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Cow genome map

           
Conread name:
           
Ss1.1-CorL-UMC-pd12cl-021-d03.3
        

               
Conread position:
               
1-139
               

               
Cow position:
               
chr3:2483251-2483389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr3:4087368-4087177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr3:59885182-59885380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr3:3062360-3062563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr3:8147867-8147656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
33, 133
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr3:39328198-39328426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
31, 167
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr3:66610040-66609792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr3:49140238-49139979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
34, 67
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr3:14626354-14626073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
32, 16
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr3:35852670-35852394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
19, 64
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr3:57760296-57760575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
19, 148
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr3:79292632-79292905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
31, 99
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr3:5100963-5100691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
35, 19
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr3:35299472-35299747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
192, 55
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr3:38691608-38691325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
19, 62
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr3:57624265-57624545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
35, 81
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr3:59884270-59883988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
24, 59
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr3:80581469-80581736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
41, 32
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr3:55085386-55085085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
19, 157
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr3:76387794-76387510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
47, 53
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr3:58767077-58767361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
63, 16
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr3:5097002-5097307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 149
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr3:17935125-17934835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
204, 14
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr3:28898425-28898090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
23, 143
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr3:70401700-70402017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
19, 73
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr3:77271469-77271140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
27, 55
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr3:44101772-44102113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
35, 8
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr3:54959988-54960316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
19, 82
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr3:59000948-59000599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr3:34270724-34271065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
40, 8
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr3:38863915-38864284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
19, 59
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr3:51234298-51233938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 148
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr3:55124480-55124119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
19, 78
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr3:8060930-8061291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
35, 10
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr3:26903913-26904270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
19, 113
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr3:73764398-73764044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 64
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr3:75158163-75158526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
35, 16
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr3:10958431-10958071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
139, 16
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr3:71237954-71238322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 61
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr3:65413479-65413092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
23, 58
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr3:2674827-2675207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
19, 62
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr3:14552676-14553047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 70
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr3:18393586-18393225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
35, 69
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr3:20997182-20996827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
64, 19
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr3:29360332-29359989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
223, 23
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr3:31309557-31309179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 136
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr3:45211093-45211479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
19, 103
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr3:48252688-48253054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 57
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr3:51578523-51578149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
27, 62
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr3:52652276-52651905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 60
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr3:55189952-55189575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr3:75479810-75480173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
223, 11
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr3:76713524-76713137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
25, 148
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr3:80740370-80740728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
33, 49
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr3:32584956-32585329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 68
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr3:37041225-37041592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 19
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr3:210121-210502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 57
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr3:30179881-30180263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 124
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr3:55319100-55318718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 14
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr3:67520378-67519997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 175
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr3:53221812-53222194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
13, 61
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr3:33253083-33252709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
19, 128
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr3:53875957-53875580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
35, 96
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr3:13329975-13329609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
29, 56
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr3:19711518-19711153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
192, 19
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr3:54506518-54506891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
63, 16
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr3:56476480-56476858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
19, 59
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr3:60597343-60597721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
19, 94
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr3:82460980-82461298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
14, 148
               

               
Conread position:
               
2-326
               

               
Cow position:
               
chr3:45647938-45648251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
21, 66
               

               
Conread position:
               
2-363
               

               
Cow position:
               
chr3:50614438-50614798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
18, 70
               

               
Conread position:
               
2-363
               

               
Cow position:
               
chr3:59473911-59474295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
18, 114
               

               
Conread position:
               
2-367
               

               
Cow position:
               
chr3:4461690-4461311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
18, 70
               

               
Conread position:
               
3-188
               

               
Cow position:
               
chr3:49731838-49731651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
12, 142
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr3:59514911-59515107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 53
               

               
Conread position:
               
3-234
               

               
Cow position:
               
chr3:35005586-35005812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
33, 5
               

               
Conread position:
               
3-248
               

               
Cow position:
               
chr3:14633179-14632931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
8, 64
               

               
Conread position:
               
3-269
               

               
Cow position:
               
chr3:27697174-27696906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
31, 8
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr3:26960786-26960507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
33, 8
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr3:49650189-49650469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
26, 8
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr3:53112978-53113256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
33, 8
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr3:81471301-81471015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
17, 128
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr3:7678471-7678752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
31, 133
               

               
Conread position:
               
3-349
               

               
Cow position:
               
chr3:56612164-56612523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
35, 8
               

               
Conread position:
               
3-350
               

               
Cow position:
               
chr3:74119637-74119268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 8
               

               
Conread position:
               
3-354
               

               
Cow position:
               
chr3:17222339-17221967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
30, 8
               

               
Conread position:
               
3-356
               

               
Cow position:
               
chr3:80564768-80565130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
33, 8
               

               
Conread position:
               
3-359
               

               
Cow position:
               
chr3:61169605-61169981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
71, 24
               

               
Conread position:
               
3-363
               

               
Cow position:
               
chr3:15229019-15228666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
33, 113
               

               
Conread position:
               
3-363
               

               
Cow position:
               
chr3:17456460-17456092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 8
               

               
Conread position:
               
3-363
               

               
Cow position:
               
chr3:17937030-17936672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
33, 8
               

               
Conread position:
               
3-363
               

               
Cow position:
               
chr3:38828571-38828926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
33, 8
               

               
Conread position:
               
3-363
               

               
Cow position:
               
chr3:39970063-39969688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
33, 8
               

               
Conread position:
               
3-363
               

               
Cow position:
               
chr3:44932317-44932687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
33, 8
               

               
Conread position:
               
