Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-CorL-UMC-pd12cl-021-d03.3
        

               Conread position:
               1-173
               

               Cow position:
               chr11:43914024-43914195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               156, 131
               

               Conread position:
               1-181
               

               Cow position:
               chr11:77241176-77241358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               21, 61
               

               Conread position:
               1-188
               

               Cow position:
               chr11:81614830-81614645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               34, 8
               

               Conread position:
               1-189
               

               Cow position:
               chr11:62808846-62808656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               19, 148
               

               Conread position:
               1-203
               

               Cow position:
               chr11:9837294-9837089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               32, 150
               

               Conread position:
               1-203
               

               Cow position:
               chr11:17112824-17112621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               33, 104
               

               Conread position:
               1-220
               

               Cow position:
               chr11:81174692-81174913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               19, 65
               

               Conread position:
               1-226
               

               Cow position:
               chr11:27386537-27386304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               1-271
               

               Cow position:
               chr11:52983493-52983757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               58, 35
               

               Conread position:
               1-273
               

               Cow position:
               chr11:44642483-44642208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               13, 63
               

               Conread position:
               1-274
               

               Cow position:
               chr11:26483521-26483791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               35, 144
               

               Conread position:
               1-274
               

               Cow position:
               chr11:36659010-36658737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               30, 64
               

               Conread position:
               1-274
               

               Cow position:
               chr11:73512621-73512358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               47, 98
               

               Conread position:
               1-278
               

               Cow position:
               chr11:34032395-34032111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               34, 68
               

               Conread position:
               1-278
               

               Cow position:
               chr11:36799496-36799220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               30, 142
               

               Conread position:
               1-278
               

               Cow position:
               chr11:63482623-63482342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               19, 64
               

               Conread position:
               1-278
               

               Cow position:
               chr11:67246607-67246873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               196, 19
               

               Conread position:
               1-311
               

               Cow position:
               chr11:38874600-38874285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               235
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               19, 64
               

               Conread position:
               1-350
               

               Cow position:
               chr11:34113074-34113431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               35, 11
               

               Conread position:
               1-350
               

               Cow position:
               chr11:85723504-85723864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               259
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               19, 31
               

               Conread position:
               1-351
               

               Cow position:
               chr11:60302155-60301806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               261
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               19, 63
               

               Conread position:
               1-352
               

               Cow position:
               chr11:22978057-22977710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               248
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               36, 69
               

               Conread position:
               1-352
               

               Cow position:
               chr11:48474510-48474881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               35, 60
               

               Conread position:
               1-357
               

               Cow position:
               chr11:14470178-14470538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               33, 7
               

               Conread position:
               1-357
               

               Cow position:
               chr11:18572606-18572960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               19, 73
               

               Conread position:
               1-359
               

               Cow position:
               chr11:18484357-18484022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               257
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               30, 65
               

               Conread position:
               1-359
               

               Cow position:
               chr11:33348382-33348020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               262
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               19, 149
               

               Conread position:
               1-359
               

               Cow position:
               chr11:48544245-48544615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               30, 69
               

               Conread position:
               1-359
               

               Cow position:
               chr11:49148851-49149225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               267
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               1-363
               

               Cow position:
               chr11:6234076-6233695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               266
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               18, 64
               

               Conread position:
               1-363
               

               Cow position:
               chr11:29960107-29960475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               237
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               45, 14
               

               Conread position:
               1-363
               

               Cow position:
               chr11:41549532-41549155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               264
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               19, 73
               

               Conread position:
               1-363
               

               Cow position:
               chr11:42083282-42083636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               261
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               25, 98
               

               Conread position:
               1-363
               

               Cow position:
               chr11:48932781-48932406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               19, 64
               

               Conread position:
               1-365
               

               Cow position:
               chr11:62620187-62620561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               249
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               23, 63
               

               Conread position:
               1-365
               

               Cow position:
               chr11:63469685-63470043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               246
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               22, 52
               

               Conread position:
               1-368
               

               Cow position:
               chr11:68910040-68909664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 10
               

               Conread position:
               1-370
               

               Cow position:
               chr11:76369716-76369339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               261
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               19, 60
               

               Conread position:
               1-370
               

               Cow position:
               chr11:78381244-78380878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 57
               

               Conread position:
               1-371
               

               Cow position:
               chr11:77745448-77745055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               1-372
               

               Cow position:
               chr11:19247392-19247012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 115
               

               Conread position:
               1-372
               

               Cow position:
               chr11:26117914-26117546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               266
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               55, 135
               

               Conread position:
               1-372
               

               Cow position:
               chr11:65762794-65762393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               268
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               19, 61
               

               Conread position:
               1-372
               

               Cow position:
               chr11:68912945-68913335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 143
               

               Conread position:
               2-367
               

               Cow position:
               chr11:2083951-2084334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 25
               

               Conread position:
               2-368
               

               Cow position:
               chr11:36182492-36182879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               259
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               14, 71
               

               Conread position:
               2-372
               

               Cow position:
               chr11:61427416-61427762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               25, 55
               

               Conread position:
               3-189
               

               Cow position:
               chr11:63516637-63516823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               33, 8
               

               Conread position:
               3-191
               

               Cow position:
               chr11:68570868-68570671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               17, 153
               

               Conread position:
               3-197
               

               Cow position:
               chr11:18399522-18399324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               31, 146
               

               Conread position:
               3-272
               

               Cow position:
               chr11:64638719-64638443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               3-273
               

               Cow position:
               chr11:48272008-48272284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               33, 8
               

               Conread position:
               3-278
               

               Cow position:
               chr11:30924957-30925242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               17, 99
               

               Conread position:
               3-278
               

               Cow position:
               chr11:80530175-80530446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               33, 139
               

               Conread position:
               3-320
               

               Cow position:
               chr11:18244128-18243805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               31, 8
               

               Conread position:
               3-326
               

               Cow position:
               chr11:36112231-36112564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               235
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               32, 82
               

               Conread position:
               3-331
               

               Cow position:
               chr11:82940812-82940474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               33, 58
               

               Conread position:
               3-347
               

               Cow position:
               chr11:83066308-83066659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               45, 12
               

