Cow genome map
Conread name: | Ss1.1-Emb1-C0005182_F21.5 |
Conread position: | 2-324 |
Cow position: | chr12:8311111-8311444 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 3-341 |
Cow position: | chr12:21941709-21942050 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 21 |
Conread position: | 3-347 |
Cow position: | chr12:26947053-26946703 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 245 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 27, 267 |
Conread position: | 35-324 |
Cow position: | chr12:22332602-22332887 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 9 |
Conread position: | 38-324 |
Cow position: | chr12:21197936-21198223 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 13 |
Conread position: | 51-325 |
Cow position: | chr12:32653533-32653812 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 51-346 |
Cow position: | chr12:21901930-21902225 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 9 |
Conread position: | 52-230 |
Cow position: | chr12:26141804-26141983 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 131 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 52-232 |
Cow position: | chr12:48405261-48405443 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 138 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 15, 35 |
Conread position: | 52-235 |
Cow position: | chr12:21207685-21207868 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 138 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 52-288 |
Cow position: | chr12:42859837-42859600 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 52-304 |
Cow position: | chr12:14662643-14662390 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 52-309 |
Cow position: | chr12:6406658-6406403 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 148 |
Conread position: | 52-309 |
Cow position: | chr12:8678132-8677873 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 52-309 |
Cow position: | chr12:11098232-11098490 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 196 |
Conread position: | 52-309 |
Cow position: | chr12:20998132-20997885 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 189 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 22, 66 |
Conread position: | 52-309 |
Cow position: | chr12:21426684-21426942 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 52-317 |
Cow position: | chr12:43031393-43031128 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 97 |
Conread position: | 52-324 |
Cow position: | chr12:45261606-45261886 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 52-325 |
Cow position: | chr12:37558545-37558824 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 52-347 |
Cow position: | chr12:2282536-2282830 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 274 |
Conread position: | 52-382 |
Cow position: | chr12:18501033-18501347 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 107 |
Conread position: | 52-419 |
Cow position: | chr12:21500106-21500457 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 250 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 22, 71 |
Conread position: | 52-480 |
Cow position: | chr12:15951274-15950855 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 100 |
Conread position: | 53-317 |
Cow position: | chr12:3360895-3361161 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 53-317 |
Cow position: | chr12:21254665-21254399 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 53-356 |
Cow position: | chr12:2838863-2838566 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 176 |
Conread position: | 54-288 |
Cow position: | chr12:25101069-25100834 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 183 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 54-309 |
Cow position: | chr12:252064-251810 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 115 |
Conread position: | 54-309 |
Cow position: | chr12:1402483-1402738 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 171 |
Conread position: | 54-309 |
Cow position: | chr12:22205754-22205500 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 76 |
Conread position: | 54-347 |
Cow position: | chr12:27932953-27932659 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 279 |
Conread position: | 54-347 |
Cow position: | chr12:28766027-28765736 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 257 |
Conread position: | 60-363 |
Cow position: | chr12:2797-3098 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 242 |
Conread position: | 61-323 |
Cow position: | chr12:33986162-33986426 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 250, 0 |
Conread position: | 72-404 |
Cow position: | chr12:34854786-34854463 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 221 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 277, 76 |
Conread position: | 116-324 |
Cow position: | chr12:5861209-5861416 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 166 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 82 |
Conread position: | 141-317 |
Cow position: | chr12:23240084-23240260 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 131 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 172, 79 |
Conread position: | 203-317 |
Cow position: | chr12:31544920-31545035 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 95 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 214-323 |
Cow position: | chr12:4157530-4157641 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 93 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 256-390 |
Cow position: | chr12:48405445-48405577 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 107 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 95, 49 |
Show alignments to all cow chromosomes.