3-363
               

               
Cow position:
               
chr3:65968963-65969349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 8
               

               
Conread position:
               
3-364
               

               
Cow position:
               
chr3:48362890-48363245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
31, 8
               

               
Conread position:
               
3-365
               

               
Cow position:
               
chr3:20675071-20674702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
28, 58
               

               
Conread position:
               
3-365
               

               
Cow position:
               
chr3:20802830-20802463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 130
               

               
Conread position:
               
3-367
               

               
Cow position:
               
chr3:29813052-29813405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
31, 8
               

               
Conread position:
               
3-367
               

               
Cow position:
               
chr3:49482909-49482534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
23, 126
               

               
Conread position:
               
3-367
               

               
Cow position:
               
chr3:55712234-55712611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 8
               

               
Conread position:
               
3-367
               

               
Cow position:
               
chr3:68708199-68707843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
33, 8
               

               
Conread position:
               
3-367
               

               
Cow position:
               
chr3:68881307-68880952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
33, 8
               

               
Conread position:
               
3-369
               

               
Cow position:
               
chr3:27274334-27274708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
17, 5
               

               
Conread position:
               
3-370
               

               
Cow position:
               
chr3:2518728-2518358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 8
               

               
Conread position:
               
3-370
               

               
Cow position:
               
chr3:26065810-26066169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
32, 8
               

               
Conread position:
               
3-370
               

               
Cow position:
               
chr3:80973162-80973534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
35, 8
               

               
Conread position:
               
3-371
               

               
Cow position:
               
chr3:17134148-17134514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
77, 8
               

               
Conread position:
               
3-371
               

               
Cow position:
               
chr3:28908395-28908033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
61, 51
               

               
Conread position:
               
3-371
               

               
Cow position:
               
chr3:55970313-55970699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 8
               

               
Conread position:
               
3-372
               

               
Cow position:
               
chr3:74234001-74234365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
33, 8
               

               
Conread position:
               
4-189
               

               
Cow position:
               
chr3:41367178-41366991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 5
               

               
Conread position:
               
4-272
               

               
Cow position:
               
chr3:59621832-59621572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
195, 5
               

               
Conread position:
               
4-296
               

               
Cow position:
               
chr3:4031774-4032062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 54
               

               
Conread position:
               
4-296
               

               
Cow position:
               
chr3:48296515-48296803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 5
               

               
Conread position:
               
4-296
               

               
Cow position:
               
chr3:59630693-59630412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
224, 7
               

               
Conread position:
               
4-325
               

               
Cow position:
               
chr3:68583197-68582871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
32, 5
               

               
Conread position:
               
4-350
               

               
Cow position:
               
chr3:7566613-7566259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 5
               

               
Conread position:
               
4-359
               

               
Cow position:
               
chr3:54434779-54435139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
22, 5
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr3:30463360-30463004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 5
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr3:77365490-77365117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
16, 5
               

               
Conread position:
               
4-365
               

               
Cow position:
               
chr3:18066940-18067309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 67
               

               
Conread position:
               
4-372
               

               
Cow position:
               
chr3:76138285-76138642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
10, 140
               

               
Conread position:
               
5-139
               

               
Cow position:
               
chr3:56704739-56704601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
11, 56
               

               
Conread position:
               
5-367
               

               
Cow position:
               
chr3:60933217-60933597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 106
               

               
Conread position:
               
5-370
               

               
Cow position:
               
chr3:59649060-59649436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
28, 132
               

               
Conread position:
               
6-372
               

               
Cow position:
               
chr3:49678925-49679318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
16, 152
               

               
Conread position:
               
7-278
               

               
Cow position:
               
chr3:67930374-67930106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 51
               

               
Conread position:
               
7-337
               

               
Cow position:
               
chr3:55010357-55010022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
14, 87
               

               
Conread position:
               
8-159
               

               
Cow position:
               
chr3:78739670-78739817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
8-278
               

               
Cow position:
               
chr3:30221998-30222272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
7, 134
               

               
Conread position:
               
8-278
               

               
Cow position:
               
chr3:80053734-80053462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
28, 14
               

               
Conread position:
               
8-347
               

               
Cow position:
               
chr3:4050004-4050340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 138
               

               
Conread position:
               
9-278
               

               
Cow position:
               
chr3:8393749-8394023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
33, 58
               

               
Conread position:
               
9-278
               

               
Cow position:
               
chr3:34669918-34669652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
27, 136
               

               
Conread position:
               
9-360
               

               
Cow position:
               
chr3:68586832-68587191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 49
               

               
Conread position:
               
9-363
               

               
Cow position:
               
chr3:3985140-3985492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 58
               

               
Conread position:
               
9-363
               

               
Cow position:
               
chr3:18459710-18459362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 50
               

               
Conread position:
               
9-363
               

               
Cow position:
               
chr3:75050808-75050448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 22
               

               
Conread position:
               
9-368
               

               
Cow position:
               
chr3:15052144-15051772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
10, 51
               

               
Conread position:
               
9-372
               

               
Cow position:
               
chr3:18686717-18687085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 137
               

               
Conread position:
               
10-203
               

               
Cow position:
               
chr3:49218498-49218311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
10-224
               

               
Cow position:
               
chr3:55106628-55106413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
27, 125
               

               
Conread position:
               
10-272
               

               
Cow position:
               
chr3:43571551-43571824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 81
               

               
Conread position:
               
10-348
               

               
Cow position:
               
chr3:11987141-11987488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
38, 123
               

               
Conread position:
               