               Conread position:
               3-349
               

               Cow position:
               chr11:34145103-34144750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               254
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               34, 8
               

               Conread position:
               3-352
               

               Cow position:
               chr11:2907708-2907362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               33, 8
               

               Conread position:
               3-357
               

               Cow position:
               chr11:55761691-55762033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               29, 8
               

               Conread position:
               3-359
               

               Cow position:
               chr11:21844322-21843960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               27, 5
               

               Conread position:
               3-360
               

               Cow position:
               chr11:8525300-8524938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               32, 8
               

               Conread position:
               3-361
               

               Cow position:
               chr11:68841015-68841390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               45, 8
               

               Conread position:
               3-362
               

               Cow position:
               chr11:17227835-17227470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               31, 6
               

               Conread position:
               3-362
               

               Cow position:
               chr11:41271952-41272300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               33, 12
               

               Conread position:
               3-363
               

               Cow position:
               chr11:20238487-20238859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               141, 8
               

               Conread position:
               3-363
               

               Cow position:
               chr11:27746734-27747101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               21, 8
               

               Conread position:
               3-363
               

               Cow position:
               chr11:35580067-35580444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               27, 55
               

               Conread position:
               3-363
               

               Cow position:
               chr11:41986239-41985865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 94
               

               Conread position:
               3-363
               

               Cow position:
               chr11:42016825-42016456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               263
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               33, 8
               

               Conread position:
               3-365
               

               Cow position:
               chr11:13592547-13592925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 6
               

               Conread position:
               3-365
               

               Cow position:
               chr11:41215557-41215918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               266
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               190, 8
               

               Conread position:
               3-366
               

               Cow position:
               chr11:64044052-64044403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               33, 8
               

               Conread position:
               3-367
               

               Cow position:
               chr11:56728760-56729123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               249
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               37, 8
               

               Conread position:
               3-369
               

               Cow position:
               chr11:19592184-19591806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 9
               

               Conread position:
               3-369
               

               Cow position:
               chr11:62490247-62490610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               123, 8
               

               Conread position:
               3-370
               

               Cow position:
               chr11:28367515-28367901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               34, 8
               

               Conread position:
               3-371
               

               Cow position:
               chr11:50153005-50152622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               33, 8
               

               Conread position:
               3-371
               

               Cow position:
               chr11:63434245-63433875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               31, 12
               

               Conread position:
               4-200
               

               Cow position:
               chr11:53130622-53130820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               32, 5
               

               Conread position:
               4-241
               

               Cow position:
               chr11:30120851-30120610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               134, 5
               

               Conread position:
               4-295
               

               Cow position:
               chr11:53511894-53512188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               32, 16
               

               Conread position:
               4-363
               

               Cow position:
               chr11:49152763-49153123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 5
               

               Conread position:
               4-363
               

               Cow position:
               chr11:66188510-66188138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               30, 54
               

               Conread position:
               4-365
               

               Cow position:
               chr11:75480216-75479838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 368
               

               Conread position:
               4-367
               

               Cow position:
               chr11:30708313-30708692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 5
               

               Conread position:
               5-224
               

               Cow position:
               chr11:67207557-67207762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               194, 59
               

               Conread position:
               5-278
               

               Cow position:
               chr11:36848738-36849004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               31, 140
               

               Conread position:
               5-278
               

               Cow position:
               chr11:40792887-40792617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               102, 19
               

               Conread position:
               5-328
               

               Cow position:
               chr11:71868797-71868455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               240
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               31, 144
               

               Conread position:
               5-357
               

               Cow position:
               chr11:81406351-81405990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               249
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               15, 143
               

               Conread position:
               5-363
               

               Cow position:
               chr11:17889915-17889544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               270
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               27, 116
               

               Conread position:
               5-363
               

               Cow position:
               chr11:26067373-26067006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               261
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               15, 58
               

               Conread position:
               6-363
               

               Cow position:
               chr11:45282739-45283110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               8, 113
               

               Conread position:
               7-296
               

               Cow position:
               chr11:38577955-38577671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               36, 26
               

               Conread position:
               8-370
               

               Cow position:
               chr11:64029443-64029077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               265
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               28, 84
               

               Conread position:
               9-228
               

               Cow position:
               chr11:10076583-10076805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               26, 50
               

               Conread position:
               9-278
               

               Cow position:
               chr11:33310785-33311065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               27, 115
               

               Conread position:
               9-351
               

               Cow position:
               chr11:73354239-73353896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               27, 139
               

               Conread position:
               9-366
               

               Cow position:
               chr11:27248308-27248674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               21, 49
               

               Conread position:
               9-367
               

               Cow position:
               chr11:5075408-5075042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               253
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               16, 98
               

               Conread position:
               9-370
               

               Cow position:
               chr11:15467288-15467637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               244
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               219, 46
               

               Conread position:
               9-370
               

               Cow position:
               chr11:47193338-47193685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               21, 63
               

               Conread position:
               10-296
               

               Cow position:
               chr11:17831402-17831115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               23, 70
               

               Conread position:
               10-329
               

               Cow position:
               chr11:68207022-68206697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               24, 47
               

               Conread position:
               10-331
               

               Cow position:
               chr11:3393392-3393063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               26, 59
               

               Conread position:
               10-343
               

               Cow position:
               chr11:81162613-81162284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               225
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               32, 57
               

               Conread position:
               10-359
               

               Cow position:
               chr11:52297404-52297044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               243
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               26, 48
               

               Conread position:
               10-359
               

               Cow position:
               chr11:71493041-71492685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               26, 116
               

               Conread position:
               10-361
               

               Cow position:
               chr11:62239563-62239922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               239
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               26, 48
               

               Conread position:
               10-363
               

               Cow position:
               chr11:9270905-9270555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 17
               

               Conread position:
               10-363
               

               Cow position:
               chr11:79960972-79960620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               242
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               30, 131
               

               Conread position:
               10-367
               

               Cow position:
               chr11:17508737-17508364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               14, 26
               

               Conread position:
               10-368
               

               Cow position:
               chr11:42292016-42291652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               248
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               28, 111
               

