Cow genome map
| Conread name: | Ss1.1-Bra1-PBL_15_E02.5 |
| Conread position: | 52-395 |
| Cow position: | chr9:44445942-44446299 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 245 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 58, 108 |
| Conread position: | 64-326 |
| Cow position: | chr9:7054443-7054178 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 13, 49 |
| Conread position: | 75-356 |
| Cow position: | chr9:35224386-35224674 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 13, 104 |
| Conread position: | 77-340 |
| Cow position: | chr9:43076606-43076333 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 39, 166 |
| Conread position: | 79-396 |
| Cow position: | chr9:39727281-39727609 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 35, 176 |
| Conread position: | 81-284 |
| Cow position: | chr9:50777508-50777293 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 81-393 |
| Cow position: | chr9:18767540-18767853 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 97, 36 |
| Conread position: | 81-399 |
| Cow position: | chr9:39742046-39742355 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 103, 31 |
| Conread position: | 85-397 |
| Cow position: | chr9:11045537-11045854 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 231 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 47, 31 |
| Conread position: | 87-358 |
| Cow position: | chr9:27961351-27961637 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 26, 59 |
| Conread position: | 89-399 |
| Cow position: | chr9:53574576-53574274 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 25, 118 |
| Conread position: | 95-386 |
| Cow position: | chr9:9579422-9579122 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 42, 12 |
| Conread position: | 97-361 |
| Cow position: | chr9:22939924-22940179 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 107, 7 |
| Conread position: | 112-337 |
| Cow position: | chr9:39002182-39002415 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 111, 177 |
| Conread position: | 112-386 |
| Cow position: | chr9:7328053-7327788 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 204 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 167, 42 |
| Conread position: | 116-392 |
| Cow position: | chr9:51335681-51335414 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 10, 42 |
| Conread position: | 122-396 |
| Cow position: | chr9:33078510-33078226 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 106, 51 |
| Conread position: | 128-308 |
| Cow position: | chr9:26479847-26480023 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 34, 44 |
| Conread position: | 143-395 |
| Cow position: | chr9:6389434-6389693 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 40, 189 |
| Conread position: | 165-392 |
| Cow position: | chr9:48373874-48374108 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 20, 8 |
| Conread position: | 210-361 |
| Cow position: | chr9:31540330-31540174 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 216-387 |
| Cow position: | chr9:43536907-43537078 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 66, 19 |
| Conread position: | 233-394 |
| Cow position: | chr9:23108070-23107911 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 115, 9 |
| Conread position: | 248-400 |
| Cow position: | chr9:36839075-36838923 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 100, 141 |
Show alignments to all cow chromosomes.