10-359
               

               
Cow position:
               
chr3:23471653-23471292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
26, 89
               

               
Conread position:
               
10-359
               

               
Cow position:
               
chr3:53150140-53150504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
26, 45
               

               
Conread position:
               
10-359
               

               
Cow position:
               
chr3:74533163-74533505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
26, 46
               

               
Conread position:
               
10-359
               

               
Cow position:
               
chr3:83215070-83215440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
12, 32
               

               
Conread position:
               
10-360
               

               
Cow position:
               
chr3:48241432-48241778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
10-361
               

               
Cow position:
               
chr3:77188253-77188613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
10-362
               

               
Cow position:
               
chr3:12705729-12705373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
205, 17
               

               
Conread position:
               
10-363
               

               
Cow position:
               
chr3:43233318-43233678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 112
               

               
Conread position:
               
10-364
               

               
Cow position:
               
chr3:54374050-54373681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
27, 127
               

               
Conread position:
               
10-367
               

               
Cow position:
               
chr3:49327758-49328112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
196, 17
               

               
Conread position:
               
10-367
               

               
Cow position:
               
chr3:55819558-55819928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
26, 230
               

               
Conread position:
               
10-367
               

               
Cow position:
               
chr3:72473722-72474102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
28, 51
               

               
Conread position:
               
10-368
               

               
Cow position:
               
chr3:61894357-61894002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
17, 91
               

               
Conread position:
               
10-372
               

               
Cow position:
               
chr3:2506666-2506292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 135
               

               
Conread position:
               
10-372
               

               
Cow position:
               
chr3:39066148-39066511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
28, 12
               

               
Conread position:
               
10-372
               

               
Cow position:
               
chr3:56582654-56583032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 48
               

               
Conread position:
               
11-273
               

               
Cow position:
               
chr3:56558-56300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
182, 45
               

               
Conread position:
               
12-363
               

               
Cow position:
               
chr3:19792711-19793072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
136, 15
               

               
Conread position:
               
13-278
               

               
Cow position:
               
chr3:49790994-49790731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
22, 14
               

               
Conread position:
               
13-351
               

               
Cow position:
               
chr3:74079825-74079475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
23, 45
               

               
Conread position:
               
13-363
               

               
Cow position:
               
chr3:49119213-49118855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
29, 148
               

               
Conread position:
               
13-363
               

               
Cow position:
               
chr3:65058516-65058874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 81
               

               
Conread position:
               
13-367
               

               
Cow position:
               
chr3:26739604-26739244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
22, 124
               

               
Conread position:
               
13-367
               

               
Cow position:
               
chr3:71231212-71231577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 44
               

               
Conread position:
               
13-371
               

               
Cow position:
               
chr3:50768496-50768863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
23, 45
               

               
Conread position:
               
13-372
               

               
Cow position:
               
chr3:23735285-23734905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
27, 89
               

               
Conread position:
               
13-372
               

               
Cow position:
               
chr3:53790723-53790360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
21, 45
               

               
Conread position:
               
14-372
               

               
Cow position:
               
chr3:1830754-1830389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
22, 58
               

               
Conread position:
               
17-354
               

               
Cow position:
               
chr3:72232-72586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
13, 50
               

               
Conread position:
               
17-363
               

               
Cow position:
               
chr3:3649402-3649064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 128
               

               
Conread position:
               
18-206
               

               
Cow position:
               
chr3:17952479-17952663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
46, 16
               

               
Conread position:
               
18-207
               

               
Cow position:
               
chr3:15859848-15859659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
16, 52
               

               
Conread position:
               
18-254
               

               
Cow position:
               
chr3:34937662-34937902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
18, 179
               

               
Conread position:
               
18-270
               

               
Cow position:
               
chr3:63269044-63269297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
18-272
               

               
Cow position:
               
chr3:46901015-46901274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
18, 118
               

               
Conread position:
               
18-273
               

               
Cow position:
               
chr3:66884122-66883867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
18, 115
               

               
Conread position:
               
18-274
               

               
Cow position:
               
chr3:61840097-61840353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 39
               

               
Conread position:
               
18-278
               

               
Cow position:
               
chr3:2680335-2680594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 118
               

               
Conread position:
               
18-324
               

               
Cow position:
               
chr3:54100899-54100598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
16, 39
               

               
Conread position:
               
18-326
               

               
Cow position:
               
chr3:15751903-15751576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 187
               

               
Conread position:
               
18-339
               

               
Cow position:
               
chr3:72390903-72391238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
17, 122
               

               
Conread position:
               
18-351
               

               
Cow position:
               
chr3:53046838-53046495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 85
               

               
Conread position:
               
18-358
               

               
Cow position:
               
chr3:57273885-57274228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
18, 53
               

               
Conread position:
               
18-360
               

               
Cow position:
               
chr3:53836866-53836538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
14, 53
               

               
Conread position:
               
18-361
               

               
Cow position:
               
chr3:64281113-64280765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
18, 42
               

               
Conread position:
               
18-361
               

               
Cow position:
               
chr3:65236842-65237196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
13, 116
               

               
Conread position:
               
18-363
               

               
Cow position:
               
chr3:2025008-2025378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
30, 15
               

               
Conread position:
               
18-363
               

               
Cow position:
               
chr3:54881576-54881931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
18, 246
               

               
Conread position:
               
18-363
               

               
Cow position:
               
chr3:73394939-73395290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
18, 42
               

               
Conread position:
               
18-364
               

               
Cow position:
               
chr3:14601894-14601536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
18, 43
               

               
Conread position:
               