               Conread position:
               10-370
               

               Cow position:
               chr11:5418446-5418069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               255
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               33, 88
               

               Conread position:
               10-370
               

               Cow position:
               chr11:35347938-35347560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               265
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               23, 117
               

               Conread position:
               10-370
               

               Cow position:
               chr11:53773492-53773874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 68
               

               Conread position:
               10-371
               

               Cow position:
               chr11:64077683-64077310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               261
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               28, 21
               

               Conread position:
               10-372
               

               Cow position:
               chr11:37974741-37975112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               253
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               29, 116
               

               Conread position:
               10-372
               

               Cow position:
               chr11:63065479-63065844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               258
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               37, 17
               

               Conread position:
               10-372
               

               Cow position:
               chr11:74316530-74316896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               251
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               22, 59
               

               Conread position:
               11-367
               

               Cow position:
               chr11:52381054-52380685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               24, 45
               

               Conread position:
               11-370
               

               Cow position:
               chr11:59463819-59463450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               261
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               26, 47
               

               Conread position:
               12-351
               

               Cow position:
               chr11:71008955-71009278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               24, 9
               

               Conread position:
               13-269
               

               Cow position:
               chr11:48383349-48383600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               32, 122
               

               Conread position:
               13-332
               

               Cow position:
               chr11:49934915-49934591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               11, 51
               

               Conread position:
               14-363
               

               Cow position:
               chr11:31506674-31507011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               96, 17
               

               Conread position:
               15-272
               

               Cow position:
               chr11:16907220-16906968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               21, 7
               

               Conread position:
               18-139
               

               Cow position:
               chr11:29786776-29786656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               26, 16
               

               Conread position:
               18-189
               

               Cow position:
               chr11:36301253-36301082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               17, 128
               

               Conread position:
               18-205
               

               Cow position:
               chr11:36672223-36672031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               18, 123
               

               Conread position:
               18-228
               

               Cow position:
               chr11:21428161-21427956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               175, 13
               

               Conread position:
               18-262
               

               Cow position:
               chr11:49231701-49231946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               14, 43
               

               Conread position:
               18-272
               

               Cow position:
               chr11:83687603-83687351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               30, 78
               

               Conread position:
               18-278
               

               Cow position:
               chr11:377821-377554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               18, 145
               

               Conread position:
               18-278
               

               Cow position:
               chr11:1157469-1157731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               18, 43
               

               Conread position:
               18-278
               

               Cow position:
               chr11:27932093-27932369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               19, 69
               

               Conread position:
               18-278
               

               Cow position:
               chr11:70086149-70086420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               18, 265
               

               Conread position:
               18-281
               

               Cow position:
               chr11:23586462-23586731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               18, 40
               

               Conread position:
               18-286
               

               Cow position:
               chr11:55333736-55334006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               18, 40
               

               Conread position:
               18-295
               

               Cow position:
               chr11:5031950-5031670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               18, 50
               

               Conread position:
               18-297
               

               Cow position:
               chr11:23232686-23232411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               30, 12
               

               Conread position:
               18-297
               

               Cow position:
               chr11:45898228-45897940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               18, 42
               

               Conread position:
               18-341
               

               Cow position:
               chr11:38670507-38670851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               242
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               19, 43
               

               Conread position:
               18-351
               

               Cow position:
               chr11:28993904-28993577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 37
               

               Conread position:
               18-352
               

               Cow position:
               chr11:13043319-13042976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 75
               

               Conread position:
               18-358
               

               Cow position:
               chr11:8988403-8988052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               18, 40
               

               Conread position:
               18-358
               

               Cow position:
               chr11:45631937-45631602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               18, 39
               

               Conread position:
               18-359
               

               Cow position:
               chr11:11125487-11125844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               253
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               18, 40
               

               Conread position:
               18-359
               

               Cow position:
               chr11:30639121-30638773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               250
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               19, 95
               

               Conread position:
               18-363
               

               Cow position:
               chr11:5961138-5961490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               13, 64
               

               Conread position:
               18-363
               

               Cow position:
               chr11:10095171-10095526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               257
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               18, 66
               

               Conread position:
               18-363
               

               Cow position:
               chr11:13499837-13500193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 116
               

               Conread position:
               18-363
               

               Cow position:
               chr11:38638948-38639282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               26, 48
               

               Conread position:
               18-363
               

               Cow position:
               chr11:65495509-65495161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               247
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               18, 137
               

               Conread position:
               18-363
               

               Cow position:
               chr11:68905244-68904905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               181, 38
               

               Conread position:
               18-365
               

               Cow position:
               chr11:23272177-23271821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               250
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               13, 81
               

               Conread position:
               18-365
               

               Cow position:
               chr11:38236071-38236430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 12
               

               Conread position:
               18-365
               

               Cow position:
               chr11:46748039-46747674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 40
               

               Conread position:
               18-365
               

               Cow position:
               chr11:64104232-64103866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               18, 40
               

               Conread position:
               18-366
               

               Cow position:
               chr11:866127-866466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               18, 82
               

               Conread position:
               18-367
               

               Cow position:
               chr11:70600996-70600639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               18, 123
               

               Conread position:
               18-368
               

               Cow position:
               chr11:70484034-70483663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               18-369
               

               Cow position:
               chr11:32055360-32054995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               249
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               22, 123
               

               Conread position:
               18-370
               

               Cow position:
               chr11:21728444-21728099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               233
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               18, 52
               

               Conread position:
               18-370
               

               Cow position:
               chr11:30830791-30830433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               14, 40
               

               Conread position:
               18-372
               

               Cow position:
               chr11:26535603-26535976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               15, 50
               

               Conread position:
               18-372
               

               Cow position:
               chr11:36286526-36286895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               268
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               30, 14
               

               Conread position:
               18-372
               

               Cow position:
               chr11:44031827-44032198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               36, 27
               

               Conread position:
               18-372
               

               Cow position:
               chr11:47899104-47899442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               18, 40
               

               Conread position:
               18-372
               

               Cow position:
               chr11:53778440-53778812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 42
               

               Conread position:
               19-368
               

               Cow position:
               chr11:18509193-18508840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               261
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               17, 124
               

