Cow genome map
| Conread name: | Ss1.1-Emb1-C0005178_H07.5 |
| Conread position: | 1-351 |
| Cow position: | chr18:29748366-29748010 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 177, 157 |
| Conread position: | 2-403 |
| Cow position: | chr18:33297434-33297843 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 290 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 84, 28 |
| Conread position: | 4-687 |
| Cow position: | chr18:24577677-24576981 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 6 |
| Conread position: | 9-404 |
| Cow position: | chr18:5653298-5653709 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 266 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 16, 23 |
| Conread position: | 14-706 |
| Cow position: | chr18:29069751-29070426 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 430 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 69, 43 |
| Conread position: | 28-706 |
| Cow position: | chr18:20832352-20833020 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 429 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 7, 25 |
| Conread position: | 30-399 |
| Cow position: | chr18:25992819-25993201 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 252 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 187, 122 |
| Conread position: | 64-708 |
| Cow position: | chr18:41841328-41840642 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 427 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 62 |
| Conread position: | 107-708 |
| Cow position: | chr18:28974354-28973720 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 399 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 22, 16 |
| Conread position: | 113-708 |
| Cow position: | chr18:23797218-23797830 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 375 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 19, 147 |
| Conread position: | 121-708 |
| Cow position: | chr18:29899889-29900488 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 398 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 56, 36 |
| Conread position: | 139-708 |
| Cow position: | chr18:43147332-43146743 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 362 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 87, 16 |
| Conread position: | 270-708 |
| Cow position: | chr18:14415701-14416159 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 284 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 181 |
| Conread position: | 311-708 |
| Cow position: | chr18:16533751-16534161 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 254 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 35, 46 |
| Conread position: | 328-708 |
| Cow position: | chr18:48221662-48222062 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 262 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 40, 18 |
| Conread position: | 331-708 |
| Cow position: | chr18:2019891-2019503 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 254 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 74, 15 |
| Conread position: | 332-705 |
| Cow position: | chr18:40695997-40695613 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 248 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 84, 223 |
| Conread position: | 332-708 |
| Cow position: | chr18:33358656-33359049 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 332-708 |
| Cow position: | chr18:39748370-39748761 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 48, 58 |
Show alignments to all cow chromosomes.