Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-CorL-UMC-pd12cl-021-d03.3
        

               Conread position:
               1-191
               

               Cow position:
               chr1:666188-666387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               34, 143
               

               Conread position:
               1-191
               

               Cow position:
               chr1:78783374-78783569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               19, 118
               

               Conread position:
               1-203
               

               Cow position:
               chr1:22448759-22448548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               19, 70
               

               Conread position:
               1-227
               

               Cow position:
               chr1:82443629-82443396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               19, 147
               

               Conread position:
               1-230
               

               Cow position:
               chr1:100512423-100512673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               19, 181
               

               Conread position:
               1-248
               

               Cow position:
               chr1:68951459-68951707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               35, 142
               

               Conread position:
               1-250
               

               Cow position:
               chr1:102647441-102647192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               33, 60
               

               Conread position:
               1-273
               

               Cow position:
               chr1:43447995-43447742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               101, 33
               

               Conread position:
               1-277
               

               Cow position:
               chr1:81355876-81355592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               19, 59
               

               Conread position:
               1-278
               

               Cow position:
               chr1:8349483-8349213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               37, 111
               

               Conread position:
               1-278
               

               Cow position:
               chr1:32001493-32001210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               19, 151
               

               Conread position:
               1-278
               

               Cow position:
               chr1:40531282-40530992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               41, 190
               

               Conread position:
               1-278
               

               Cow position:
               chr1:52956087-52956362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               35, 19
               

               Conread position:
               1-278
               

               Cow position:
               chr1:72141392-72141683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               33, 210
               

               Conread position:
               1-278
               

               Cow position:
               chr1:78809711-78809987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               19, 70
               

               Conread position:
               1-278
               

               Cow position:
               chr1:84240727-84240991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               196
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               63, 53
               

               Conread position:
               1-296
               

               Cow position:
               chr1:36931987-36932284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               23, 59
               

               Conread position:
               1-296
               

               Cow position:
               chr1:90868611-90868312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               30, 145
               

               Conread position:
               1-297
               

               Cow position:
               chr1:21460695-21461001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               19, 206
               

               Conread position:
               1-306
               

               Cow position:
               chr1:84239279-84238983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               19, 31
               

               Conread position:
               1-309
               

               Cow position:
               chr1:45289046-45288725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               18, 60
               

               Conread position:
               1-326
               

               Cow position:
               chr1:24534415-24534093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               47, 25
               

               Conread position:
               1-338
               

               Cow position:
               chr1:95056883-95057224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               19, 63
               

               Conread position:
               1-349
               

               Cow position:
               chr1:43389220-43388863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               16, 54
               

               Conread position:
               1-350
               

               Cow position:
               chr1:71079129-71078770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               242
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               19, 72
               

               Conread position:
               1-351
               

               Cow position:
               chr1:6941293-6941659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               270
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               18, 61
               

               Conread position:
               1-351
               

               Cow position:
               chr1:6958706-6959072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               267
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               18, 61
               

               Conread position:
               1-351
               

               Cow position:
               chr1:34856801-34856432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 10
               

               Conread position:
               1-351
               

               Cow position:
               chr1:56229082-56229429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               19, 58
               

               Conread position:
               1-351
               

               Cow position:
               chr1:77720404-77720067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               244
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               19, 61
               

               Conread position:
               1-354
               

               Cow position:
               chr1:34686022-34686361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               245
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               19, 58
               

               Conread position:
               1-354
               

               Cow position:
               chr1:55357458-55357093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               19, 187
               

               Conread position:
               1-359
               

               Cow position:
               chr1:39427154-39426816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               251
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               191, 19
               

               Conread position:
               1-359
               

               Cow position:
               chr1:52052876-52052532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               240
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               195, 19
               

               Conread position:
               1-359
               

               Cow position:
               chr1:99609193-99609568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               271
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               19, 66
               

               Conread position:
               1-363
               

               Cow position:
               chr1:3923967-3923599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               262
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               19, 61
               

               Conread position:
               1-363
               

               Cow position:
               chr1:7739797-7740148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               192, 10
               

               Conread position:
               1-363
               

               Cow position:
               chr1:20667914-20667545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               257
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               19, 147
               

               Conread position:
               1-363
               

               Cow position:
               chr1:21577632-21578015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 143
               

               Conread position:
               1-363
               

               Cow position:
               chr1:42887435-42887075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               249
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               19, 94
               

               Conread position:
               1-363
               

               Cow position:
               chr1:43352829-43352448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 52
               

               Conread position:
               1-363
               

               Cow position:
               chr1:47658181-47658553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 73
               

               Conread position:
               1-363
               

               Cow position:
               chr1:54478152-54478521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               261
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               13, 70
               

               Conread position:
               1-363
               

               Cow position:
               chr1:56477422-56477790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 55
               

               Conread position:
               1-363
               

               Cow position:
               chr1:72011976-72011617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 16
               

               Conread position:
               1-363
               

               Cow position:
               chr1:74956196-74955827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 66
               

               Conread position:
               1-363
               

               Cow position:
               chr1:75744688-75745065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               255
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               19, 138
               

               Conread position:
               1-363
               

               Cow position:
               chr1:77462191-77462544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               13, 60
               

               Conread position:
               1-363
               

               Cow position:
               chr1:81290338-81290709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               30, 109
               

               Conread position:
               1-363
               

               Cow position:
               chr1:90976255-90975871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               269
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               35, 140
               

               Conread position:
               1-363
               

               Cow position:
               chr1:91066321-91065952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 70
               

               Conread position:
               1-363
               

               Cow position:
               chr1:95100789-95101156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               19, 65
               

               Conread position:
               1-363
               

               Cow position:
               chr1:102756598-102756231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               252
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               18, 143
               

               Conread position:
               1-364
               

               Cow position:
               chr1:56225303-56225672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               47, 19
               

               Conread position:
               1-365
               

               Cow position:
               chr1:12464836-12464458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               256
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               19, 136
               

               Conread position:
               1-365
               

               Cow position:
               chr1:53374263-53374635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 59
               

               Conread position:
               1-365
               

               Cow position:
               chr1:68817971-68817593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               263
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               19, 61
               

               Conread position:
               1-365
               

               Cow position:
               chr1:101713954-101714323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               149, 10
               

               Conread position:
               1-367
               

               Cow position:
               chr1:15547296-15547674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               263
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               15, 152
               

               Conread position:
               1-367
               

               Cow position:
               chr1:21954390-21954017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               262
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               28, 35
               

               Conread position:
               1-367
               

               Cow position:
               chr1:26895997-26895601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               23, 73
               

               Conread position:
               1-367
               

               Cow position:
               chr1:29935545-29935180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               251
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               35, 12
               

               Conread position:
               1-367
               

               Cow position:
               chr1:40599876-40600234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               250
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               33, 10
               

               Conread position:
               1-367
               

               Cow position:
               chr1:42398369-42397986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 142
               

               Conread position:
               1-367
               

               Cow position:
               chr1:49317669-49317291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 149
               

               Conread position:
               1-367
               

               Cow position:
               chr1:50931142-50930770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               261
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               39, 19
               

               Conread position:
               1-367
               

               Cow position:
               chr1:54199556-54199187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               269
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               16, 150
               

               Conread position:
               1-367
               

               Cow position:
               chr1:73584575-73584195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               263
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               65, 30
               

               Conread position:
               1-367
               

               Cow position:
               chr1:78091864-78092250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               268
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               35, 135
               

               Conread position:
               1-367
               

               Cow position:
               chr1:96305140-96304764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               267
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               26, 51
               