               Conread position:
               19-372
               

               Cow position:
               chr11:34962886-34963243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               15, 42
               

               Conread position:
               20-296
               

               Cow position:
               chr11:63847679-63847958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               172, 35
               

               Conread position:
               20-320
               

               Cow position:
               chr11:59872760-59873063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               16, 36
               

               Conread position:
               20-363
               

               Cow position:
               chr11:67600609-67600961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 134
               

               Conread position:
               20-365
               

               Cow position:
               chr11:67345813-67345474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               255
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               254, 14
               

               Conread position:
               20-367
               

               Cow position:
               chr11:70950709-70951055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               16, 70
               

               Conread position:
               20-372
               

               Cow position:
               chr11:8828801-8828460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               10, 40
               

               Conread position:
               21-266
               

               Cow position:
               chr11:41176122-41175871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               15, 36
               

               Conread position:
               21-358
               

               Cow position:
               chr11:65607863-65607513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               251
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               15, 49
               

               Conread position:
               22-359
               

               Cow position:
               chr11:30209992-30209644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               14, 33
               

               Conread position:
               25-365
               

               Cow position:
               chr11:55494514-55494849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               20, 42
               

               Conread position:
               26-349
               

               Cow position:
               chr11:63435352-63435691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 42
               

               Conread position:
               26-367
               

               Cow position:
               chr11:15772882-15772526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 121
               

               Conread position:
               26-371
               

               Cow position:
               chr11:8545175-8544826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               162, 30
               

               Conread position:
               26-371
               

               Cow position:
               chr11:17860317-17859963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               251
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               166, 30
               

               Conread position:
               27-368
               

               Cow position:
               chr11:7873986-7874330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               166, 29
               

               Conread position:
               34-272
               

               Cow position:
               chr11:6202290-6202526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               34-296
               

               Cow position:
               chr11:40479011-40478747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               11, 111
               

               Conread position:
               34-359
               

               Cow position:
               chr11:51729132-51729453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               237
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               30, 21
               

               Conread position:
               34-362
               

               Cow position:
               chr11:259329-258991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               30, 21
               

               Conread position:
               34-362
               

               Cow position:
               chr11:58588191-58588510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               12, 33
               

               Conread position:
               34-367
               

               Cow position:
               chr11:45619193-45619538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               244
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               16, 62
               

               Conread position:
               34-367
               

               Cow position:
               chr11:66041115-66041460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               242
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               33, 87
               

               Conread position:
               34-367
               

               Cow position:
               chr11:75874908-75874585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               159, 75
               

               Conread position:
               34-367
               

               Cow position:
               chr11:80756940-80756602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               29, 114
               

               Conread position:
               34-370
               

               Cow position:
               chr11:18698721-18699061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 33
               

               Conread position:
               34-370
               

               Cow position:
               chr11:48295876-48296215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               30, 21
               

               Conread position:
               34-370
               

               Cow position:
               chr11:71390720-71390384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               14, 29
               

               Conread position:
               34-372
               

               Cow position:
               chr11:84385794-84385447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               247
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               14, 110
               

               Conread position:
               35-349
               

               Cow position:
               chr11:85703551-85703858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               7, 22
               

               Conread position:
               35-351
               

               Cow position:
               chr11:31337225-31337550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               220
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               28, 87
               

               Conread position:
               36-277
               

               Cow position:
               chr11:70278263-70278026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               28, 106
               

               Conread position:
               41-201
               

               Cow position:
               chr11:65435706-65435864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               152, 15
               

               Conread position:
               41-351
               

               Cow position:
               chr11:56675767-56676096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               31, 82
               

               Conread position:
               41-359
               

               Cow position:
               chr11:25620544-25620211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               135, 15
               

               Conread position:
               41-359
               

               Cow position:
               chr11:68112410-68112080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               236
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               144, 15
               

               Conread position:
               41-363
               

               Cow position:
               chr11:6245174-6245504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               187, 15
               

               Conread position:
               41-363
               

               Cow position:
               chr11:71806291-71805983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               41-363
               

               Cow position:
               chr11:77546270-77546579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               32, 13
               

               Conread position:
               41-365
               

               Cow position:
               chr11:5485862-5486201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               150, 15
               

               Conread position:
               41-365
               

               Cow position:
               chr11:32126463-32126801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               136, 15
               

               Conread position:
               41-367
               

               Cow position:
               chr11:30165362-30165699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               246
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               68, 79
               

               Conread position:
               41-370
               

               Cow position:
               chr11:32254366-32254026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 40
               

               Conread position:
               41-370
               

               Cow position:
               chr11:41134213-41133889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               152, 15
               

               Conread position:
               41-371
               

               Cow position:
               chr11:68770213-68770555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               31, 15
               

               Conread position:
               42-335
               

               Cow position:
               chr11:87155371-87155676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               97, 90
               

               Conread position:
               42-362
               

               Cow position:
               chr11:42836107-42835771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               235
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               33, 14
               

               Conread position:
               42-363
               

               Cow position:
               chr11:49057256-49057566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               231
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               186, 9
               

               Conread position:
               43-365
               

               Cow position:
               chr11:84228859-84228538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               146, 55
               

               Conread position:
               48-248
               

               Cow position:
               chr11:42003086-42002889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               147, 84
               

               Conread position:
               48-363
               

               Cow position:
               chr11:39462487-39462802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               232
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               145, 35
               

               Conread position:
               48-363
               

               Cow position:
               chr11:67615071-67614742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               218
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               48-367
               

               Cow position:
               chr11:38334384-38334709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               238
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               145, 61
               

               Conread position:
               48-372
               

               Cow position:
               chr11:23251734-23251407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               49-359
               

               Cow position:
               chr11:21422076-21421759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               147, 95
               

               Conread position:
               49-365
               

               Cow position:
               chr11:48659789-48660115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               229
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               12, 117
               

               Conread position:
               49-371
               

               Cow position:
               chr11:53816719-53817046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               238
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               179, 31
               

               Conread position:
               50-363
               

               Cow position:
               chr11:83397765-83398090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               231
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               111, 91
               

