Cow genome map


           Conread name:
           Ss1.1-Bra1-olf_091_D02.5
        

               Conread position:
               4-197
               

               Cow position:
               chr14:3414800-3414991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               13, 47
               

               Conread position:
               193-265
               

               Cow position:
               chr14:3415056-3415128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               73
               

               Alignm identity:
               70
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               265-352
               

               Cow position:
               chr14:3415220-3415307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               88
               

               Alignm identity:
               78
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               339-450
               

               Cow position:
               chr14:3415363-3415475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               435-548
               

               Cow position:
               chr14:3415629-3415742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               94
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               548-698
               

               Cow position:
               chr14:3415810-3415961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               140
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               676-924
               

               Cow position:
               chr14:3416022-3416270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 7
               
Show alignments to all cow chromosomes.