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Cow genome map

           
Conread name:
           
Ss1.1-Emb1-C0005188_J06.5
        

               
Conread position:
               
34-585
               

               
Cow position:
               
chr27:29831354-29831962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 63
               

               
Conread position:
               
35-334
               

               
Cow position:
               
chr27:12751357-12751677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
23, 61
               

               
Conread position:
               
36-359
               

               
Cow position:
               
chr27:15858764-15859101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 59
               

               
Conread position:
               
36-494
               

               
Cow position:
               
chr27:26412931-26413415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 56
               

               
Conread position:
               
48-386
               

               
Cow position:
               
chr27:23124044-23124401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
20, 12
               

               
Conread position:
               
56-543
               

               
Cow position:
               
chr27:1768334-1768833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 33
               

               
Conread position:
               
60-320
               

               
Cow position:
               
chr27:15342831-15343083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
7, 30
               

               
Conread position:
               
61-233
               

               
Cow position:
               
chr27:12191151-12191333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
54, 10
               

               
Conread position:
               
62-377
               

               
Cow position:
               
chr27:1521553-1521887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
58, 12
               

               
Conread position:
               
66-563
               

               
Cow position:
               
chr27:28518571-28518062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 23
               

               
Conread position:
               
67-556
               

               
Cow position:
               
chr27:22426536-22427059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
53, 425
               

               
Conread position:
               
67-570
               

               
Cow position:
               
chr27:18544291-18543750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 22
               

               
Conread position:
               
67-578
               

               
Cow position:
               
chr27:26433521-26434059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 22
               

               
Conread position:
               
69-275
               

               
Cow position:
               
chr27:264537-264320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
46, 20
               

               
Conread position:
               
69-577
               

               
Cow position:
               
chr27:20283914-20283398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 23
               

               
Conread position:
               
70-230
               

               
Cow position:
               
chr27:21283364-21283197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
54, 19
               

               
Conread position:
               
70-230
               

               
Cow position:
               
chr27:23502751-23502583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
46, 19
               

               
Conread position:
               
70-243
               

               
Cow position:
               
chr27:16984077-16983895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-256
               

               
Cow position:
               
chr27:3231416-3231221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-256
               

               
Cow position:
               
chr27:5882223-5882418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-256
               

               
Cow position:
               
chr27:13273720-13273912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-257
               

               
Cow position:
               
chr27:26785692-26785883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-258
               

               
Cow position:
               
chr27:6899425-6899626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
45, 22
               

               
Conread position:
               
70-258
               

               
Cow position:
               
chr27:23595560-23595364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-262
               

               
Cow position:
               
chr27:13902004-13902211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-264
               

               
Cow position:
               
chr27:427409-427208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
63, 19
               

               
Conread position:
               
70-271
               

               
Cow position:
               
chr27:15632687-15632477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
45, 22
               

               
Conread position:
               
70-286
               

               
Cow position:
               
chr27:1173253-1173481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-287
               

               
Cow position:
               
chr27:26545633-26545860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-299
               

               
Cow position:
               
chr27:20066072-20066310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
45, 25
               

               
Conread position:
               
70-305
               

               
Cow position:
               
chr27:17645908-17646153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
50, 19
               

               
Conread position:
               
70-305
               

               
Cow position:
               
chr27:18922740-18922491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
43, 19
               

               
Conread position:
               
70-305
               

               
Cow position:
               
chr27:30388926-30389178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
50, 19
               

               
Conread position:
               
70-306
               

               
Cow position:
               
chr27:9337803-9337557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
70-321
               

               
Cow position:
               
chr27:16030517-16030249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-330
               

               
Cow position:
               
chr27:13317675-13317943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
104, 19
               

               
Conread position:
               
