Cow genome map
| Conread name: | Ss1.1-Bra1-PBL_15_E02.5 |
| Conread position: | 72-383 |
| Cow position: | chr21:30191829-30192132 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 15, 52 |
| Conread position: | 78-302 |
| Cow position: | chr21:8718986-8719217 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 49, 169 |
| Conread position: | 78-397 |
| Cow position: | chr21:12576308-12575987 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 32, 196 |
| Conread position: | 80-390 |
| Cow position: | chr21:30203225-30202904 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 41, 216 |
| Conread position: | 81-332 |
| Cow position: | chr21:39884363-39884101 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 35, 97 |
| Conread position: | 81-376 |
| Cow position: | chr21:35028727-35029035 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 13 |
| Conread position: | 84-403 |
| Cow position: | chr21:21225672-21225365 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 195, 32 |
| Conread position: | 87-339 |
| Cow position: | chr21:11444741-11444486 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 27, 145 |
| Conread position: | 87-372 |
| Cow position: | chr21:28731246-28730935 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 29, 91 |
| Conread position: | 88-371 |
| Cow position: | chr21:41458113-41458408 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 88-394 |
| Cow position: | chr21:18047773-18048077 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 204 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 26, 46 |
| Conread position: | 89-373 |
| Cow position: | chr21:5878604-5878898 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 37, 86 |
| Conread position: | 91-373 |
| Cow position: | chr21:40526461-40526754 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 22, 38 |
| Conread position: | 125-399 |
| Cow position: | chr21:41728576-41728865 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 60, 42 |
| Conread position: | 126-393 |
| Cow position: | chr21:5467800-5467535 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 7, 38 |
| Conread position: | 159-395 |
| Cow position: | chr21:16898634-16898875 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 120, 28 |
| Conread position: | 165-397 |
| Cow position: | chr21:34895442-34895219 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 17, 8 |
| Conread position: | 184-391 |
| Cow position: | chr21:12560203-12560410 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 93, 22 |
| Conread position: | 222-395 |
| Cow position: | chr21:42392177-42392004 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 58, 20 |
| Conread position: | 239-398 |
| Cow position: | chr21:11421040-11420882 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 41, 139 |
Show alignments to all cow chromosomes.