Cow genome map

Conread name: Ss1.1-Bra1-PBL_15_E02.5

Conread position: 55-373
Cow position: chr8:41411831-41411523 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 216
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 60, 20

Conread position: 70-361
Cow position: chr8:42818126-42817834 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 109

Conread position: 75-382
Cow position: chr8:16757139-16757451 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 211
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 39, 13

Conread position: 76-336
Cow position: chr8:25378515-25378770 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 191
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 43

Conread position: 78-397
Cow position: chr8:42120006-42120327 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 213
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 16

Conread position: 79-387
Cow position: chr8:18908376-18908069 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 206
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 111, 16

Conread position: 79-393
Cow position: chr8:24476851-24477166 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 152

Conread position: 79-396
Cow position: chr8:51442977-51443294 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 217
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 89

Conread position: 80-336
Cow position: chr8:46280146-46279882 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 39, 0

Conread position: 80-361
Cow position: chr8:42135111-42135377 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 203
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 37, 14

Conread position: 80-387
Cow position: chr8:55092197-55091883 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 204
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 148, 16

Conread position: 80-390
Cow position: chr8:54157270-54156970 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 220
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 104, 93

Conread position: 80-395
Cow position: chr8:9314334-9314017 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 220
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 12, 57

Conread position: 80-398
Cow position: chr8:27558110-27558427 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 231
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 156, 93

Conread position: 81-395
Cow position: chr8:26877725-26877396 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 231
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 24, 71

Conread position: 82-325
Cow position: chr8:4285587-4285836 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 187
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 29, 92

Conread position: 82-353
Cow position: chr8:11860478-11860757 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 198
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 146, 35

Conread position: 82-390
Cow position: chr8:23329641-23329332 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 216
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 66

Conread position: 84-311
Cow position: chr8:18387373-18387622 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 30, 0

Conread position: 85-378
Cow position: chr8:7546706-7547006 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 211
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 18, 194

Conread position: 85-387
Cow position: chr8:60323982-60324283 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 222
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 29, 83

Conread position: 85-391
Cow position: chr8:15516387-15516079 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 217
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 31, 94

Conread position: 88-395
Cow position: chr8:37691900-37691580 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 218
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 26, 57

Conread position: 88-399
Cow position: chr8:36608468-36608787 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 218
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 40, 91

Conread position: 95-383
Cow position: chr8:59472608-59472898 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 201
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 15, 81

Conread position: 95-401
Cow position: chr8:21946001-21945687 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 215
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 19, 81

Conread position: 112-395
Cow position: chr8:49684391-49684102 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 73, 61

Conread position: 119-376
Cow position: chr8:41939431-41939694 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 189
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 22, 155

Conread position: 122-341
Cow position: chr8:32174055-32173834 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 102, 0

Conread position: 125-399
Cow position: chr8:8723893-8724174 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 200
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 7, 31

Conread position: 128-392
Cow position: chr8:25157207-25156937 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 205
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 65, 39

Conread position: 146-395
Cow position: chr8:34662909-34662651 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 174
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 81, 27

Conread position: 155-392
Cow position: chr8:21813764-21813992 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 30, 18

Conread position: 158-390
Cow position: chr8:13559888-13559666 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 122, 16

Conread position: 198-398
Cow position: chr8:27501315-27501511 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 33, 85

Conread position: 213-391
Cow position: chr8:27076341-27076514 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 137, 58

Conread position: 215-397
Cow position: chr8:22519146-22518967 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 19, 99

Conread position: 217-402
Cow position: chr8:10994105-10994294 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 218-397
Cow position: chr8:23877218-23877401 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 235-399
Cow position: chr8:27534348-27534514 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 42, 0

Conread position: 236-395
Cow position: chr8:33062040-33061878 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 5, 142

Conread position: 239-395
Cow position: chr8:10844459-10844613 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 125
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 109, 20

Show alignments to all cow chromosomes.