18-365
               

               
Cow position:
               
chr3:57577517-57577873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 89
               

               
Conread position:
               
18-367
               

               
Cow position:
               
chr3:34096137-34095792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
18, 110
               

               
Conread position:
               
18-367
               

               
Cow position:
               
chr3:83490902-83491259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
15, 93
               

               
Conread position:
               
18-368
               

               
Cow position:
               
chr3:57764046-57764396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
16, 52
               

               
Conread position:
               
18-368
               

               
Cow position:
               
chr3:71497322-71496947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
18-369
               

               
Cow position:
               
chr3:14598769-14599101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
18, 80
               

               
Conread position:
               
18-370
               

               
Cow position:
               
chr3:5365490-5365848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 131
               

               
Conread position:
               
18-370
               

               
Cow position:
               
chr3:53270647-53271015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 125
               

               
Conread position:
               
18-370
               

               
Cow position:
               
chr3:63315954-63316310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 85
               

               
Conread position:
               
18-370
               

               
Cow position:
               
chr3:75687620-75687254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
18, 43
               

               
Conread position:
               
18-371
               

               
Cow position:
               
chr3:45667528-45667162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
61, 5
               

               
Conread position:
               
18-372
               

               
Cow position:
               
chr3:13302029-13301664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
14, 6
               

               
Conread position:
               
18-372
               

               
Cow position:
               
chr3:62999182-62998809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
18, 98
               

               
Conread position:
               
19-363
               

               
Cow position:
               
chr3:2393142-2392794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 125
               

               
Conread position:
               
19-363
               

               
Cow position:
               
chr3:75853511-75853160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
17, 51
               

               
Conread position:
               
19-372
               

               
Cow position:
               
chr3:8393170-8393521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
17, 104
               

               
Conread position:
               
20-361
               

               
Cow position:
               
chr3:59597006-59597346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
16, 48
               

               
Conread position:
               
20-361
               

               
Cow position:
               
chr3:76922842-76922500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
16, 50
               

               
Conread position:
               
20-363
               

               
Cow position:
               
chr3:53384463-53384105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
16, 63
               

               
Conread position:
               
20-367
               

               
Cow position:
               
chr3:22232831-22232489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
13, 105
               

               
Conread position:
               
20-367
               

               
Cow position:
               
chr3:76172839-76172502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
16, 75
               

               
Conread position:
               
20-372
               

               
Cow position:
               
chr3:70762302-70761939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
16, 50
               

               
Conread position:
               
21-363
               

               
Cow position:
               
chr3:70334137-70333794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 19
               

               
Conread position:
               
25-370
               

               
Cow position:
               
chr3:9663341-9662986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
23, 8
               

               
Conread position:
               
26-370
               

               
Cow position:
               
chr3:71478423-71478774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
110, 41
               

               
Conread position:
               
33-361
               

               
Cow position:
               
chr3:68616488-68616162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
12, 34
               

               
Conread position:
               
34-336
               

               
Cow position:
               
chr3:53739348-53739049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
30, 21
               

               
Conread position:
               
34-363
               

               
Cow position:
               
chr3:15655310-15654994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
10, 33
               

               
Conread position:
               
34-363
               

               
Cow position:
               
chr3:58765239-58764911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
122, 31
               

               
Conread position:
               
35-351
               

               
Cow position:
               
chr3:75238299-75238623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
26, 9
               

               
Conread position:
               
35-364
               

               
Cow position:
               
chr3:59610882-59610543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 32
               

               
Conread position:
               
35-365
               

               
Cow position:
               
chr3:35153460-35153783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
122, 40
               

               
Conread position:
               
35-368
               

               
Cow position:
               
chr3:58960750-58960412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
12, 104
               

               
Conread position:
               
37-334
               

               
Cow position:
               
chr3:84199520-84199810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
168, 18
               

               
Conread position:
               
39-363
               

               
Cow position:
               
chr3:24468536-24468209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 101
               

               
Conread position:
               
41-349
               

               
Cow position:
               
chr3:79271112-79270809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
152, 7
               

               
Conread position:
               
41-351
               

               
Cow position:
               
chr3:19793746-19793427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 84
               

               
Conread position:
               
41-361
               

               
Cow position:
               
chr3:3032251-3032582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 15
               

               
Conread position:
               
41-370
               

               
Cow position:
               
chr3:2648667-2648327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 60
               

               
Conread position:
               
41-371
               

               
Cow position:
               
chr3:81039899-81039563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
150, 15
               

               
Conread position:
               
42-351
               

               
Cow position:
               
chr3:82056263-82055965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
186, 99
               

               
Conread position:
               
42-367
               

               
Cow position:
               
chr3:58527245-58527557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
17, 31
               

               
Conread position:
               
42-370
               

               
Cow position:
               
chr3:15153540-15153872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
112, 23
               

               
Conread position:
               
42-372
               

               
Cow position:
               
chr3:23920582-23920241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 21
               

               
Conread position:
               
42-372
               

               
Cow position:
               
chr3:76268134-76267789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
42-372
               

               
Cow position:
               
chr3:77581956-77582292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
186, 14
               

               
Conread position:
               
47-359
               

               
Cow position:
               
chr3:17058690-17058376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
131, 94
               

               
Conread position:
               
48-220
               

               
Cow position:
               
chr3:74500090-74500265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
48-272
               

               
Cow position:
               
chr3:61278767-61278984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
140, 88
               

               
Conread position:
               
48-356
               

               
Cow position:
               
chr3:1890257-1889938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
145, 56
               

               
Conread position:
               
