Cow genome map

Conread name: Ss1.1-Emb1-C0005182_F21.5

Conread position: 2-324
Cow position: chr5:29009114-29009445 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 256

Conread position: 2-394
Cow position: chr5:41529817-41529428 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 39

Conread position: 2-480
Cow position: chr5:46659486-46659963 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 18

Conread position: 3-309
Cow position: chr5:32733497-32733175 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 3-344
Cow position: chr5:45700039-45700384 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 70

Conread position: 7-298
Cow position: chr5:24330050-24330340 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 64

Conread position: 7-324
Cow position: chr5:3785563-3785877 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 223
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 23, 67

Conread position: 11-318
Cow position: chr5:27909488-27909186 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 12-394
Cow position: chr5:31202853-31202464 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 259
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 5, 170

Conread position: 20-269
Cow position: chr5:5786827-5786570 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 23-288
Cow position: chr5:73489770-73489505 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 172

Conread position: 32-289
Cow position: chr5:12644136-12643885 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 38-306
Cow position: chr5:57977065-57977332 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 19

Conread position: 51-324
Cow position: chr5:49119463-49119189 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 51-414
Cow position: chr5:51319424-51319068 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 234
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 47

Conread position: 52-192
Cow position: chr5:52805186-52805326 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 22, 36

Conread position: 52-195
Cow position: chr5:18665781-18665924 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 106
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 22, 140

Conread position: 52-216
Cow position: chr5:4088624-4088789 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 52-240
Cow position: chr5:58819815-58819626 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 22, 0

Conread position: 52-275
Cow position: chr5:1341974-1341755 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 141

Conread position: 52-288
Cow position: chr5:10918617-10918854 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-288
Cow position: chr5:31101778-31101555 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 185
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 22, 129

Conread position: 52-309
Cow position: chr5:14379982-14380239 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 220

Conread position: 52-309
Cow position: chr5:29042331-29042588 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 110

Conread position: 52-309
Cow position: chr5:46663822-46664080 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-309
Cow position: chr5:49518479-49518735 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 97

Conread position: 52-317
Cow position: chr5:2531090-2531357 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 111

Conread position: 52-317
Cow position: chr5:6589202-6588934 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr5:24576733-24577001 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 52-317
Cow position: chr5:34202759-34203021 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 36

Conread position: 52-317
Cow position: chr5:46775897-46776166 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-317
Cow position: chr5:59060440-59060704 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 102

Conread position: 52-323
Cow position: chr5:44459302-44459576 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-323
Cow position: chr5:46644506-46644780 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 52-323
Cow position: chr5:48468457-48468186 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 15

Conread position: 52-323
Cow position: chr5:59482073-59482344 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 160

Conread position: 52-324
Cow position: chr5:28007022-28007282 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 25, 49

Conread position: 52-324
Cow position: chr5:39164979-39164708 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 67

Conread position: 52-325
Cow position: chr5:4019379-4019101 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chr5:26079399-26079124 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chr5:31706395-31706671 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 97

Conread position: 52-325
Cow position: chr5:32772301-32772579 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-325
Cow position: chr5:47831285-47831016 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 42

Conread position: 52-325
Cow position: chr5:58195821-58196099 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-341
Cow position: chr5:32673924-32673633 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 276

Conread position: 52-344
Cow position: chr5:45182290-45181985 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-346
Cow position: chr5:28031296-28031591 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 291

Conread position: 52-347
Cow position: chr5:415903-415608 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 259

Conread position: 52-347
Cow position: chr5:3964289-3964574 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 213
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 26, 37

Conread position: 52-347
Cow position: chr5:4068809-4069102 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 144

Conread position: 52-347
Cow position: chr5:57482727-57482431 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 259

Conread position: 52-347
Cow position: chr5:64782199-64781903 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-349
Cow position: chr5:10776445-10776141 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-349
Cow position: chr5:54932399-54932095 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-353
Cow position: chr5:41962419-41962120 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 289

Conread position: 52-390
Cow position: chr5:14659275-14658942 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 231
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 24, 97

Conread position: 52-398
Cow position: chr5:29436150-29435790 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 207

Conread position: 52-406
Cow position: chr5:27489067-27489422 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 49

Conread position: 52-406
Cow position: chr5:52433790-52434141 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 66

Conread position: 52-408
Cow position: chr5:46630622-46630273 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 300

Conread position: 52-474
Cow position: chr5:14346561-14346139 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 276
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 22, 148

Conread position: 52-480
Cow position: chr5:49593636-49593207 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 53-230
Cow position: chr5:5317937-5317759 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 53-281
Cow position: chr5:61273361-61273138 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 53-321
Cow position: chr5:24108770-24108507 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 181
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 132

