chr2:30925338-30925174 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 47, 7 |
Show alignments to all cow chromosomes.