48-363
               

               
Cow position:
               
chr3:1517663-1517338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
24, 76
               

               
Conread position:
               
48-367
               

               
Cow position:
               
chr3:79271871-79271529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
24, 124
               

               
Conread position:
               
48-368
               

               
Cow position:
               
chr3:48900485-48900150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
106, 8
               

               
Conread position:
               
48-372
               

               
Cow position:
               
chr3:60389618-60389937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
24, 79
               

               
Conread position:
               
49-367
               

               
Cow position:
               
chr3:34871422-34871747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
108, 7
               

               
Conread position:
               
49-372
               

               
Cow position:
               
chr3:74846859-74846541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
18, 62
               

               
Conread position:
               
50-367
               

               
Cow position:
               
chr3:48468033-48468356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
21, 73
               

               
Conread position:
               
51-363
               

               
Cow position:
               
chr3:32610104-32610419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
13, 167
               

               
Conread position:
               
51-372
               

               
Cow position:
               
chr3:15443875-15443544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 90
               

               
Conread position:
               
53-366
               

               
Cow position:
               
chr3:51033227-51033550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
144, 56
               

               
Conread position:
               
53-367
               

               
Cow position:
               
chr3:21015103-21014777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
59, 18
               

               
Conread position:
               
54-308
               

               
Cow position:
               
chr3:43726933-43727194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
8, 35
               

               
Conread position:
               
55-273
               

               
Cow position:
               
chr3:5366629-5366845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
137, 78
               

               
Conread position:
               
55-367
               

               
Cow position:
               
chr3:3883961-3883641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
9, 78
               

               
Conread position:
               
56-265
               

               
Cow position:
               
chr3:80468816-80468609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
56-359
               

               
Cow position:
               
chr3:3889707-3889406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
101, 50
               

               
Conread position:
               
56-359
               

               
Cow position:
               
chr3:20993670-20993966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 64
               

               
Conread position:
               
56-370
               

               
Cow position:
               
chr3:47417707-47417387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
8, 90
               

               
Conread position:
               
58-277
               

               
Cow position:
               
chr3:33329672-33329898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 71
               

               
Conread position:
               
60-367
               

               
Cow position:
               
chr3:11276706-11276421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
135, 7
               

               
Conread position:
               
64-369
               

               
Cow position:
               
chr3:48459468-48459148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
66-278
               

               
Cow position:
               
chr3:22509896-22510106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
132, 66
               

               
Conread position:
               
66-360
               

               
Cow position:
               
chr3:61116988-61116700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 105
               

               
Conread position:
               
66-363
               

               
Cow position:
               
chr3:72342114-72342423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
127, 67
               

               
Conread position:
               
66-363
               

               
Cow position:
               
chr3:73237064-73237358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
54, 28
               

               
Conread position:
               
66-369
               

               
Cow position:
               
chr3:174817-175125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
46, 57
               

               
Conread position:
               
66-369
               

               
Cow position:
               
chr3:55177881-55177570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
66-369
               

               
Cow position:
               
chr3:76155857-76156167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
117, 61
               

               
Conread position:
               
67-367
               

               
Cow position:
               
chr3:35056108-35055796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
126, 69
               

               
Conread position:
               
67-367
               

               
Cow position:
               
chr3:51402779-51403075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
199, 77
               

               
Conread position:
               
67-370
               

               
Cow position:
               
chr3:42796638-42796336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
96, 51
               

               
Conread position:
               
68-363
               

               
Cow position:
               
chr3:14194307-14194015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
75, 9
               

               
Conread position:
               
71-361
               

               
Cow position:
               
chr3:13380412-13380105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
36, 49
               

               
Conread position:
               
71-363
               

               
Cow position:
               
chr3:22221195-22221501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
80, 6
               

               
Conread position:
               
71-364
               

               
Cow position:
               
chr3:61224868-61224573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
135, 35
               

               
Conread position:
               
71-368
               

               
Cow position:
               
chr3:59604725-59605022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
157, 33
               

               
Conread position:
               
71-369
               

               
Cow position:
               
chr3:46146857-46146547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
122, 28
               

               
Conread position:
               
73-370
               

               
Cow position:
               
chr3:31225316-31225605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
124, 15
               

               
Conread position:
               
74-363
               

               
Cow position:
               
chr3:45700684-45700977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
119, 62
               

               
Conread position:
               
79-367
               

               
Cow position:
               
chr3:3656393-3656696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
18, 65
               

               
Conread position:
               
81-358
               

               
Cow position:
               
chr3:73837832-73837548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
97, 113
               

               
Conread position:
               
85-372
               

               
Cow position:
               
chr3:18059590-18059890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
125, 33
               

               
Conread position:
               
86-297
               

               
Cow position:
               
chr3:27727940-27727730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
113, 20
               

               
Conread position:
               
87-367
               

               
Cow position:
               
chr3:26505698-26505414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
110, 22
               

               
Conread position:
               
87-370
               

               
Cow position:
               
chr3:4268692-4268391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
90, 45
               

               
Conread position:
               
90-361
               

               
Cow position:
               
chr3:83988425-83988707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
109, 11
               

               
Conread position:
               
90-370
               

               
Cow position:
               
chr3:10841708-10841998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
98, 7
               

               
Conread position:
               
91-365
               

               
Cow position:
               
chr3:22165523-22165237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
121, 41
               

               
Conread position:
               
98-273
               

               
Cow position:
               
chr3:81277570-81277391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
109-369
               

               
Cow position:
               
chr3:39873784-39873527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
53, 35
               