Conread position: 53-335
Cow position: chr5:27001431-27001710 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 12

Conread position: 53-395
Cow position: chr5:26068897-26068565 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 77

Conread position: 53-421
Cow position: chr5:39247562-39247221 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 77

Conread position: 54-173
Cow position: chr5:7273673-7273793 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 54-278
Cow position: chr5:6158373-6158152 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 20, 36

Conread position: 54-295
Cow position: chr5:3504429-3504187 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 54-304
Cow position: chr5:48808894-48808643 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr5:30579143-30579399 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-309
Cow position: chr5:37732167-37732423 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 54-343
Cow position: chr5:46738764-46738474 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 257

Conread position: 54-347
Cow position: chr5:24098470-24098764 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 257

Conread position: 54-349
Cow position: chr5:55627809-55628103 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 76

Conread position: 54-350
Cow position: chr5:2914272-2914566 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 194

Conread position: 54-353
Cow position: chr5:2430311-2430009 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 55-286
Cow position: chr5:26090009-26089778 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 193

Conread position: 60-210
Cow position: chr5:25206914-25206762 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 14, 51

Conread position: 60-324
Cow position: chr5:9686603-9686335 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 60-324
Cow position: chr5:20972205-20971954 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 199
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 14, 99

Conread position: 60-324
Cow position: chr5:41551100-41550834 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 60-324
Cow position: chr5:49182096-49182361 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 133

Conread position: 60-331
Cow position: chr5:27652159-27651883 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 60-336
Cow position: chr5:32945701-32945978 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 60-345
Cow position: chr5:26769638-26769921 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 139

Conread position: 61-392
Cow position: chr5:53626939-53626607 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 227
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 12, 200

Conread position: 66-395
Cow position: chr5:61020011-61019700 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 230
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 8, 96

Conread position: 66-407
Cow position: chr5:25000811-25000475 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 161

Conread position: 67-347
Cow position: chr5:33185611-33185885 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 194
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 163

Conread position: 72-235
Cow position: chr5:18653885-18654048 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 74-414
Cow position: chr5:23755779-23755453 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 216

Conread position: 75-321
Cow position: chr5:28022999-28023242 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 164, 140

Conread position: 80-414
Cow position: chr5:49129069-49129401 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 224
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 269, 93

Conread position: 81-390
Cow position: chr5:51771449-51771135 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 215
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 78, 0

Conread position: 83-278
Cow position: chr5:17774189-17773994 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 155
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 83-324
Cow position: chr5:4385108-4385338 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 176
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 23, 0

Conread position: 84-321
Cow position: chr5:39872259-39872491 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 159
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 226, 53

Conread position: 115-399
Cow position: chr5:76123696-76123407 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 214
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 199, 68

Conread position: 119-317
Cow position: chr5:27570000-27570197 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 155
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 25, 0

Conread position: 120-288
Cow position: chr5:34696490-34696659 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 138
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 150, 0

Conread position: 128-323
Cow position: chr5:10843523-10843326 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 183, 0

Conread position: 132-421
Cow position: chr5:23228130-23228415 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 12, 74

Conread position: 143-323
Cow position: chr5:9042949-9043131 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 168, 0

Conread position: 145-347
Cow position: chr5:54792722-54792520 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 172, 165

Conread position: 148-317
Cow position: chr5:23960399-23960229 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 137
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 163, 0

Conread position: 150-360
Cow position: chr5:18271526-18271734 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 97, 83

Conread position: 150-421
Cow position: chr5:27682826-27682549 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 87

Conread position: 157-421
Cow position: chr5:18117650-18117395 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 186
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 88, 0

Conread position: 160-307
Cow position: chr5:25206763-25206609 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 8

Conread position: 178-421
Cow position: chr5:27059178-27058932 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 178-421
Cow position: chr5:27060081-27059835 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 191-324
Cow position: chr5:6611970-6612103 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 193-325
Cow position: chr5:18665955-18666089 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 118, 0

Conread position: 193-480
Cow position: chr5:40053420-40053687 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 60

Conread position: 197-407
Cow position: chr5:56857757-56857545 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 123, 0

Conread position: 198-323
Cow position: chr5:10482814-10482941 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 113, 0

Conread position: 198-325
Cow position: chr5:18122502-18122371 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 113, 0

Conread position: 214-317
Cow position: chr5:35299835-35299939 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 97, 0

Conread position: 216-421
Cow position: chr5:14785819-14785607 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 175

Conread position: 219-323
Cow position: chr5:56145034-56144928 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 230-395
Cow position: chr5:7502912-7502747 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 121, 21

Conread position: 262-479
Cow position: chr5:61272828-61272620 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 59, 22

Show alignments to all cow chromosomes.