Cow genome map


           Conread name:
           Ss1.1-Emb1-C0005178_H07.5
        

               Conread position:
               38-708
               

               Cow position:
               chr16:25340666-25341362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               715
               

               Alignm identity:
               443
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               70, 42
               

               Conread position:
               64-708
               

               Cow position:
               chr16:29045744-29046419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               685
               

               Alignm identity:
               413
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               23, 37
               

               Conread position:
               88-372
               

               Cow position:
               chr16:36355859-36355570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               129, 15
               

               Conread position:
               106-708
               

               Cow position:
               chr16:15491473-15492105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               641
               

               Alignm identity:
               393
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               29, 81
               

               Conread position:
               143-708
               

               Cow position:
               chr16:8817303-8816707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               606
               

               Alignm identity:
               375
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               36, 9
               

               Conread position:
               158-693
               

               Cow position:
               chr16:26518185-26517628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               566
               

               Alignm identity:
               360
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               43, 239
               

               Conread position:
               270-708
               

               Cow position:
               chr16:27734867-27734406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               284
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               45, 80
               

               Conread position:
               464-674
               

               Cow position:
               chr16:4366312-4366517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               27, 93
               
Show alignments to all cow chromosomes.