Cow genome map
| Conread name: | Ss1.1-Emb1-C0005178_H07.5 |
| Conread position: | 2-387 |
| Cow position: | chr28:581205-580821 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 119, 129 |
| Conread position: | 39-706 |
| Cow position: | chr28:11027474-11026833 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 439 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 167, 69 |
| Conread position: | 54-704 |
| Cow position: | chr28:5401926-5401267 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 426 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 164, 7 |
| Conread position: | 64-708 |
| Cow position: | chr28:2083053-2083730 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 423 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 40, 62 |
| Conread position: | 72-684 |
| Cow position: | chr28:9262648-9263241 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 386 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 216, 108 |
| Conread position: | 75-706 |
| Cow position: | chr28:17195863-17195245 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 411 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 53, 10 |
| Conread position: | 135-708 |
| Cow position: | chr28:10582451-10581852 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 377 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 44, 17 |
| Conread position: | 180-707 |
| Cow position: | chr28:7900937-7901488 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 345 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 22, 97 |
| Conread position: | 220-708 |
| Cow position: | chr28:21358633-21359136 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 310 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 69, 51 |
| Conread position: | 220-708 |
| Cow position: | chr28:24667226-24667714 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 307 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 118, 52 |
| Conread position: | 270-588 |
| Cow position: | chr28:8969682-8969989 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 141, 52 |
| Conread position: | 273-704 |
| Cow position: | chr28:24306979-24306535 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 83, 238 |
| Conread position: | 276-607 |
| Cow position: | chr28:767912-767572 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 70, 45 |
| Conread position: | 332-708 |
| Cow position: | chr28:9953875-9954267 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 82, 161 |
| Conread position: | 364-706 |
| Cow position: | chr28:27937665-27937321 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 119, 41 |
| Conread position: | 436-705 |
| Cow position: | chr28:33765159-33765433 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 27, 40 |
Show alignments to all cow chromosomes.