               
Conread position:
               
110-362
               

               
Cow position:
               
chr3:23804430-23804676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 25
               

               
Conread position:
               
110-363
               

               
Cow position:
               
chr3:75778148-75777894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
96, 26
               

               
Conread position:
               
114-363
               

               
Cow position:
               
chr3:3275514-3275770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 28
               

               
Conread position:
               
116-370
               

               
Cow position:
               
chr3:39606104-39605830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
75, 16
               

               
Conread position:
               
119-367
               

               
Cow position:
               
chr3:23203313-23203051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
34, 47
               

               
Conread position:
               
119-367
               

               
Cow position:
               
chr3:27976604-27976343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
74, 26
               

               
Conread position:
               
119-371
               

               
Cow position:
               
chr3:75608419-75608671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
108, 158
               

               
Conread position:
               
120-359
               

               
Cow position:
               
chr3:14546924-14547170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
121-371
               

               
Cow position:
               
chr3:26792398-26792637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
161, 16
               

               
Conread position:
               
137-348
               

               
Cow position:
               
chr3:39988299-39988092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
91, 50
               

               
Conread position:
               
140-367
               

               
Cow position:
               
chr3:76269828-76270067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
18, 111
               

               
Conread position:
               
142-372
               

               
Cow position:
               
chr3:16107417-16107191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
8, 62
               

               
Conread position:
               
144-359
               

               
Cow position:
               
chr3:40100771-40100558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
55, 14
               

               
Conread position:
               
144-367
               

               
Cow position:
               
chr3:83889191-83889429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
144-372
               

               
Cow position:
               
chr3:6182277-6182049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
84, 66
               

               
Conread position:
               
145-340
               

               
Cow position:
               
chr3:33048450-33048240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
145-359
               

               
Cow position:
               
chr3:81234334-81234559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
145-362
               

               
Cow position:
               
chr3:39996946-39996720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
48, 133
               

               
Conread position:
               
145-363
               

               
Cow position:
               
chr3:21867093-21866863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
54, 176
               

               
Conread position:
               
145-368
               

               
Cow position:
               
chr3:72027580-72027820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
20, 57
               

               
Conread position:
               
145-370
               

               
Cow position:
               
chr3:35074826-35075054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
145-372
               

               
Cow position:
               
chr3:12090618-12090862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
44, 97
               

               
Conread position:
               
145-372
               

               
Cow position:
               
chr3:29334472-29334227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
31, 229
               

               
Conread position:
               
146-336
               

               
Cow position:
               
chr3:46266147-46266351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 24
               

               
Conread position:
               
146-362
               

               
Cow position:
               
chr3:25477752-25477966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
84, 61
               

               
Conread position:
               
146-363
               

               
Cow position:
               
chr3:79272628-79272401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
11, 134
               

               
Conread position:
               
146-364
               

               
Cow position:
               
chr3:56949142-56948920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
51, 129
               

               
Conread position:
               
146-372
               

               
Cow position:
               
chr3:15861941-15862180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 143
               

               
Conread position:
               
147-358
               

               
Cow position:
               
chr3:10668932-10668709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
81, 59
               

               
Conread position:
               
147-363
               

               
Cow position:
               
chr3:30357470-30357684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
52, 18
               

               
Conread position:
               
147-366
               

               
Cow position:
               
chr3:8540470-8540679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
119, 45
               

               
Conread position:
               
147-367
               

               
Cow position:
               
chr3:27083104-27082861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
147-367
               

               
Cow position:
               
chr3:40213086-40212855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
46, 36
               

               
Conread position:
               
147-369
               

               
Cow position:
               
chr3:11281713-11281950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
148-359
               

               
Cow position:
               
chr3:54067744-54067965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
5, 46
               

               
Conread position:
               
149-351
               

               
Cow position:
               
chr3:1028697-1028484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
39, 46
               

               
Conread position:
               
149-363
               

               
Cow position:
               
chr3:23132220-23131993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
151-363
               

               
Cow position:
               
chr3:1011437-1011667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
151-372
               

               
Cow position:
               
chr3:49996772-49996533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
151-372
               

               
Cow position:
               
chr3:61024073-61023837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
15, 220
               

               
Conread position:
               
151-372
               

               
Cow position:
               
chr3:68303267-68303502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
153-357
               

               
Cow position:
               
chr3:70756692-70756470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
11, 33
               

               
Conread position:
               
157-370
               

               
Cow position:
               
chr3:39912732-39912504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 142
               

               
Conread position:
               
158-363
               

               
Cow position:
               
chr3:28897061-28896846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
70, 36
               

               
Conread position:
               
161-363
               

               
Cow position:
               
chr3:23640311-23640514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
67, 14
               

               
Conread position:
               
161-365
               

               
Cow position:
               
chr3:15160481-15160694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
163-363
               

               
Cow position:
               
chr3:78071829-78071617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
28, 112
               

               
Conread position:
               
164-359
               

               
Cow position:
               
chr3:41863588-41863793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
164-359
               

               
Cow position:
               
chr3:46792349-46792554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 152
               

               
Conread position:
               
164-362
               

               
Cow position:
               
chr3:15973530-15973744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
164-363
               

               
Cow position:
               
chr3:3698623-3698819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
35, 78
               

               
Conread position:
               
164-363
               

               
Cow position:
               
chr3:54905582-54905781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
64, 40
               

               
Conread position:
               
164-365
               

               
Cow position:
               
chr3:54297518-54297303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
164-372
               

               
Cow position:
               
chr3:10732854-10733060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
21, 119
               