               Conread position:
               1-367
               

               Cow position:
               chr1:97755349-97755709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               34, 153
               

               Conread position:
               1-368
               

               Cow position:
               chr1:2075500-2075140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               198, 30
               

               Conread position:
               1-368
               

               Cow position:
               chr1:71748179-71747824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               255
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               19, 105
               

               Conread position:
               1-369
               

               Cow position:
               chr1:65318409-65318789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 19
               

               Conread position:
               1-369
               

               Cow position:
               chr1:74084365-74083977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 215
               

               Conread position:
               1-369
               

               Cow position:
               chr1:82936754-82936394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               31, 69
               

               Conread position:
               1-370
               

               Cow position:
               chr1:70094174-70094551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               39, 10
               

               Conread position:
               1-370
               

               Cow position:
               chr1:102266439-102266058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               271
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               29, 16
               

               Conread position:
               1-372
               

               Cow position:
               chr1:46030525-46030150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               35, 70
               

               Conread position:
               1-372
               

               Cow position:
               chr1:76613298-76612919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               273
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               28, 111
               

               Conread position:
               1-372
               

               Cow position:
               chr1:100450357-100449979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               264
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               19, 115
               

               Conread position:
               2-257
               

               Cow position:
               chr1:4374506-4374246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               34, 58
               

               Conread position:
               2-283
               

               Cow position:
               chr1:91811620-91811894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               34, 93
               

               Conread position:
               2-296
               

               Cow position:
               chr1:39069122-39068825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               34, 58
               

               Conread position:
               2-363
               

               Cow position:
               chr1:51417605-51417970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 68
               

               Conread position:
               2-367
               

               Cow position:
               chr1:10942263-10941888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               262
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               18, 74
               

               Conread position:
               2-367
               

               Cow position:
               chr1:10964123-10964498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               261
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               18, 74
               

               Conread position:
               2-367
               

               Cow position:
               chr1:87072533-87072904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               263
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               70, 18
               

               Conread position:
               2-370
               

               Cow position:
               chr1:96964149-96964533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 61
               

               Conread position:
               2-372
               

               Cow position:
               chr1:54258396-54258782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 102
               

               Conread position:
               3-254
               

               Cow position:
               chr1:85596773-85597026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               17, 35
               

               Conread position:
               3-268
               

               Cow position:
               chr1:43703243-43703511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               33, 15
               

               Conread position:
               3-270
               

               Cow position:
               chr1:56634937-56635202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               189, 12
               

               Conread position:
               3-274
               

               Cow position:
               chr1:71643825-71643552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               27, 8
               

               Conread position:
               3-275
               

               Cow position:
               chr1:94261377-94261645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               28, 56
               

               Conread position:
               3-278
               

               Cow position:
               chr1:37309681-37309408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               17, 108
               

               Conread position:
               3-278
               

               Cow position:
               chr1:95215347-95215079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               33, 8
               

               Conread position:
               3-340
               

               Cow position:
               chr1:61735600-61735266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               230
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               33, 8
               

               Conread position:
               3-359
               

               Cow position:
               chr1:10778403-10778755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               256
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               12, 33
               

               Conread position:
               3-359
               

               Cow position:
               chr1:39418289-39417930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               252
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               10, 268
               

               Conread position:
               3-359
               

               Cow position:
               chr1:75382830-75383164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               33, 8
               

               Conread position:
               3-359
               

               Cow position:
               chr1:82337946-82337579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               257
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               28, 8
               

               Conread position:
               3-361
               

               Cow position:
               chr1:33331250-33330899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               237
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               30, 8
               

               Conread position:
               3-363
               

               Cow position:
               chr1:20544130-20544472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               27, 8
               

               Conread position:
               3-363
               

               Cow position:
               chr1:41696893-41697259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               249
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               33, 8
               

               Conread position:
               3-363
               

               Cow position:
               chr1:55429121-55428748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 8
               

               Conread position:
               3-363
               

               Cow position:
               chr1:59518750-59519116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               263
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               17, 71
               

               Conread position:
               3-363
               

               Cow position:
               chr1:87095396-87095008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               276
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               33, 12
               

               Conread position:
               3-365
               

               Cow position:
               chr1:35162242-35162612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               37, 12
               

               Conread position:
               3-365
               

               Cow position:
               chr1:100400363-100400000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               261
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               3-366
               

               Cow position:
               chr1:7442823-7443190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 12
               

               Conread position:
               3-366
               

               Cow position:
               chr1:51394254-51394626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               267
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               17, 68
               

               Conread position:
               3-366
               

               Cow position:
               chr1:55705415-55705039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               260
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               33, 10
               

               Conread position:
               3-367
               

               Cow position:
               chr1:1877866-1878233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               272
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               45, 12
               

               Conread position:
               3-367
               

               Cow position:
               chr1:18936995-18936627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 6
               

               Conread position:
               3-367
               

               Cow position:
               chr1:24133218-24132854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               69, 8
               

               Conread position:
               3-367
               

               Cow position:
               chr1:70422139-70422511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               260
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               39, 8
               

               Conread position:
               3-367
               

               Cow position:
               chr1:70538442-70538815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               27, 10
               

               Conread position:
               3-368
               

               Cow position:
               chr1:43340784-43340423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               258
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               30, 8
               

               Conread position:
               3-368
               

               Cow position:
               chr1:61391954-61391586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               31, 6
               

               Conread position:
               3-369
               

               Cow position:
               chr1:33719952-33720317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               29, 15
               

               Conread position:
               3-369
               

               Cow position:
               chr1:68619099-68618729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               246
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               33, 10
               

               Conread position:
               3-369
               

               Cow position:
               chr1:87888241-87888601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               261
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               225, 8
               

               Conread position:
               3-370
               

               Cow position:
               chr1:45019973-45019594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               37, 55
               

               Conread position:
               3-370
               

               Cow position:
               chr1:61884754-61885124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               259
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               33, 12
               

               Conread position:
               3-370
               

               Cow position:
               chr1:64804269-64803884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 8
               

               Conread position:
               3-370
               

               Cow position:
               chr1:86110897-86110533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               258
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               33, 64
               

               Conread position:
               3-370
               

               Cow position:
               chr1:89381109-89381485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               34, 10
               

               Conread position:
               3-371
               

               Cow position:
               chr1:81569196-81568816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               259
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               34, 8
               

               Conread position:
               3-372
               

               Cow position:
               chr1:5597362-5596998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               3-372
               

               Cow position:
               chr1:37322167-37321795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               33, 5
               

               Conread position:
               3-372
               

               Cow position:
               chr1:61564631-61564995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               33, 8
               

               Conread position:
               4-155
               

               Cow position:
               chr1:73536578-73536726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               44, 13
               

               Conread position:
               4-271
               

               Cow position:
               chr1:75933108-75933371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               27, 5
               

               Conread position:
               4-272
               

               Cow position:
               chr1:81868890-81868623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               32, 12
               

               Conread position:
               4-324
               

               Cow position:
               chr1:86578784-86579117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               227
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               16, 5
               

               Conread position:
               4-359
               

               Cow position:
               chr1:68827070-68826723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               32, 5
               

               Conread position:
               4-359
               

               Cow position:
               chr1:71045590-71045936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               28, 5
               

               Conread position:
               4-359
               

               Cow position:
               chr1:101632508-101632151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               247
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               16, 58
               

               Conread position:
               4-362
               

               Cow position:
               chr1:13548154-13547780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               267
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               18, 5
               

               Conread position:
               4-363
               

               Cow position:
               chr1:22525716-22526079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               248
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               201, 61
               