               Conread position:
               50-371
               

               Cow position:
               chr11:27907653-27907962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               178, 82
               

               Conread position:
               51-363
               

               Cow position:
               chr11:70756341-70756657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               7, 68
               

               Conread position:
               53-371
               

               Cow position:
               chr11:51196215-51195906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 46
               

               Conread position:
               54-365
               

               Cow position:
               chr11:53510632-53510310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               239
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               67, 13
               

               Conread position:
               55-372
               

               Cow position:
               chr11:21398827-21399131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               11, 54
               

               Conread position:
               56-368
               

               Cow position:
               chr11:43360917-43360599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               230
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               113, 139
               

               Conread position:
               56-372
               

               Cow position:
               chr11:70206188-70206507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               8, 32
               

               Conread position:
               57-351
               

               Cow position:
               chr11:53462809-53463113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               213
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               10, 66
               

               Conread position:
               57-364
               

               Cow position:
               chr11:57873696-57873992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               57-367
               

               Cow position:
               chr11:40395304-40395623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               10, 63
               

               Conread position:
               58-361
               

               Cow position:
               chr11:62742766-62742467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               6, 30
               

               Conread position:
               58-371
               

               Cow position:
               chr11:5433132-5433458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               78, 51
               

               Conread position:
               59-363
               

               Cow position:
               chr11:7385299-7385617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               220
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               49, 8
               

               Conread position:
               63-363
               

               Cow position:
               chr11:52690649-52690342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               223
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               130, 83
               

               Conread position:
               63-367
               

               Cow position:
               chr11:33825018-33824727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               63-367
               

               Cow position:
               chr11:49873015-49872700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               215
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               13, 70
               

               Conread position:
               66-363
               

               Cow position:
               chr11:13940067-13940370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               31, 67
               

               Conread position:
               66-363
               

               Cow position:
               chr11:27719447-27719156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               49, 71
               

               Conread position:
               66-369
               

               Cow position:
               chr11:62789004-62789316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               140, 66
               

               Conread position:
               67-278
               

               Cow position:
               chr11:33345320-33345533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               126, 74
               

               Conread position:
               67-363
               

               Cow position:
               chr11:64104870-64105176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               41, 111
               

               Conread position:
               68-278
               

               Cow position:
               chr11:3739831-3740041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               127, 22
               

               Conread position:
               68-369
               

               Cow position:
               chr11:81168154-81167841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               68-372
               

               Cow position:
               chr11:42066738-42067056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               120, 41
               

               Conread position:
               69-363
               

               Cow position:
               chr11:7378471-7378765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               34, 65
               

               Conread position:
               71-359
               

               Cow position:
               chr11:63920168-63919888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               122, 47
               

               Conread position:
               71-370
               

               Cow position:
               chr11:47311104-47310793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               41, 51
               

               Conread position:
               71-371
               

               Cow position:
               chr11:5217585-5217269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               221
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               38, 16
               

               Conread position:
               75-363
               

               Cow position:
               chr11:37919159-37918865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               119, 26
               

               Conread position:
               75-371
               

               Cow position:
               chr11:39060716-39060414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               38, 58
               

               Conread position:
               76-365
               

               Cow position:
               chr11:6423517-6423213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               88, 42
               

               Conread position:
               77-367
               

               Cow position:
               chr11:72870786-72871085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               16, 112
               

               Conread position:
               80-359
               

               Cow position:
               chr11:30808712-30808418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               63, 269
               

               Conread position:
               80-372
               

               Cow position:
               chr11:29659452-29659751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               213
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               119, 50
               

               Conread position:
               81-359
               

               Cow position:
               chr11:6194298-6194567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               147, 61
               

               Conread position:
               84-371
               

               Cow position:
               chr11:8584214-8584504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               58, 85
               

               Conread position:
               87-367
               

               Cow position:
               chr11:16314769-16315062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               26, 35
               

               Conread position:
               88-278
               

               Cow position:
               chr11:35573591-35573404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               111, 56
               

               Conread position:
               88-359
               

               Cow position:
               chr11:80413114-80412830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               102, 30
               

               Conread position:
               90-349
               

               Cow position:
               chr11:35927007-35926740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               137, 52
               

               Conread position:
               94-371
               

               Cow position:
               chr11:67912249-67911976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               77, 48
               

               Conread position:
               99-356
               

               Cow position:
               chr11:18543600-18543345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               127, 107
               

               Conread position:
               100-265
               

               Cow position:
               chr11:55203550-55203384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               92, 30
               

               Conread position:
               100-340
               

               Cow position:
               chr11:30370017-30370262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               12, 20
               

               Conread position:
               100-363
               

               Cow position:
               chr11:19946345-19946604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               97, 19
               

               Conread position:
               106-350
               

               Cow position:
               chr11:27565252-27565486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               99, 13
               

               Conread position:
               106-355
               

               Cow position:
               chr11:36920664-36920403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               87, 45
               

               Conread position:
               109-359
               

               Cow position:
               chr11:4199192-4199453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               87, 12
               

               Conread position:
               109-362
               

               Cow position:
               chr11:41603770-41603519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               39, 10
               

               Conread position:
               109-363
               

               Cow position:
               chr11:84890801-84890544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               42, 10
               

               Conread position:
               110-359
               

               Cow position:
               chr11:41313737-41313483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               88, 33
               

               Conread position:
               116-363
               

               Cow position:
               chr11:34010281-34010533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               69, 27
               

               Conread position:
               119-365
               

               Cow position:
               chr11:57503410-57503665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               74, 14
               

               Conread position:
               120-367
               

               Cow position:
               chr11:62482566-62482830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               120-372
               

               Cow position:
               chr11:57608527-57608274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               108, 21
               

               Conread position:
               121-371
               

               Cow position:
               chr11:19259584-19259340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               78, 45
               

               Conread position:
               136-359
               

               Cow position:
               chr11:35723913-35724149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               52, 56
               

               Conread position:
               139-363
               

               Cow position:
               chr11:35352096-35351850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               17, 59
               

               Conread position:
               142-363
               

               Cow position:
               chr11:53888688-53888466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               21, 65
               

               Conread position:
               142-367
               

               Cow position:
               chr11:41212989-41213240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               143-354
               

