Cow genome map
Conread name: | Ss1.1-Emb1-C0005182_F21.5 |
Conread position: | 2-317 |
Cow position: | chr25:11375378-11375048 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 3-317 |
Cow position: | chr25:26922199-26922517 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 291 |
Conread position: | 3-323 |
Cow position: | chr25:35362452-35362121 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 46 |
Conread position: | 3-324 |
Cow position: | chr25:17468725-17468395 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 263 |
Conread position: | 3-340 |
Cow position: | chr25:33665894-33665552 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 23 |
Conread position: | 3-347 |
Cow position: | chr25:26279236-26279589 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 316 |
Conread position: | 3-347 |
Cow position: | chr25:34347021-34346687 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 72 |
Conread position: | 4-324 |
Cow position: | chr25:18060617-18060295 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 228 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 28, 138 |
Conread position: | 4-421 |
Cow position: | chr25:33243812-33244213 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 114 |
Conread position: | 11-325 |
Cow position: | chr25:18195101-18194786 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 21 |
Conread position: | 52-270 |
Cow position: | chr25:18027591-18027372 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 169 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 52-288 |
Cow position: | chr25:25506685-25506920 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 140, 0 |
Conread position: | 52-297 |
Cow position: | chr25:12942666-12942420 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 52-309 |
Cow position: | chr25:13781064-13781322 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 52-317 |
Cow position: | chr25:20776864-20776601 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 202 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 22, 79 |
Conread position: | 52-317 |
Cow position: | chr25:27022532-27022265 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 52-317 |
Cow position: | chr25:32580000-32580266 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 181 |
Conread position: | 52-324 |
Cow position: | chr25:14016202-14016472 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 9 |
Conread position: | 52-324 |
Cow position: | chr25:18275799-18275521 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 52-325 |
Cow position: | chr25:17589514-17589242 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 33 |
Conread position: | 52-325 |
Cow position: | chr25:19917118-19917396 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 52-347 |
Cow position: | chr25:8674950-8675245 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 274 |
Conread position: | 52-415 |
Cow position: | chr25:23345305-23344952 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 178 |
Conread position: | 52-419 |
Cow position: | chr25:18093053-18093412 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 96 |
Conread position: | 52-421 |
Cow position: | chr25:11933491-11933125 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 35 |
Conread position: | 52-421 |
Cow position: | chr25:12759565-12759195 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 210 |
Conread position: | 53-324 |
Cow position: | chr25:34656410-34656139 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 77 |
Conread position: | 53-345 |
Cow position: | chr25:9544100-9544395 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 35 |
Conread position: | 54-285 |
Cow position: | chr25:20629614-20629834 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 179 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 20, 64 |
Conread position: | 54-304 |
Cow position: | chr25:22147531-22147782 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 54-347 |
Cow position: | chr25:18889978-18889685 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 40 |
Conread position: | 60-324 |
Cow position: | chr25:18303443-18303707 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 173 |
Conread position: | 61-343 |
Cow position: | chr25:36240599-36240875 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 191 |
Conread position: | 64-288 |
Cow position: | chr25:34014443-34014217 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 168 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 10, 141 |
Conread position: | 66-422 |
Cow position: | chr25:18255318-18254963 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 59 |
Conread position: | 72-286 |
Cow position: | chr25:18421723-18421939 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 151 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 137, 57 |
Conread position: | 89-395 |
Cow position: | chr25:19288266-19287967 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 214 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 264, 40 |
Conread position: | 171-331 |
Cow position: | chr25:17560478-17560321 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 130 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 132, 0 |
Conread position: | 172-323 |
Cow position: | chr25:6172058-6172211 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 123 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 139, 0 |
Conread position: | 207-309 |
Cow position: | chr25:24659444-24659546 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 84 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.