               Conread position:
               4-367
               

               Cow position:
               chr1:16061188-16060799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 126
               

               Conread position:
               4-367
               

               Cow position:
               chr1:55229820-55230183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               29, 8
               

               Conread position:
               4-369
               

               Cow position:
               chr1:44506803-44507180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 5
               

               Conread position:
               5-202
               

               Cow position:
               chr1:57264155-57263958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               38, 29
               

               Conread position:
               5-212
               

               Cow position:
               chr1:43380196-43379980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               15, 85
               

               Conread position:
               5-359
               

               Cow position:
               chr1:15050190-15050521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               45, 12
               

               Conread position:
               5-365
               

               Cow position:
               chr1:41289932-41289571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               248
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               5-367
               

               Cow position:
               chr1:10519207-10518820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               252
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               15, 159
               

               Conread position:
               5-369
               

               Cow position:
               chr1:5423903-5423521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               259
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               15, 68
               

               Conread position:
               6-175
               

               Cow position:
               chr1:45673548-45673720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               29, 6
               

               Conread position:
               6-361
               

               Cow position:
               chr1:48444352-48443988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 45
               

               Conread position:
               6-363
               

               Cow position:
               chr1:96365505-96365854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 50
               

               Conread position:
               8-273
               

               Cow position:
               chr1:77880892-77880627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               137, 57
               

               Conread position:
               8-367
               

               Cow position:
               chr1:76222852-76222513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               28, 73
               

               Conread position:
               9-278
               

               Cow position:
               chr1:4032465-4032743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               205
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               27, 117
               

               Conread position:
               9-329
               

               Cow position:
               chr1:76019851-76019526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               26, 72
               

               Conread position:
               9-343
               

               Cow position:
               chr1:99642528-99642184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               244
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               11, 64
               

               Conread position:
               9-354
               

               Cow position:
               chr1:23099739-23100078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               234
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               21, 49
               

               Conread position:
               9-354
               

               Cow position:
               chr1:68845646-68845310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 87
               

               Conread position:
               9-358
               

               Cow position:
               chr1:96472290-96472615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               35, 21
               

               Conread position:
               9-363
               

               Cow position:
               chr1:6166083-6166437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               9-363
               

               Cow position:
               chr1:7971261-7971609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               27, 51
               

               Conread position:
               9-363
               

               Cow position:
               chr1:36998032-36998387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               259
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               33, 103
               

               Conread position:
               9-363
               

               Cow position:
               chr1:58825388-58825726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               27, 47
               

               Conread position:
               9-363
               

               Cow position:
               chr1:86279254-86279622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               245
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               33, 83
               

               Conread position:
               9-363
               

               Cow position:
               chr1:97611813-97611468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               244
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               25, 49
               

               Conread position:
               9-367
               

               Cow position:
               chr1:72068998-72068624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 50
               

               Conread position:
               9-371
               

               Cow position:
               chr1:21955530-21955159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               260
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               12, 44
               

               Conread position:
               9-371
               

               Cow position:
               chr1:42545944-42545587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               253
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               55, 266
               

               Conread position:
               9-372
               

               Cow position:
               chr1:42175564-42175940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               246
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               21, 51
               

               Conread position:
               9-372
               

               Cow position:
               chr1:61742620-61742242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               265
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               15, 135
               

               Conread position:
               10-226
               

               Cow position:
               chr1:57396086-57395878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               35, 24
               

               Conread position:
               10-274
               

               Cow position:
               chr1:75141849-75142105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               54, 17
               

               Conread position:
               10-278
               

               Cow position:
               chr1:97231802-97232071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               16, 80
               

               Conread position:
               10-359
               

               Cow position:
               chr1:53520753-53521106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               34, 24
               

               Conread position:
               10-363
               

               Cow position:
               chr1:25383503-25383874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               248
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               23, 60
               

               Conread position:
               10-363
               

               Cow position:
               chr1:84282915-84283276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               14, 57
               

               Conread position:
               10-367
               

               Cow position:
               chr1:4691435-4691798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               30, 135
               

               Conread position:
               10-367
               

               Cow position:
               chr1:54206978-54206610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               26, 50
               

               Conread position:
               10-367
               

               Cow position:
               chr1:71227927-71228304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               24, 17
               

               Conread position:
               10-367
               

               Cow position:
               chr1:100324894-100324549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               253
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               183, 26
               

               Conread position:
               10-369
               

               Cow position:
               chr1:78857480-78857115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               24, 60
               

               Conread position:
               10-371
               

               Cow position:
               chr1:484625-484249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 113
               

               Conread position:
               10-371
               

               Cow position:
               chr1:88913164-88913533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               248
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               196, 55
               

               Conread position:
               10-371
               

               Cow position:
               chr1:101634551-101634912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               244
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               154, 17
               

               Conread position:
               10-372
               

               Cow position:
               chr1:90621664-90621292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               243
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               12, 33
               

               Conread position:
               10-372
               

               Cow position:
               chr1:101916011-101916385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               30, 138
               

               Conread position:
               11-298
               

               Cow position:
               chr1:76470494-76470776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               25, 136
               

               Conread position:
               12-189
               

               Cow position:
               chr1:85826189-85826366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               36, 45
               

               Conread position:
               13-351
               

               Cow position:
               chr1:11914028-11913688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               180, 14
               

               Conread position:
               13-363
               

               Cow position:
               chr1:20000901-20000551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               184, 14
               

               Conread position:
               13-363
               

               Cow position:
               chr1:70434847-70435191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               245
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               13-365
               

               Cow position:
               chr1:64678545-64678887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 89
               

               Conread position:
               13-365
               

               Cow position:
               chr1:102784808-102785153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               237
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               21, 17
               

               Conread position:
               14-372
               

               Cow position:
               chr1:53369054-53369412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               263
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               29, 17
               

               Conread position:
               16-359
               

               Cow position:
               chr1:89448747-89449099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               48, 38
               

               Conread position:
               18-203
               

               Cow position:
               chr1:51684652-51684841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               30, 39
               

               Conread position:
               18-209
               

               Cow position:
               chr1:81470981-81471172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               16, 40
               

               Conread position:
               18-273
               

               Cow position:
               chr1:88618446-88618703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               17, 87
               

               Conread position:
               18-274
               

               Cow position:
               chr1:16962161-16961902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               18, 127
               

               Conread position:
               18-278
               

               Cow position:
               chr1:57420879-57420625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               18, 127
               

               Conread position:
               18-278
               

               Cow position:
               chr1:74927729-74927995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               18, 79
               

               Conread position:
               18-278
               

               Cow position:
               chr1:89076784-89076522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               18, 129
               

               Conread position:
               18-296
               

               Cow position:
               chr1:97696589-97696873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               18, 55
               

               Conread position:
               18-351
               

               Cow position:
               chr1:102349903-102349566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               49, 115
               

               Conread position:
               18-352
               

               Cow position:
               chr1:53622811-53623148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               236
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               17, 12
               

               Conread position:
               18-358
               

               Cow position:
               chr1:15333730-15334088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               252
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               18, 202
               

               Conread position:
               18-359
               

               Cow position:
               chr1:6305016-6304676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               240
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               22, 129
               

               Conread position:
               18-359
               

               Cow position:
               chr1:28176852-28177181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               241
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               18, 127
               

               Conread position:
               18-359
               

               Cow position:
               chr1:41115866-41115535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               18, 52
               

               Conread position:
               18-361
               

               Cow position:
               chr1:93110773-93110429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               12, 158
               

               Conread position:
               18-363
               

               Cow position:
               chr1:874495-874868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               18, 109
               