               Cow position:
               chr11:35109587-35109366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               56, 21
               

               Conread position:
               144-367
               

               Cow position:
               chr11:78820101-78820338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               27, 77
               

               Conread position:
               144-371
               

               Cow position:
               chr11:61675419-61675656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               145-363
               

               Cow position:
               chr11:29677154-29677390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               145-365
               

               Cow position:
               chr11:32777631-32777858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               83, 61
               

               Conread position:
               145-369
               

               Cow position:
               chr11:56311644-56311410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               145-372
               

               Cow position:
               chr11:73573597-73573839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               146-363
               

               Cow position:
               chr11:16320239-16320449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               11, 19
               

               Conread position:
               146-363
               

               Cow position:
               chr11:46922933-46922704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               146-365
               

               Cow position:
               chr11:80639597-80639367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               60, 131
               

               Conread position:
               146-369
               

               Cow position:
               chr11:48085871-48086107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               16, 20
               

               Conread position:
               146-371
               

               Cow position:
               chr11:18924698-18924938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               146-372
               

               Cow position:
               chr11:19500836-19500612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               82, 48
               

               Conread position:
               147-365
               

               Cow position:
               chr11:30172263-30172485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               81, 59
               

               Conread position:
               147-365
               

               Cow position:
               chr11:48512118-48512328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               52, 131
               

               Conread position:
               147-368
               

               Cow position:
               chr11:35669998-35669778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               52, 104
               

               Conread position:
               147-372
               

               Cow position:
               chr11:25119977-25119744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               59, 40
               

               Conread position:
               148-359
               

               Cow position:
               chr11:27462143-27461932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               51, 68
               

               Conread position:
               148-363
               

               Cow position:
               chr11:5219204-5218980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               33, 10
               

               Conread position:
               148-363
               

               Cow position:
               chr11:83032635-83032860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               11, 17
               

               Conread position:
               148-370
               

               Cow position:
               chr11:77013739-77013960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               80, 59
               

               Conread position:
               148-371
               

               Cow position:
               chr11:22676070-22676303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               45, 79
               

               Conread position:
               148-371
               

               Cow position:
               chr11:37989665-37989431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               34, 46
               

               Conread position:
               148-372
               

               Cow position:
               chr11:18447537-18447310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               58, 142
               

               Conread position:
               148-372
               

               Cow position:
               chr11:39249927-39250157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               45, 110
               

               Conread position:
               149-360
               

               Cow position:
               chr11:62889938-62889712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               149-363
               

               Cow position:
               chr11:41295250-41295040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               41, 61
               

               Conread position:
               150-364
               

               Cow position:
               chr11:43914250-43914477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               49, 13
               

               Conread position:
               150-367
               

               Cow position:
               chr11:28078460-28078677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               7, 15
               

               Conread position:
               152-369
               

               Cow position:
               chr11:10956914-10956684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               19, 12
               

               Conread position:
               153-363
               

               Cow position:
               chr11:36520834-36521063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               164-363
               

               Cow position:
               chr11:31537469-31537265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               164-367
               

               Cow position:
               chr11:63382220-63382010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               164-368
               

               Cow position:
               chr11:66939622-66939403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               164-370
               

               Cow position:
               chr11:64408947-64409157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               107, 42
               

               Conread position:
               164-372
               

               Cow position:
               chr11:69417374-69417596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               167-367
               

               Cow position:
               chr11:45671392-45671193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               7, 17
               

               Conread position:
               169-367
               

               Cow position:
               chr11:17559106-17559301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               24, 105
               

               Conread position:
               169-372
               

               Cow position:
               chr11:20205876-20205667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               37, 203
               

               Conread position:
               171-362
               

               Cow position:
               chr11:3797695-3797886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               34, 107
               

               Conread position:
               171-371
               

               Cow position:
               chr11:25783690-25783902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               28, 201
               

               Conread position:
               173-368
               

               Cow position:
               chr11:46784454-46784651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               24, 49
               

               Conread position:
               175-363
               

               Cow position:
               chr11:17517380-17517582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               18, 172
               

               Conread position:
               176-366
               

               Cow position:
               chr11:12555323-12555118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               177-359
               

               Cow position:
               chr11:43627333-43627138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               11, 17
               

               Conread position:
               177-360
               

               Cow position:
               chr11:9699261-9699075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               22, 125
               

               Conread position:
               177-362
               

               Cow position:
               chr11:21830226-21830029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               16, 130
               

               Conread position:
               177-362
               

               Cow position:
               chr11:42084692-42084491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               177-363
               

               Cow position:
               chr11:10562992-10563188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               177-371
               

               Cow position:
               chr11:18119485-18119693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               21, 165
               

               Conread position:
               178-365
               

               Cow position:
               chr11:87172092-87171891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               15, 135
               

               Conread position:
               178-370
               

               Cow position:
               chr11:15366988-15366785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               178-371
               

               Cow position:
               chr11:37100184-37099981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               50, 28
               

               Conread position:
               179-362
               

               Cow position:
               chr11:21124621-21124427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               48, 27
               

               Conread position:
               179-363
               

               Cow position:
               chr11:25750869-25751051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               9, 39
               

               Conread position:
               179-363
               

               Cow position:
               chr11:77017227-77017413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               20, 92
               

               Conread position:
               179-367
               

               Cow position:
               chr11:77241692-77241889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               16, 32
               

               Conread position:
               179-370
               

               Cow position:
               chr11:86895362-86895563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               180-351
               

               Cow position:
               chr11:5642072-5641901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               53, 12
               

               Conread position:
               180-371
               

               Cow position:
               chr11:5328775-5328977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               180-371
               

               Cow position:
               chr11:37336102-37335913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               29, 98
               

               Conread position:
               180-372
               

               Cow position:
               chr11:19657224-19657022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               52, 13
               

               Conread position:
               180-372
               

               Cow position:
               chr11:52179351-52179544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               181-363
               

               Cow position:
               chr11:10066338-10066532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               13, 9
               

               Conread position:
               181-367
               

               Cow position:
               chr11:1980280-1980077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               183-349
               