               
Conread position:
               
167-363
               

               
Cow position:
               
chr3:26783538-26783332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 28
               

               
Conread position:
               
169-362
               

               
Cow position:
               
chr3:23753469-23753658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
57, 25
               

               
Conread position:
               
169-363
               

               
Cow position:
               
chr3:4120397-4120196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
29, 110
               

               
Conread position:
               
169-363
               

               
Cow position:
               
chr3:11229396-11229195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 167
               

               
Conread position:
               
169-363
               

               
Cow position:
               
chr3:19900623-19900831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
169-367
               

               
Cow position:
               
chr3:5703147-5703355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
29, 61
               

               
Conread position:
               
169-368
               

               
Cow position:
               
chr3:28902790-28902582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
170-354
               

               
Cow position:
               
chr3:42967408-42967226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 119
               

               
Conread position:
               
170-369
               

               
Cow position:
               
chr3:4071793-4071586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
58, 23
               

               
Conread position:
               
170-372
               

               
Cow position:
               
chr3:8523181-8522970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
10, 27
               

               
Conread position:
               
171-363
               

               
Cow position:
               
chr3:14518108-14517906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 143
               

               
Conread position:
               
173-357
               

               
Cow position:
               
chr3:77171289-77171487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
175-360
               

               
Cow position:
               
chr3:46559740-46559544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
175-365
               

               
Cow position:
               
chr3:76056310-76056111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
175-367
               

               
Cow position:
               
chr3:18831396-18831598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
18, 108
               

               
Conread position:
               
175-372
               

               
Cow position:
               
chr3:82195461-82195668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
30, 81
               

               
Conread position:
               
176-363
               

               
Cow position:
               
chr3:27246983-27246792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
176-367
               

               
Cow position:
               
chr3:43389150-43388945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
176-369
               

               
Cow position:
               
chr3:16710823-16710614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
176-371
               

               
Cow position:
               
chr3:9718275-9718066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
176-371
               

               
Cow position:
               
chr3:75966805-75966598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
52, 30
               

               
Conread position:
               
177-363
               

               
Cow position:
               
chr3:53604769-53604569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
177-371
               

               
Cow position:
               
chr3:27286497-27286699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
11, 18
               

               
Conread position:
               
177-372
               

               
Cow position:
               
chr3:47199150-47198941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 150
               

               
Conread position:
               
178-372
               

               
Cow position:
               
chr3:31115292-31115093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
28, 101
               

               
Conread position:
               
179-361
               

               
Cow position:
               
chr3:59271812-59272004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
179-363
               

               
Cow position:
               
chr3:985993-986190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
179-367
               

               
Cow position:
               
chr3:13882542-13882338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
179-367
               

               
Cow position:
               
chr3:18700132-18699928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
179-367
               

               
Cow position:
               
chr3:59947646-59947848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
179-369
               

               
Cow position:
               
chr3:35883953-35883750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
47, 10
               

               
Conread position:
               
179-370
               

               
Cow position:
               
chr3:10591522-10591332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
179-371
               

               
Cow position:
               
chr3:58101658-58101858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 66
               

               
Conread position:
               
179-371
               

               
Cow position:
               
chr3:70402623-70402821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
179-372
               

               
Cow position:
               
chr3:62789973-62789768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
180-363
               

               
Cow position:
               
chr3:23037527-23037333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 147
               

               
Conread position:
               
180-367
               

               
Cow position:
               
chr3:423351-423549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
48, 13
               

               
Conread position:
               
180-372
               

               
Cow position:
               
chr3:29234700-29234494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
7, 17
               

               
Conread position:
               
181-367
               

               
Cow position:
               
chr3:59681923-59681728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
182-354
               

               
Cow position:
               
chr3:28884179-28883996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
11, 72
               

               
Conread position:
               
182-354
               

               
Cow position:
               
chr3:62370037-62370223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
183-371
               

               
Cow position:
               
chr3:79893513-79893312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
184-365
               

               
Cow position:
               
chr3:25735922-25735726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
185-363
               

               
Cow position:
               
chr3:21050687-21050495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
187-363
               

               
Cow position:
               
chr3:51150118-51150305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
41, 7
               

               
Conread position:
               
187-367
               

               
Cow position:
               
chr3:59317692-59317880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 7
               

               
Conread position:
               
187-371
               

               
Cow position:
               
chr3:76168642-76168446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 7
               

               
Conread position:
               
191-360
               

               
Cow position:
               
chr3:31489713-31489878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
37, 25
               

               
Conread position:
               
192-367
               

               
Cow position:
               
chr3:73514054-73513883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
36, 95
               

               
Conread position:
               
193-350
               

               
Cow position:
               
chr3:6579483-6579642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
35, 21
               

               
Conread position:
               
193-363
               

               
Cow position:
               
chr3:60370977-60371159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 142
               

               
Conread position:
               
193-363
               

               
Cow position:
               
chr3:73925038-73924865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
80, 25
               

               
Conread position:
               
193-367
               

               
Cow position:
               
chr3:26339436-26339261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 33
               

               
Conread position:
               
193-367
               

               
Cow position:
               
chr3:35802946-35802756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
193-371
               

               
Cow position:
               
chr3:78258760-78258566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
194-363
               

               
Cow position:
               
chr3:28904966-28905148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
194-363
               

               
Cow position:
               
chr3:70333225-70333054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
194-363
               

               
Cow position:
               
chr3:84154411-84154580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
32, 26
               

               
Conread position:
               