               Conread position:
               18-363
               

               Cow position:
               chr1:21787179-21787529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               247
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               18, 40
               

               Conread position:
               18-363
               

               Cow position:
               chr1:22192612-22192975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               252
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               18, 106
               

               Conread position:
               18-363
               

               Cow position:
               chr1:22728900-22729259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               16, 52
               

               Conread position:
               18-363
               

               Cow position:
               chr1:23186946-23186597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               250
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               17, 75
               

               Conread position:
               18-363
               

               Cow position:
               chr1:31934363-31934709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               250
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               30, 119
               

               Conread position:
               18-363
               

               Cow position:
               chr1:34159684-34160033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               252
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               16, 9
               

               Conread position:
               18-363
               

               Cow position:
               chr1:72035077-72034723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 119
               

               Conread position:
               18-363
               

               Cow position:
               chr1:79165237-79164877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               254
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               18, 131
               

               Conread position:
               18-363
               

               Cow position:
               chr1:86682714-86682362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               19, 40
               

               Conread position:
               18-363
               

               Cow position:
               chr1:95176788-95177123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               232
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               18, 39
               

               Conread position:
               18-364
               

               Cow position:
               chr1:46036111-46035739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               18, 68
               

               Conread position:
               18-364
               

               Cow position:
               chr1:85028808-85029142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               234
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               15, 39
               

               Conread position:
               18-365
               

               Cow position:
               chr1:31608045-31607687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               17, 12
               

               Conread position:
               18-367
               

               Cow position:
               chr1:48580984-48581337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               251
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               175, 38
               

               Conread position:
               18-367
               

               Cow position:
               chr1:63434957-63434588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               253
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               18, 160
               

               Conread position:
               18-367
               

               Cow position:
               chr1:71119361-71119730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               264
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               22, 71
               

               Conread position:
               18-367
               

               Cow position:
               chr1:81228488-81228126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 92
               

               Conread position:
               18-371
               

               Cow position:
               chr1:42138719-42139053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               253
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               27, 39
               

               Conread position:
               18-372
               

               Cow position:
               chr1:19145069-19144721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               92, 33
               

               Conread position:
               18-372
               

               Cow position:
               chr1:24542730-24542356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               25, 50
               

               Conread position:
               18-372
               

               Cow position:
               chr1:62519206-62519580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               259
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               12, 183
               

               Conread position:
               18-372
               

               Cow position:
               chr1:78810888-78811253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               17, 94
               

               Conread position:
               19-347
               

               Cow position:
               chr1:93528544-93528883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               17, 133
               

               Conread position:
               19-349
               

               Cow position:
               chr1:96081334-96081669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               17, 75
               

               Conread position:
               19-350
               

               Cow position:
               chr1:31272591-31272261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               22, 39
               

               Conread position:
               19-351
               

               Cow position:
               chr1:11729031-11729365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               241
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               17, 39
               

               Conread position:
               19-361
               

               Cow position:
               chr1:19970751-19970391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               248
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               21, 103
               

               Conread position:
               19-372
               

               Cow position:
               chr1:38753767-38754131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 131
               

               Conread position:
               20-272
               

               Cow position:
               chr1:23512804-23512554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               16, 35
               

               Conread position:
               20-278
               

               Cow position:
               chr1:98594421-98594676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               43, 76
               

               Conread position:
               20-359
               

               Cow position:
               chr1:30047740-30047426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               22, 47
               

               Conread position:
               20-359
               

               Cow position:
               chr1:43872480-43872108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               259
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               15, 51
               

               Conread position:
               20-365
               

               Cow position:
               chr1:24909200-24908836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               246
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               22, 102
               

               Conread position:
               20-372
               

               Cow position:
               chr1:53369929-53370298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 84
               

               Conread position:
               21-286
               

               Cow position:
               chr1:64251197-64250933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               14, 9
               

               Conread position:
               22-359
               

               Cow position:
               chr1:39225069-39224738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               177, 33
               

               Conread position:
               22-372
               

               Cow position:
               chr1:91023615-91023254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               239
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               14, 48
               

               Conread position:
               23-273
               

               Cow position:
               chr1:85550219-85549971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               23, 11
               

               Conread position:
               23-371
               

               Cow position:
               chr1:89510063-89509718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               170, 10
               

               Conread position:
               24-349
               

               Cow position:
               chr1:17196771-17196434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               195, 32
               

               Conread position:
               24-370
               

               Cow position:
               chr1:44321741-44321385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               106, 8
               

               Conread position:
               26-369
               

               Cow position:
               chr1:47886627-47886271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 116
               

               Conread position:
               28-363
               

               Cow position:
               chr1:64572374-64572719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               243
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               7, 30
               

               Conread position:
               31-367
               

               Cow position:
               chr1:78838663-78838996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               14, 36
               

               Conread position:
               34-278
               

               Cow position:
               chr1:53308521-53308283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               11, 73
               

               Conread position:
               34-297
               

               Cow position:
               chr1:18780466-18780195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               33, 13
               

               Conread position:
               34-349
               

               Cow position:
               chr1:6228717-6228390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               38, 109
               

               Conread position:
               34-363
               

               Cow position:
               chr1:72731906-72732222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               89, 21
               

               Conread position:
               34-366
               

               Cow position:
               chr1:46839466-46839797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               21, 134
               

               Conread position:
               35-363
               

               Cow position:
               chr1:64302379-64302045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               10, 32
               

               Conread position:
               36-367
               

               Cow position:
               chr1:74319909-74319573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               156, 20
               

               Conread position:
               36-370
               

               Cow position:
               chr1:74929842-74929495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               243
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               141, 20
               

               Conread position:
               37-367
               

               Cow position:
               chr1:47790791-47790457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               236
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               161, 30
               

               Conread position:
               38-367
               

               Cow position:
               chr1:11172246-11172577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               10, 104
               

               Conread position:
               39-367
               

               Cow position:
               chr1:72105286-72105610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               241
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               189, 17
               

               Conread position:
               39-370
               

               Cow position:
               chr1:41181718-41182048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 97
               

               Conread position:
               41-189
               

               Cow position:
               chr1:41954371-41954222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               41-273
               

               Cow position:
               chr1:100569028-100569263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               23, 93
               

               Conread position:
               41-351
               

               Cow position:
               chr1:72813489-72813810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               232
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               70, 81
               

               Conread position:
               41-363
               

               Cow position:
               chr1:4243466-4243125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               71, 15
               

               Conread position:
               41-363
               

               Cow position:
               chr1:43505401-43505729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               104, 25
               

               Conread position:
               41-363
               

               Cow position:
               chr1:100551845-100552171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               69, 15
               

               Conread position:
               41-365
               

               Cow position:
               chr1:65025139-65025468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               31, 82
               

               Conread position:
               41-367
               

               Cow position:
               chr1:42869059-42868740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               81, 33
               

               Conread position:
               41-367
               

               Cow position:
               chr1:89742120-89741786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               239
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               152, 15
               

               Conread position:
               41-368
               

               Cow position:
               chr1:68862910-68863229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               231
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               42, 25
               

               Conread position:
               41-369
               

               Cow position:
               chr1:5010963-5010621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               31, 90
               

               Conread position:
               42-363
               

               Cow position:
               chr1:20104146-20104471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               151, 23
               

               Conread position:
               43-340
               

               Cow position:
               chr1:68276289-68276596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               21, 89
               

               Conread position:
               44-371
               

               Cow position:
               chr1:63992462-63992121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               7, 47
               

               Conread position:
               47-351
               

               Cow position:
               chr1:47288121-47288437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               87, 97
               