70-334
               

               
Cow position:
               
chr27:21349458-21349735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-337
               

               
Cow position:
               
chr27:9988997-9988718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-337
               

               
Cow position:
               
chr27:11403198-11402924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-337
               

               
Cow position:
               
chr27:18446291-18446578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-337
               

               
Cow position:
               
chr27:19931443-19931160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-339
               

               
Cow position:
               
chr27:6454503-6454218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-340
               

               
Cow position:
               
chr27:5861495-5861203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
50, 19
               

               
Conread position:
               
70-340
               

               
Cow position:
               
chr27:9335071-9335357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-340
               

               
Cow position:
               
chr27:16620278-16619994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-341
               

               
Cow position:
               
chr27:1189523-1189810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-341
               

               
Cow position:
               
chr27:2298702-2298412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
50, 19
               

               
Conread position:
               
70-341
               

               
Cow position:
               
chr27:4881898-4881608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-341
               

               
Cow position:
               
chr27:4983311-4983601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-341
               

               
Cow position:
               
chr27:5836710-5836998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
43, 19
               

               
Conread position:
               
70-341
               

               
Cow position:
               
chr27:12097885-12097595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
50, 19
               

               
Conread position:
               
70-341
               

               
Cow position:
               
chr27:12549399-12549109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-341
               

               
Cow position:
               
chr27:14129793-14129506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-341
               

               
Cow position:
               
chr27:15033011-15032724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-341
               

               
Cow position:
               
chr27:15312488-15312206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-341
               

               
Cow position:
               
chr27:15644167-15644457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
50, 19
               

               
Conread position:
               
70-341
               

               
Cow position:
               
chr27:16182354-16182081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
49, 19
               

               
Conread position:
               
70-341
               

               
Cow position:
               
chr27:16305490-16305769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-341
               

               
Cow position:
               
chr27:19299685-19299395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-341
               

               
Cow position:
               
chr27:19423494-19423203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-341
               

               
Cow position:
               
chr27:19522828-19522538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-341
               

               
Cow position:
               
chr27:22655087-22655377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
50, 19
               

               
Conread position:
               
70-341
               

               
Cow position:
               
chr27:26330778-26331072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
30, 19
               

               
Conread position:
               
70-341
               

               
Cow position:
               
chr27:27521714-27522004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-341
               

               
Cow position:
               
chr27:28907356-28907068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-341
               

               
Cow position:
               
chr27:28984651-28984937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-342
               

               
Cow position:
               
chr27:11723614-11723902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
46, 22
               

               
Conread position:
               
70-342
               

               
Cow position:
               
chr27:26161795-26161507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 22
               

               
Conread position:
               
70-342
               

               
Cow position:
               
chr27:27141882-27141604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-344
               

               
Cow position:
               
chr27:2390585-2390292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-349
               

               
Cow position:
               
chr27:27040887-27040602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
101, 22
               

               
Conread position:
               
70-351
               

               
Cow position:
               
chr27:491177-490891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
43, 19
               

               
Conread position:
               
70-351
               

               
Cow position:
               
chr27:13182421-13182135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
44, 19
               

               
Conread position:
               
70-351
               

               
Cow position:
               
chr27:23454860-23455160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
35, 19
               

               
Conread position:
               
70-351
               

               
Cow position:
               
chr27:25924073-25923787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-351
               

               
Cow position:
               
chr27:26833463-26833189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
50, 22
               

               
Conread position:
               
70-357
               

               
Cow position:
               
chr27:8973326-8973630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
45, 21
               

               
Conread position:
               
70-362
               

               
Cow position:
               
chr27:16238186-16237894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
43, 19
               

               
Conread position:
               
70-362
               

               
Cow position:
               
chr27:26653595-26653291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
70-368
               

               
Cow position:
               
chr27:28276559-28276259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
43, 19
               

               
Conread position:
               
70-377
               

               
Cow position:
               
chr27:1522885-1523211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
45, 9
               

               
Conread position:
               
70-378
               

               
Cow position:
               
chr27:20137707-20138030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
50, 19
               

               
Conread position:
               
70-378
               

               
Cow position:
               
chr27:26796266-26795947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
50, 19
               