               Cow position:
               chr11:62566833-62566997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               45, 7
               

               Conread position:
               183-359
               

               Cow position:
               chr11:17074229-17074049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               45, 23
               

               Conread position:
               183-367
               

               Cow position:
               chr11:19549474-19549664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               45, 23
               

               Conread position:
               185-372
               

               Cow position:
               chr11:63407691-63407886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               90, 21
               

               Conread position:
               186-351
               

               Cow position:
               chr11:64023104-64022939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               90, 8
               

               Conread position:
               187-360
               

               Cow position:
               chr11:1485230-1485054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               41, 9
               

               Conread position:
               187-369
               

               Cow position:
               chr11:33368079-33368261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               39, 7
               

               Conread position:
               188-363
               

               Cow position:
               chr11:36300580-36300401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               83, 6
               

               Conread position:
               190-363
               

               Cow position:
               chr11:41278183-41278370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               193-360
               

               Cow position:
               chr11:42065651-42065832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               193-363
               

               Cow position:
               chr11:5231645-5231464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               193-363
               

               Cow position:
               chr11:6006314-6006492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               35, 21
               

               Conread position:
               193-370
               

               Cow position:
               chr11:6352810-6352999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               35, 62
               

               Conread position:
               193-370
               

               Cow position:
               chr11:42064223-42064034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               35, 66
               

               Conread position:
               193-370
               

               Cow position:
               chr11:81066048-81065860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               194-360
               

               Cow position:
               chr11:23220365-23220540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               31, 131
               

               Conread position:
               194-361
               

               Cow position:
               chr11:57767193-57767370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               13, 20
               

               Conread position:
               194-363
               

               Cow position:
               chr11:9279435-9279615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               34, 50
               

               Conread position:
               194-363
               

               Cow position:
               chr11:58185885-58186055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               34, 83
               

               Conread position:
               194-363
               

               Cow position:
               chr11:80586277-80586448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               39, 163
               

               Conread position:
               194-366
               

               Cow position:
               chr11:40538553-40538735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               34, 77
               

               Conread position:
               194-367
               

               Cow position:
               chr11:7571627-7571808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               194-371
               

               Cow position:
               chr11:30322490-30322303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               34, 130
               

               Conread position:
               194-372
               

               Cow position:
               chr11:80370117-80370306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               34, 20
               

               Conread position:
               195-359
               

               Cow position:
               chr11:63484941-63485111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               195-369
               

               Cow position:
               chr11:77227542-77227720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               33, 107
               

               Conread position:
               195-371
               

               Cow position:
               chr11:30986643-30986827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               33, 11
               

               Conread position:
               196-367
               

               Cow position:
               chr11:77554645-77554471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               32, 82
               

               Conread position:
               197-371
               

               Cow position:
               chr11:5176371-5176192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               31, 175
               

               Conread position:
               198-363
               

               Cow position:
               chr11:19148130-19147959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               28, 62
               

               Conread position:
               198-372
               

               Cow position:
               chr11:31991649-31991480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               30, 80
               

               Conread position:
               200-370
               

               Cow position:
               chr11:31866590-31866770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               202-367
               

               Cow position:
               chr11:82733139-82732968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               19, 157
               

               Conread position:
               207-367
               

               Cow position:
               chr11:68570365-68570194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               21, 122
               

               Conread position:
               210-363
               

               Cow position:
               chr11:4389922-4390086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               210-371
               

               Cow position:
               chr11:56114959-56115128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               214-360
               

               Cow position:
               chr11:33369173-33369332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               214-363
               

               Cow position:
               chr11:37564896-37565052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               214-363
               

               Cow position:
               chr11:38223765-38223610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               14, 44
               

               Conread position:
               214-367
               

               Cow position:
               chr11:25968831-25968665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               214-369
               

               Cow position:
               chr11:50629299-50629460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               14, 124
               

               Conread position:
               217-363
               

               Cow position:
               chr11:62102422-62102263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               218-371
               

               Cow position:
               chr11:8422091-8421934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               220-363
               

               Cow position:
               chr11:51683244-51683399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               220-372
               

               Cow position:
               chr11:20823837-20823684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               8, 40
               

               Conread position:
               222-363
               

               Cow position:
               chr11:59744038-59744179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               35, 49
               

               Conread position:
               223-371
               

               Cow position:
               chr11:62483928-62483783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               227-363
               

               Cow position:
               chr11:2937624-2937489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               53, 7
               

               Conread position:
               227-372
               

               Cow position:
               chr11:37982504-37982354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               229-357
               

               Cow position:
               chr11:86925921-86925787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               45, 125
               

               Conread position:
               229-363
               

               Cow position:
               chr11:21322455-21322322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               229-365
               

               Cow position:
               chr11:33271470-33271614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               229-365
               

               Cow position:
               chr11:38657144-38656997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               229-367
               

               Cow position:
               chr11:17369570-17369713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               59, 46
               

               Conread position:
               229-371
               

               Cow position:
               chr11:3267616-3267477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               230-363
               

               Cow position:
               chr11:57170558-57170427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               240-372
               

               Cow position:
               chr11:46978345-46978211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               250-372
               

               Cow position:
               chr11:26057576-26057454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               112, 13
               

               Conread position:
               261-369
               

               Cow position:
               chr11:55334001-55334108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               269-363
               

               Cow position:
               chr11:63695750-63695655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               82
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               269-365
               

               Cow position:
               chr11:24551480-24551576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               269-367
               

               Cow position:
               chr11:22102669-22102569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               84
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               269-367
               

               Cow position:
               chr11:63849861-63849762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               269-367
               

               Cow position:
               chr11:68592108-68592207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               84
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               269-367
               

               Cow position:
               chr11:68909445-68909346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               90, 85
               

               Conread position:
               269-369
               

               Cow position:
               chr11:28092540-28092641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               270-359
               

               Cow position:
               chr11:8828100-8828189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               90
               

               Alignm identity:
               77
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               270-365
               

               Cow position:
               chr11:26823202-26823297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               83
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               270-367
               

               Cow position:
               chr11:44176687-44176779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               270-367
               

               Cow position:
               chr11:83042150-83042052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               270-368
               