               Conread position:
               47-359
               

               Cow position:
               chr1:67585427-67585752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               6, 232
               

               Conread position:
               48-326
               

               Cow position:
               chr1:69695110-69694830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               136, 93
               

               Conread position:
               48-352
               

               Cow position:
               chr1:49082621-49082940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               16, 104
               

               Conread position:
               48-363
               

               Cow position:
               chr1:54156850-54156529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 69
               

               Conread position:
               48-363
               

               Cow position:
               chr1:56618770-56618451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               19, 97
               

               Conread position:
               48-367
               

               Cow position:
               chr1:25734750-25735077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               242
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               145, 81
               

               Conread position:
               48-371
               

               Cow position:
               chr1:71666049-71665720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               239
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               145, 24
               

               Conread position:
               50-371
               

               Cow position:
               chr1:635801-635471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               143, 82
               

               Conread position:
               51-367
               

               Cow position:
               chr1:3323756-3324083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               157, 56
               

               Conread position:
               52-285
               

               Cow position:
               chr1:30189032-30189272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               55, 68
               

               Conread position:
               53-333
               

               Cow position:
               chr1:79660515-79660223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               54, 69
               

               Conread position:
               53-359
               

               Cow position:
               chr1:5637190-5636871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               11, 80
               

               Conread position:
               53-363
               

               Cow position:
               chr1:100576152-100575836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               60, 24
               

               Conread position:
               53-370
               

               Cow position:
               chr1:31795119-31794795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               236
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               12, 38
               

               Conread position:
               55-273
               

               Cow position:
               chr1:43822289-43822506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               175, 81
               

               Conread position:
               55-278
               

               Cow position:
               chr1:92989478-92989701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               151, 77
               

               Conread position:
               55-362
               

               Cow position:
               chr1:43855190-43855493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               223
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               161, 90
               

               Conread position:
               55-363
               

               Cow position:
               chr1:627850-628173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               138, 77
               

               Conread position:
               55-363
               

               Cow position:
               chr1:56225681-56225987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               9, 36
               

               Conread position:
               55-363
               

               Cow position:
               chr1:78794337-78794031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               9, 78
               

               Conread position:
               55-363
               

               Cow position:
               chr1:86688266-86687956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               56, 43
               

               Conread position:
               55-371
               

               Cow position:
               chr1:79640402-79640076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               151, 96
               

               Conread position:
               56-286
               

               Cow position:
               chr1:61543029-61542798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               8, 86
               

               Conread position:
               56-354
               

               Cow position:
               chr1:81582011-81582291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               8, 53
               

               Conread position:
               56-355
               

               Cow position:
               chr1:19568738-19569052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               8, 83
               

               Conread position:
               56-360
               

               Cow position:
               chr1:22944137-22943826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               224
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               17, 75
               

               Conread position:
               56-367
               

               Cow position:
               chr1:42482092-42482410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               236
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               11, 75
               

               Conread position:
               56-371
               

               Cow position:
               chr1:3607700-3608007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               176, 108
               

               Conread position:
               58-360
               

               Cow position:
               chr1:16767191-16766884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               225
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               170, 78
               

               Conread position:
               58-363
               

               Cow position:
               chr1:6394443-6394762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               51, 30
               

               Conread position:
               59-367
               

               Cow position:
               chr1:37726522-37726204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               134, 35
               

               Conread position:
               63-278
               

               Cow position:
               chr1:58036916-58037129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               94, 18
               

               Conread position:
               63-367
               

               Cow position:
               chr1:4391386-4391058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               46, 57
               

               Conread position:
               64-363
               

               Cow position:
               chr1:22730643-22730938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               129, 51
               

               Conread position:
               64-367
               

               Cow position:
               chr1:29474453-29474142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               20, 76
               

               Conread position:
               64-370
               

               Cow position:
               chr1:49825172-49824853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               215
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               53, 59
               

               Conread position:
               65-372
               

               Cow position:
               chr1:78066643-78066328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               16, 70
               

               Conread position:
               66-353
               

               Cow position:
               chr1:24406994-24406719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               105, 68
               

               Conread position:
               66-358
               

               Cow position:
               chr1:42541496-42541791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               31, 71
               

               Conread position:
               66-363
               

               Cow position:
               chr1:22823805-22824114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 24
               

               Conread position:
               66-365
               

               Cow position:
               chr1:98583663-98583955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               133, 41
               

               Conread position:
               66-368
               

               Cow position:
               chr1:86062086-86061767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               54, 73
               

               Conread position:
               66-371
               

               Cow position:
               chr1:71350823-71350511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               122, 42
               

               Conread position:
               66-372
               

               Cow position:
               chr1:82513456-82513138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               133, 66
               

               Conread position:
               67-278
               

               Cow position:
               chr1:89835150-89835362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               126, 203
               

               Conread position:
               67-278
               

               Cow position:
               chr1:95153120-95153333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               64, 80
               

               Conread position:
               67-365
               

               Cow position:
               chr1:75250008-75250319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               226
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               10, 57
               

               Conread position:
               68-321
               

               Cow position:
               chr1:6972431-6972679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               130, 74
               

               Conread position:
               68-351
               

               Cow position:
               chr1:45223482-45223769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               131, 20
               

               Conread position:
               71-352
               

               Cow position:
               chr1:77425707-77425417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               87, 74
               

               Conread position:
               72-297
               

               Cow position:
               chr1:26616169-26615937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               70, 100
               

               Conread position:
               72-297
               

               Cow position:
               chr1:71796408-71796181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               75, 37
               

               Conread position:
               73-363
               

               Cow position:
               chr1:46030866-46031166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               124, 57
               

               Conread position:
               74-359
               

               Cow position:
               chr1:82880552-82880832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               205
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               154, 62
               

               Conread position:
               74-372
               

               Cow position:
               chr1:17875803-17875498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               154, 132
               

               Conread position:
               76-351
               

               Cow position:
               chr1:53327838-53327558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               116, 42
               

               Conread position:
               77-359
               

               Cow position:
               chr1:95618551-95618842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               203
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               20, 33
               

               Conread position:
               78-367
               

               Cow position:
               chr1:6854392-6854110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               9, 31
               

               Conread position:
               81-363
               

               Cow position:
               chr1:61846060-61846363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               118, 50
               

               Conread position:
               83-278
               

               Cow position:
               chr1:56832857-56832669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               110, 35
               

               Conread position:
               83-371
               

               Cow position:
               chr1:78079637-78079937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               113, 53
               

               Conread position:
               86-363
               

               Cow position:
               chr1:69227530-69227244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               63, 47
               

               Conread position:
               88-367
               

               Cow position:
               chr1:95829194-95828926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               179, 12
               

               Conread position:
               88-372
               

               Cow position:
               chr1:84812022-84811727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               5, 22
               

               Conread position:
               89-372
               

               Cow position:
               chr1:98467730-98468018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               99, 20
               

               Conread position:
               90-281
               

               Cow position:
               chr1:98575969-98576162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               103, 65
               

               Conread position:
               90-370
               

               Cow position:
               chr1:102753776-102754062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               102, 54
               

               Conread position:
               90-371
               

               Cow position:
               chr1:51533913-51533639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               109, 10
               

               Conread position:
               99-372
               

               Cow position:
               chr1:7229758-7229471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               78, 43
               

               Conread position:
               101-371
               

               Cow position:
               chr1:19515680-19515405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               91, 31
               

               Conread position:
               104-370
               

               Cow position:
               chr1:37695972-37695691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               89, 40
               

               Conread position:
               106-370
               

               Cow position:
               chr1:22035549-22035820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               87, 36
               