194-365
               

               
Cow position:
               
chr3:19044770-19044591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 80
               

               
Conread position:
               
194-367
               

               
Cow position:
               
chr3:3164114-3163935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
34, 131
               

               
Conread position:
               
194-367
               

               
Cow position:
               
chr3:15859383-15859201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
34, 70
               

               
Conread position:
               
194-367
               

               
Cow position:
               
chr3:55730473-55730286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
194-367
               

               
Cow position:
               
chr3:59885536-59885711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
39, 29
               

               
Conread position:
               
194-367
               

               
Cow position:
               
chr3:80958515-80958330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
194-370
               

               
Cow position:
               
chr3:64800554-64800364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
194-372
               

               
Cow position:
               
chr3:80910591-80910782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
195-363
               

               
Cow position:
               
chr3:635174-635353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 141
               

               
Conread position:
               
195-363
               

               
Cow position:
               
chr3:76300767-76300949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
195-366
               

               
Cow position:
               
chr3:83934722-83934903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
195-369
               

               
Cow position:
               
chr3:16362508-16362333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 83
               

               
Conread position:
               
195-370
               

               
Cow position:
               
chr3:24220581-24220396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
195-371
               

               
Cow position:
               
chr3:8147528-8147342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
35, 10
               

               
Conread position:
               
195-372
               

               
Cow position:
               
chr3:25702345-25702147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
196-368
               

               
Cow position:
               
chr3:2016433-2016612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
34, 76
               

               
Conread position:
               
196-370
               

               
Cow position:
               
chr3:61680315-61680499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
77, 32
               

               
Conread position:
               
197-371
               

               
Cow position:
               
chr3:6049290-6049103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
200-371
               

               
Cow position:
               
chr3:2538242-2538419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 168
               

               
Conread position:
               
209-372
               

               
Cow position:
               
chr3:3453590-3453764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 169
               

               
Conread position:
               
210-370
               

               
Cow position:
               
chr3:51153057-51153226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
18, 126
               

               
Conread position:
               
210-372
               

               
Cow position:
               
chr3:19611340-19611168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
214-363
               

               
Cow position:
               
chr3:44594637-44594798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 153
               

               
Conread position:
               
214-363
               

               
Cow position:
               
chr3:56754517-56754360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 25
               

               
Conread position:
               
214-363
               

               
Cow position:
               
chr3:64910080-64909920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
214-372
               

               
Cow position:
               
chr3:59699635-59699465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
214-372
               

               
Cow position:
               
chr3:74050686-74050522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
217-372
               

               
Cow position:
               
chr3:49787577-49787739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 156
               

               
Conread position:
               
218-359
               

               
Cow position:
               
chr3:4518163-4518013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
218-363
               

               
Cow position:
               
chr3:31804739-31804595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
10, 42
               

               
Conread position:
               
218-363
               

               
Cow position:
               
chr3:77098803-77098649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
220-365
               

               
Cow position:
               
chr3:44218787-44218945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
225-365
               

               
Cow position:
               
chr3:45168597-45168739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
227-372
               

               
Cow position:
               
chr3:24370432-24370574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
51, 106
               

               
Conread position:
               
228-363
               

               
Cow position:
               
chr3:53249520-53249660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
229-359
               

               
Cow position:
               
chr3:22903720-22903587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
229-360
               

               
Cow position:
               
chr3:11607855-11607989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 9
               

               
Conread position:
               
229-370
               

               
Cow position:
               
chr3:69849260-69849115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
57, 46
               

               
Conread position:
               
233-365
               

               
Cow position:
               
chr3:34392184-34392048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
42, 21
               

               
Conread position:
               
238-372
               

               
Cow position:
               
chr3:55973036-55972898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
43, 37
               

               
Conread position:
               
241-363
               

               
Cow position:
               
chr3:37641371-37641501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
245-367
               

               
Cow position:
               
chr3:40794661-40794539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
117, 30
               

               
Conread position:
               
252-360
               

               
Cow position:
               
chr3:72649921-72649814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
256-363
               

               
Cow position:
               
chr3:41746429-41746325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
265-365
               

               
Cow position:
               
chr3:7408515-7408615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
269-363
               

               
Cow position:
               
chr3:22078159-22078253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
269-367
               

               
Cow position:
               
chr3:52499115-52499016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
269-368
               

               
Cow position:
               
chr3:42933564-42933664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
270-361
               

               
Cow position:
               
chr3:72910993-72910902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
92
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
270-363
               

               
Cow position:
               
chr3:10453926-10454019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
94
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
270-363
               

               
Cow position:
               
chr3:33460517-33460424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
94
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
270-363
               

               
Cow position:
               
chr3:45183739-45183646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
94
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
270-367
               

               
Cow position:
               
chr3:29385951-29386049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
270-370
               

               
Cow position:
               
chr3:33426-33324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
270-370
               

               
Cow position:
               
chr3:18764188-18764287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
270-370
               

               
Cow position:
               
chr3:52147359-52147259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
27, 42
               

               
Conread position:
               
270-371
               

               
Cow position:
               
chr3:66563867-66563968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
270-372
               

               
Cow position:
               
chr3:56972283-56972386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
270-372
               

               
Cow position:
               
chr3:59926715-59926818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
270-372
               

               
Cow position:
               
chr3:62739287-62739389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
270-372
               

               
Cow position:
               
chr3:72626660-72626558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
271-363
               

               
Cow position:
               
chr3:58562784-58562876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
283-370
               

               
Cow position:
               
chr3:42348177-42348264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
88
               

               
Alignm identity:
               
76
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.