               Cow position:
               chr11:35544176-35544275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               83
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               270-370
               

               Cow position:
               chr11:15744995-15744894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               270-370
               

               Cow position:
               chr11:21590478-21590579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               270-370
               

               Cow position:
               chr11:62708281-62708381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               270-371
               

               Cow position:
               chr11:4422269-4422371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               84
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               270-371
               

               Cow position:
               chr11:36136198-36136300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               270-371
               

               Cow position:
               chr11:80695151-80695050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               83
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               270-372
               

               Cow position:
               chr11:27260813-27260711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               84
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               270-372
               

               Cow position:
               chr11:49192365-49192262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               270-372
               

               Cow position:
               chr11:53460788-53460890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               270-372
               

               Cow position:
               chr11:72568376-72568274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               271-365
               

               Cow position:
               chr11:50914833-50914927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               82
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               89, 60
               

               Conread position:
               271-369
               

               Cow position:
               chr11:71481933-71481835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               81
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               271-372
               

               Cow position:
               chr11:56901973-56901872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               272-370
               

               Cow position:
               chr11:35801609-35801707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               81
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               280-372
               

               Cow position:
               chr11:10294490-10294581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               93
               

               Alignm identity:
               82
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               281-369
               

               Cow position:
               chr11:30978279-30978190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               90
               

               Alignm identity:
               78
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               290-365
               

               Cow position:
               chr11:36180553-36180628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               76
               

               Alignm identity:
               72
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               292-371
               

               Cow position:
               chr11:72406035-72405955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               81
               

               Alignm identity:
               73
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               69, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-173
Cow position:	chr11:43914024-43914195 (view UCSC Genome Browser custom track)
Alignm length:	174
Alignm identity:	131
Alignm E-value:	7e-30
Alignm gaps (pig, cow):	156, 131
Conread position:	1-181
Cow position:	chr11:77241176-77241358 (view UCSC Genome Browser custom track)
Alignm length:	187
Alignm identity:	137
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	21, 61
Conread position:	1-188
Cow position:	chr11:81614830-81614645 (view UCSC Genome Browser custom track)
Alignm length:	193
Alignm identity:	144
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	34, 8
Conread position:	1-189
Cow position:	chr11:62808846-62808656 (view UCSC Genome Browser custom track)
Alignm length:	197
Alignm identity:	141
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	19, 148
Conread position:	1-203
Cow position:	chr11:9837294-9837089 (view UCSC Genome Browser custom track)
Alignm length:	209
Alignm identity:	153
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	32, 150
Conread position:	1-220
Cow position:	chr11:81174692-81174913 (view UCSC Genome Browser custom track)
Alignm length:	230
Alignm identity:	165
Alignm E-value:	5e-27
Alignm gaps (pig, cow):	19, 65
Conread position:	1-226
Cow position:	chr11:27386537-27386304 (view UCSC Genome Browser custom track)
Alignm length:	234
Alignm identity:	159
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	25, 0
Conread position:	1-271
Cow position:	chr11:52983493-52983757 (view UCSC Genome Browser custom track)
Alignm length:	277
Alignm identity:	198
Alignm E-value:	4e-34
Alignm gaps (pig, cow):	58, 35
Conread position:	1-273
Cow position:	chr11:44642483-44642208 (view UCSC Genome Browser custom track)
Alignm length:	285
Alignm identity:	192
Alignm E-value:	9e-22
Alignm gaps (pig, cow):	13, 63
Conread position:	1-274
Cow position:	chr11:26483521-26483791 (view UCSC Genome Browser custom track)
Alignm length:	279
Alignm identity:	199
Alignm E-value:	2e-38
Alignm gaps (pig, cow):	35, 144
Conread position:	1-278
Cow position:	chr11:34032395-34032111 (view UCSC Genome Browser custom track)
Alignm length:	291
Alignm identity:	212
Alignm E-value:	6e-39
Alignm gaps (pig, cow):	34, 68
Conread position:	1-311
Cow position:	chr11:38874600-38874285 (view UCSC Genome Browser custom track)
Alignm length:	324
Alignm identity:	235
Alignm E-value:	4.06377e-44
Alignm gaps (pig, cow):	19, 64
Conread position:	1-350
Cow position:	chr11:34113074-34113431 (view UCSC Genome Browser custom track)
Alignm length:	365
Alignm identity:	239
Alignm E-value:	5e-27
Alignm gaps (pig, cow):	35, 11
Conread position:	1-351
Cow position:	chr11:60302155-60301806 (view UCSC Genome Browser custom track)
Alignm length:	367
Alignm identity:	261
Alignm E-value:	2e-40
Alignm gaps (pig, cow):	19, 63
Conread position:	1-352
Cow position:	chr11:22978057-22977710 (view UCSC Genome Browser custom track)
Alignm length:	368
Alignm identity:	248
Alignm E-value:	5e-27
Alignm gaps (pig, cow):	36, 69
Conread position:	1-357
Cow position:	chr11:14470178-14470538 (view UCSC Genome Browser custom track)
Alignm length:	369
Alignm identity:	246
Alignm E-value:	1e-32
Alignm gaps (pig, cow):	33, 7
Conread position:	1-359
Cow position:	chr11:18484357-18484022 (view UCSC Genome Browser custom track)
Alignm length:	362
Alignm identity:	257
Alignm E-value:	9.00054e-42
Alignm gaps (pig, cow):	30, 65
Conread position:	1-363
Cow position:	chr11:6234076-6233695 (view UCSC Genome Browser custom track)
Alignm length:	388
Alignm identity:	266
Alignm E-value:	5e-37
Alignm gaps (pig, cow):	18, 64
Conread position:	1-365
Cow position:	chr11:62620187-62620561 (view UCSC Genome Browser custom track)
Alignm length:	386
Alignm identity:	249
Alignm E-value:	8e-21
Alignm gaps (pig, cow):	23, 63
Conread position:	1-368
Cow position:	chr11:68910040-68909664 (view UCSC Genome Browser custom track)
Alignm length:	387
Alignm identity:	282
Alignm E-value:	0
Alignm gaps (pig, cow):	34, 10