               Conread position:
               109-362
               

               Cow position:
               chr1:101507301-101507554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               56, 33
               

               Conread position:
               109-365
               

               Cow position:
               chr1:79718744-79719015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               36, 12
               

               Conread position:
               109-367
               

               Cow position:
               chr1:62235504-62235247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               119, 10
               

               Conread position:
               110-359
               

               Cow position:
               chr1:33998700-33998950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               118, 41
               

               Conread position:
               111-369
               

               Cow position:
               chr1:57053142-57053416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               38, 10
               

               Conread position:
               113-372
               

               Cow position:
               chr1:99322622-99322355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               32, 6
               

               Conread position:
               119-363
               

               Cow position:
               chr1:83887-84116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               119-365
               

               Cow position:
               chr1:62321866-62322094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               74, 22
               

               Conread position:
               119-365
               

               Cow position:
               chr1:77739668-77739931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               120-365
               

               Cow position:
               chr1:60044939-60045194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               41, 31
               

               Conread position:
               120-371
               

               Cow position:
               chr1:50432534-50432270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               67, 12
               

               Conread position:
               120-371
               

               Cow position:
               chr1:81390870-81391135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               202
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               25, 135
               

               Conread position:
               123-367
               

               Cow position:
               chr1:71790193-71789938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               70, 9
               

               Conread position:
               136-353
               

               Cow position:
               chr1:67114859-67115084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               144-367
               

               Cow position:
               chr1:528097-527873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               62, 36
               

               Conread position:
               144-368
               

               Cow position:
               chr1:67919109-67919338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               18, 26
               

               Conread position:
               145-359
               

               Cow position:
               chr1:86057096-86056877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               53, 19
               

               Conread position:
               145-363
               

               Cow position:
               chr1:8287655-8287425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               48, 121
               

               Conread position:
               145-363
               

               Cow position:
               chr1:31819086-31819308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               83, 61
               

               Conread position:
               145-365
               

               Cow position:
               chr1:81515208-81515446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               145-366
               

               Cow position:
               chr1:6731156-6731387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               145-369
               

               Cow position:
               chr1:1496557-1496315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               145-371
               

               Cow position:
               chr1:22637455-22637212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               8, 227
               

               Conread position:
               145-372
               

               Cow position:
               chr1:57089704-57089466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               48, 114
               

               Conread position:
               146-358
               

               Cow position:
               chr1:67529031-67529256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               53, 170
               

               Conread position:
               146-359
               

               Cow position:
               chr1:41027051-41027273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               146-359
               

               Cow position:
               chr1:73721336-73721565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               146-363
               

               Cow position:
               chr1:5006138-5006349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               11, 19
               

               Conread position:
               146-363
               

               Cow position:
               chr1:17055970-17056195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               53, 70
               

               Conread position:
               146-363
               

               Cow position:
               chr1:21560988-21561225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               146-363
               

               Cow position:
               chr1:72092647-72092418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               146-363
               

               Cow position:
               chr1:90267694-90267929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               14, 42
               

               Conread position:
               146-365
               

               Cow position:
               chr1:52139658-52139420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               46, 193
               

               Conread position:
               146-367
               

               Cow position:
               chr1:81481406-81481178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               60, 221
               

               Conread position:
               146-371
               

               Cow position:
               chr1:82537913-82538140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               81, 32
               

               Conread position:
               146-372
               

               Cow position:
               chr1:55753239-55753006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               41, 132
               

               Conread position:
               147-359
               

               Cow position:
               chr1:95835821-95835594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               147-363
               

               Cow position:
               chr1:6760057-6759839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               171
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               59, 22
               

               Conread position:
               147-364
               

               Cow position:
               chr1:38706877-38706647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               58, 196
               

               Conread position:
               147-367
               

               Cow position:
               chr1:54624906-54625131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               38, 135
               

               Conread position:
               147-367
               

               Cow position:
               chr1:72422431-72422196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               147-367
               

               Cow position:
               chr1:100823014-100823249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               10, 19
               

               Conread position:
               147-371
               

               Cow position:
               chr1:70175562-70175328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               66, 57
               

               Conread position:
               148-363
               

               Cow position:
               chr1:54267959-54267733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               148-370
               

               Cow position:
               chr1:4055430-4055657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               78, 57
               

               Conread position:
               149-361
               

               Cow position:
               chr1:70416781-70416557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               36, 21
               

               Conread position:
               149-363
               

               Cow position:
               chr1:88338646-88338855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               49, 120
               

               Conread position:
               149-370
               

               Cow position:
               chr1:50765591-50765827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               149-372
               

               Cow position:
               chr1:97144484-97144256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               77, 15
               

               Conread position:
               150-363
               

               Cow position:
               chr1:99570507-99570293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               40, 92
               

               Conread position:
               150-369
               

               Cow position:
               chr1:20871579-20871344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               33, 47
               

               Conread position:
               151-370
               

               Cow position:
               chr1:81858921-81858689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               151-372
               

               Cow position:
               chr1:81364243-81364475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               42, 15
               

               Conread position:
               152-351
               

               Cow position:
               chr1:38055513-38055313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               36, 14
               

               Conread position:
               152-367
               

               Cow position:
               chr1:852152-852384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               152-368
               

               Cow position:
               chr1:14006098-14006336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               152-372
               

               Cow position:
               chr1:53452519-53452735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               65, 54
               

               Conread position:
               164-348
               

               Cow position:
               chr1:22461244-22461049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               164-359
               

               Cow position:
               chr1:49980704-49980909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               35, 114
               

               Conread position:
               164-362
               

               Cow position:
               chr1:51860567-51860360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               38, 115
               

               Conread position:
               164-363
               

               Cow position:
               chr1:4444848-4444634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               164-363
               

               Cow position:
               chr1:33846575-33846365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               164-366
               

               Cow position:
               chr1:61011175-61011383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               29, 115
               

               Conread position:
               164-367
               

               Cow position:
               chr1:95152865-95153084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               164-371
               

               Cow position:
               chr1:242551-242763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               33, 208
               

               Conread position:
               164-372
               

               Cow position:
               chr1:14567641-14567426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               64, 123
               

               Conread position:
               164-372
               

               Cow position:
               chr1:45315642-45315418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               42, 218
               

               Conread position:
               169-362
               

               Cow position:
               chr1:6440550-6440342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               169-365
               

               Cow position:
               chr1:6790774-6790981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               19, 26
               

               Conread position:
               169-370
               

               Cow position:
               chr1:101007430-101007223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               27, 47
               

               Conread position:
               169-371
               

               Cow position:
               chr1:102768180-102768390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               59, 38
               

               Conread position:
               169-372
               

               Cow position:
               chr1:21131118-21130916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               24, 114
               

               Conread position:
               170-363
               

               Cow position:
               chr1:4294344-4294550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               40, 168
               

               Conread position:
               170-363
               

               Cow position:
               chr1:48618244-48618042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               49, 36
               

               Conread position:
               170-363
               

               Cow position:
               chr1:56913529-56913327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               170-370
               

               Cow position:
               chr1:23969053-23968852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               57, 19
               

               Conread position:
               171-371
               

               Cow position:
               chr1:7793520-7793319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               22, 40
               

               Conread position:
               171-372
               

               Cow position:
               chr1:32014199-32014406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               17, 24
               

               Conread position:
               172-367
               

               Cow position:
               chr1:82336680-82336881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               172-372
               

               Cow position:
               chr1:76739908-76739698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               26, 155
               

               Conread position:
               173-363
               

               Cow position:
               chr1:56719344-56719545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               5, 23
               

               Conread position:
               173-366
               

               Cow position:
               chr1:25022072-25021870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               174-363
               

               Cow position:
               chr1:91937722-91937918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               174-367
               

               Cow position:
               chr1:47468075-47467869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               14, 20
               

               Conread position:
               174-371
               

               Cow position:
               chr1:67674598-67674395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               32, 18
               

               Conread position:
               175-360
               

               Cow position:
               chr1:89437709-89437526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               53, 18
               

               Conread position:
               175-363
               

               Cow position:
               chr1:61146124-61146322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               6, 90
               

               Conread position:
               175-363
               

               Cow position:
               chr1:87149810-87149611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               175-369
               

               Cow position:
               chr1:47969256-47969451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               52, 30
               

               Conread position:
               176-367
               

               Cow position:
               chr1:27793040-27792847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               21, 101
               

               Conread position:
               177-363
               

               Cow position:
               chr1:14137894-14137700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               177-367
               

               Cow position:
               chr1:20537214-20537412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               12, 18
               

               Conread position:
               177-367
               

               Cow position:
               chr1:40303558-40303757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               177-369
               

               Cow position:
               chr1:90840622-90840822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               30, 108
               

               Conread position:
               177-370
               

               Cow position:
               chr1:63994548-63994343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               168
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               177-370
               

               Cow position:
               chr1:71664887-71664681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               56, 13
               

               Conread position:
               177-370
               

               Cow position:
               chr1:91912347-91912546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               177-371
               

               Cow position:
               chr1:34001054-34001256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               16, 103
               

               Conread position:
               177-371
               

               Cow position:
               chr1:97536295-97536492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               14, 110
               

               Conread position:
               177-372
               

               Cow position:
               chr1:1489395-1489191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               16, 34
               

               Conread position:
               178-360
               

               Cow position:
               chr1:69411690-69411493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               13, 158
               

               Conread position:
               178-367
               

               Cow position:
               chr1:74760945-74761141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               179-359
               

               Cow position:
               chr1:19031290-19031121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               49, 15
               

               Conread position:
               179-363
               

               Cow position:
               chr1:85622538-85622737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               179-363
               

               Cow position:
               chr1:99637245-99637046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               14, 96
               

               Conread position:
               179-367
               

               Cow position:
               chr1:65030076-65030279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               179-369
               

               Cow position:
               chr1:9478609-9478405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               49, 14
               

               Conread position:
               179-369
               

               Cow position:
               chr1:15628293-15628491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               9, 16
               

               Conread position:
               179-370
               

               Cow position:
               chr1:49297662-49297863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               9, 16
               

               Conread position:
               179-370
               

               Cow position:
               chr1:58420214-58420411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               9, 16
               

               Conread position:
               180-352
               

               Cow position:
               chr1:81638558-81638733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               13, 95
               

               Conread position:
               180-363
               

               Cow position:
               chr1:63460888-63461083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               181-349
               

               Cow position:
               chr1:52370160-52369990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               24, 120
               

               Conread position:
               182-347
               

               Cow position:
               chr1:69532511-69532337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               17, 97
               

               Conread position:
               182-351
               

               Cow position:
               chr1:63905245-63905071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               7, 13
               

               Conread position:
               182-366
               

               Cow position:
               chr1:95703819-95704013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               6, 13
               

               Conread position:
               182-367
               

               Cow position:
               chr1:15875672-15875870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               183-355
               

               Cow position:
               chr1:79631518-79631337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               45, 7
               

               Conread position:
               183-361
               

               Cow position:
               chr1:68710294-68710487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               45, 11
               

               Conread position:
               184-367
               

               Cow position:
               chr1:32217259-32217448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               46, 12
               

               Conread position:
               186-363
               

               Cow position:
               chr1:46004300-46004479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               42, 8
               

               Conread position:
               187-363
               

               Cow position:
               chr1:53442092-53441910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               41, 7
               

               Conread position:
               189-370
               

               Cow position:
               chr1:60403788-60403981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               39, 5
               

               Conread position:
               189-371
               

               Cow position:
               chr1:22828548-22828362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               39, 7
               

               Conread position:
               193-360
               

               Cow position:
               chr1:77857692-77857859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               35, 58
               

               Conread position:
               193-362
               

               Cow position:
               chr1:13157216-13157398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               193-365
               

               Cow position:
               chr1:68696445-68696619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               33, 52
               

               Conread position:
               193-370
               

               Cow position:
               chr1:71345883-71346064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               37, 23
               

               Conread position:
               193-372
               

               Cow position:
               chr1:84141679-84141871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               194-362
               

               Cow position:
               chr1:70044379-70044548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               34, 78
               

               Conread position:
               194-367
               

               Cow position:
               chr1:46245714-46245526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               31, 53
               

               Conread position:
               194-372
               

               Cow position:
               chr1:74919953-74919761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               194-372
               

               Cow position:
               chr1:97986423-97986231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               34, 186
               

               Conread position:
               195-363
               

               Cow position:
               chr1:100800742-100800564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               195-365
               

               Cow position:
               chr1:22147255-22147424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               78, 31
               

               Conread position:
               195-365
               

               Cow position:
               chr1:42152451-42152282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               33, 66
               

               Conread position:
               195-367
               

               Cow position:
               chr1:94713138-94712953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               195-371
               

               Cow position:
               chr1:83677297-83677111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               195-372
               

               Cow position:
               chr1:57087875-57088065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               33, 175
               

               Conread position:
               196-366
               

               Cow position:
               chr1:53456839-53457020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               197-363
               

               Cow position:
               chr1:87934242-87934075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               31, 80
               

               Conread position:
               199-365
               

               Cow position:
               chr1:64421572-64421743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               29, 137
               

               Conread position:
               200-363
               

               Cow position:
               chr1:89146842-89146667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               28, 20
               

               Conread position:
               200-371
               

               Cow position:
               chr1:90879704-90879528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               28, 157
               

               Conread position:
               204-359
               

               Cow position:
               chr1:69442482-69442314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               207-363
               

               Cow position:
               chr1:69250473-69250637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               21, 104
               

               Conread position:
               207-367
               

               Cow position:
               chr1:42796916-42797086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               21, 146
               

               Conread position:
               207-371
               

               Cow position:
               chr1:26984048-26984226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               207-371
               

               Cow position:
               chr1:43379323-43379150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               17, 169
               

               Conread position:
               208-367
               

               Cow position:
               chr1:36237821-36237990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               67, 34
               

               Conread position:
               209-363
               

               Cow position:
               chr1:771738-771584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               19, 5
               

               Conread position:
               210-357
               

               Cow position:
               chr1:96362383-96362239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               18, 8
               

               Conread position:
               210-359
               

               Cow position:
               chr1:84787312-84787461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               18, 63
               

               Conread position:
               214-349
               

               Cow position:
               chr1:45505881-45505741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               214-363
               

               Cow position:
               chr1:1915978-1915822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               214-363
               

               Cow position:
               chr1:75227274-75227120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               14, 58
               

               Conread position:
               214-365
               

               Cow position:
               chr1:85339430-85339584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               14, 63
               

               Conread position:
               214-367
               

               Cow position:
               chr1:3685640-3685799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               13, 57
               

               Conread position:
               214-371
               

               Cow position:
               chr1:41022465-41022630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               217-359
               

               Cow position:
               chr1:40284590-40284448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               11, 61
               

               Conread position:
               218-362
               

               Cow position:
               chr1:71636273-71636124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               218-367
               

               Cow position:
               chr1:34767341-34767503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               59, 19
               

               Conread position:
               218-372
               

               Cow position:
               chr1:20202356-20202513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               56, 7
               

               Conread position:
               223-363
               

               Cow position:
               chr1:36887270-36887125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               223-368
               

               Cow position:
               chr1:41138087-41137938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               224-363
               

               Cow position:
               chr1:69340267-69340404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               225-371
               

               Cow position:
               chr1:50906621-50906468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               226-367
               

               Cow position:
               chr1:11770176-11770033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               229-363
               

               Cow position:
               chr1:53474219-53474353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               60, 11
               

               Conread position:
               229-365
               

               Cow position:
               chr1:71321937-71321796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               229-366
               

               Cow position:
               chr1:62182067-62181931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               230-367
               

               Cow position:
               chr1:51626725-51626587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               233-363
               

               Cow position:
               chr1:45680342-45680473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               66, 42
               

               Conread position:
               235-370
               

               Cow position:
               chr1:45233060-45233195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               239-368
               

               Cow position:
               chr1:8133996-8134135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               239-372
               

               Cow position:
               chr1:34952316-34952455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               46, 23
               

               Conread position:
               243-358
               

               Cow position:
               chr1:80733079-80733195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               57, 27
               

               Conread position:
               243-363
               

               Cow position:
               chr1:8778258-8778133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               245-372
               

               Cow position:
               chr1:43734520-43734393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               47, 22
               

               Conread position:
               248-372
               

               Cow position:
               chr1:40069231-40069355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               36, 17
               

               Conread position:
               255-363
               

               Cow position:
               chr1:10610572-10610467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               263-365
               

               Cow position:
               chr1:80312143-80312041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               263-372
               

               Cow position:
               chr1:5872669-5872560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               263-372
               

               Cow position:
               chr1:73576783-73576890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               269-363
               

               Cow position:
               chr1:79178742-79178836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               79
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               269-365
               

               Cow position:
               chr1:100513008-100513104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               269-367
               

               Cow position:
               chr1:25699125-25699224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               83
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               269-367
               

               Cow position:
               chr1:67160176-67160077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               86, 65
               

               Conread position:
               269-367
               

               Cow position:
               chr1:71650581-71650680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               83
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               269-368
               

               Cow position:
               chr1:5766991-5767091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               269-372
               

               Cow position:
               chr1:24876627-24876732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               270-365
               

               Cow position:
               chr1:86503247-86503153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               81
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               270-365
               

               Cow position:
               chr1:95712669-95712764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               83
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               270-367
               

               Cow position:
               chr1:79038227-79038324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               83
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               270-369
               

               Cow position:
               chr1:36306790-36306890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               270-369
               

               Cow position:
               chr1:95513952-95514052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               270-372
               

               Cow position:
               chr1:47742806-47742907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               21, 69
               

               Conread position:
               270-372
               

               Cow position:
               chr1:98374079-98374180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               91, 30
               

               Conread position:
               271-371
               

               Cow position:
               chr1:4303326-4303225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               87
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               271-371
               

               Cow position:
               chr1:78236606-78236707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               85
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               273-370
               

               Cow position:
               chr1:19066892-19066796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               82
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               273-372
               

               Cow position:
               chr1:14067328-14067228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               281-369
               

               Cow position:
               chr1:11226105-11226018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               89
               

               Alignm identity:
               78
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-191
Cow position:	chr1:666188-666387 (view UCSC Genome Browser custom track)
Alignm length:	203
Alignm identity:	147
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	34, 143
Conread position:	1-203
Cow position:	chr1:22448759-22448548 (view UCSC Genome Browser custom track)
Alignm length:	213
Alignm identity:	160
Alignm E-value:	4e-34
Alignm gaps (pig, cow):	19, 70
Conread position:	1-227
Cow position:	chr1:82443629-82443396 (view UCSC Genome Browser custom track)
Alignm length:	237
Alignm identity:	166
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	19, 147
Conread position:	1-230
Cow position:	chr1:100512423-100512673 (view UCSC Genome Browser custom track)
Alignm length:	252
Alignm identity:	179
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	19, 181
Conread position:	1-248
Cow position:	chr1:68951459-68951707 (view UCSC Genome Browser custom track)
Alignm length:	253
Alignm identity:	170
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	35, 142
Conread position:	1-250
Cow position:	chr1:102647441-102647192 (view UCSC Genome Browser custom track)
Alignm length:	257
Alignm identity:	176
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	33, 60
Conread position:	1-273
Cow position:	chr1:43447995-43447742 (view UCSC Genome Browser custom track)
Alignm length:	274
Alignm identity:	194
Alignm E-value:	3e-30
Alignm gaps (pig, cow):	101, 33
Conread position:	1-277
Cow position:	chr1:81355876-81355592 (view UCSC Genome Browser custom track)
Alignm length:	288
Alignm identity:	198
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	19, 59
Conread position:	1-278
Cow position:	chr1:8349483-8349213 (view UCSC Genome Browser custom track)
Alignm length:	283
Alignm identity:	203
Alignm E-value:	2e-35
Alignm gaps (pig, cow):	37, 111
Conread position:	1-296
Cow position:	chr1:36931987-36932284 (view UCSC Genome Browser custom track)
Alignm length:	306
Alignm identity:	203
Alignm E-value:	5e-24
Alignm gaps (pig, cow):	23, 59
Conread position:	1-297
Cow position:	chr1:21460695-21461001 (view UCSC Genome Browser custom track)
Alignm length:	312
Alignm identity:	215
Alignm E-value:	3e-30
Alignm gaps (pig, cow):	19, 206
Conread position:	1-306
Cow position:	chr1:84239279-84238983 (view UCSC Genome Browser custom track)
Alignm length:	311
Alignm identity:	207
Alignm E-value:	5e-25
Alignm gaps (pig, cow):	19, 31
Conread position:	1-309
Cow position:	chr1:45289046-45288725 (view UCSC Genome Browser custom track)
Alignm length:	326
Alignm identity:	226
Alignm E-value:	1e-34
Alignm gaps (pig, cow):	18, 60
Conread position:	1-326
Cow position:	chr1:24534415-24534093 (view UCSC Genome Browser custom track)
Alignm length:	334
Alignm identity:	220
Alignm E-value:	6e-26
Alignm gaps (pig, cow):	47, 25
Conread position:	1-338
Cow position:	chr1:95056883-95057224 (view UCSC Genome Browser custom track)
Alignm length:	355
Alignm identity:	236
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	19, 63
Conread position:	1-349
Cow position:	chr1:43389220-43388863 (view UCSC Genome Browser custom track)
Alignm length:	365
Alignm identity:	245
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	16, 54
Conread position:	1-350
Cow position:	chr1:71079129-71078770 (view UCSC Genome Browser custom track)
Alignm length:	369
Alignm identity:	242
Alignm E-value:	6e-26
Alignm gaps (pig, cow):	19, 72
Conread position:	1-351
Cow position:	chr1:6941293-6941659 (view UCSC Genome Browser custom track)
Alignm length:	376
Alignm identity:	270
Alignm E-value:	9.94922e-44
Alignm gaps (pig, cow):	18, 61
Conread position:	1-354
Cow position:	chr1:34686022-34686361 (view UCSC Genome Browser custom track)
Alignm length:	361
Alignm identity:	245
Alignm E-value:	9e-31
Alignm gaps (pig, cow):	19, 58
Conread position:	1-359
Cow position:	chr1:39427154-39426816 (view UCSC Genome Browser custom track)
Alignm length:	363
Alignm identity:	251
Alignm E-value:	5e-36
Alignm gaps (pig, cow):	191, 19