               
Conread position:
               
70-386
               

               
Cow position:
               
chr27:4824826-4825155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
50, 22
               

               
Conread position:
               
70-400
               

               
Cow position:
               
chr27:1675660-1675314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-400
               

               
Cow position:
               
chr27:3239722-3240072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
50, 19
               

               
Conread position:
               
70-400
               

               
Cow position:
               
chr27:20858999-20859342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-401
               

               
Cow position:
               
chr27:11413005-11412663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
45, 12
               

               
Conread position:
               
70-404
               

               
Cow position:
               
chr27:8291720-8292069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-404
               

               
Cow position:
               
chr27:27449147-27449502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-407
               

               
Cow position:
               
chr27:11255803-11255454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
46, 19
               

               
Conread position:
               
70-416
               

               
Cow position:
               
chr27:22399883-22399525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-418
               

               
Cow position:
               
chr27:23070073-23070440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-430
               

               
Cow position:
               
chr27:10579819-10580199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-444
               

               
Cow position:
               
chr27:9090511-9090901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-448
               

               
Cow position:
               
chr27:25380287-25379873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
70-462
               

               
Cow position:
               
chr27:7289819-7290231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-471
               

               
Cow position:
               
chr27:4805619-4806039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 22
               

               
Conread position:
               
70-483
               

               
Cow position:
               
chr27:30792640-30793079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 25
               

               
Conread position:
               
70-484
               

               
Cow position:
               
chr27:1123307-1122881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 13
               

               
Conread position:
               
70-499
               

               
Cow position:
               
chr27:815655-815191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 22
               

               
Conread position:
               
70-501
               

               
Cow position:
               
chr27:6074206-6073774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 23
               

               
Conread position:
               
70-502
               

               
Cow position:
               
chr27:4673305-4672843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 22
               

               
Conread position:
               
70-503
               

               
Cow position:
               
chr27:27064154-27064609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 19
               

               
Conread position:
               
70-509
               

               
Cow position:
               
chr27:15272196-15271746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
45, 22
               

               
Conread position:
               
70-509
               

               
Cow position:
               
chr27:20757768-20758205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-546
               

               
Cow position:
               
chr27:11535808-11536321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-553
               

               
Cow position:
               
chr27:20067692-20068196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 66
               

               
Conread position:
               
70-563
               

               
Cow position:
               
chr27:435532-435001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
45, 22
               

               
Conread position:
               
70-564
               

               
Cow position:
               
chr27:7958545-7959063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-564
               

               
Cow position:
               
chr27:21393217-21393725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
46, 19
               

               
Conread position:
               
70-566
               

               
Cow position:
               
chr27:30583027-30582506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 19
               

               
Conread position:
               
70-569
               

               
Cow position:
               
chr27:20636786-20637295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
70-570
               

               
Cow position:
               
chr27:26223979-26224494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-573
               

               
Cow position:
               
chr27:299093-299615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 21
               

               
Conread position:
               
70-575
               

               
Cow position:
               
chr27:1636657-1637169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
58, 19
               

               
Conread position:
               
70-576
               

               
Cow position:
               
chr27:15315779-15315279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-576
               

               
Cow position:
               
chr27:15927062-15926553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 16
               

               
Conread position:
               
70-576
               

               
Cow position:
               
chr27:16787122-16786587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-576
               

               
Cow position:
               
chr27:22603452-22602931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 23
               

               
Conread position:
               
70-576
               

               
Cow position:
               
chr27:30417964-30417450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-577
               

               
Cow position:
               
chr27:1903353-1902824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-577
               

               
Cow position:
               
chr27:24227503-24228049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
70-578
               

               
Cow position:
               
chr27:22440432-22439891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 19
               

               
Conread position:
               
70-580
               

               
Cow position:
               
chr27:20629318-20628811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 22
               

               
Conread position:
               
70-581
               

               
Cow position:
               
chr27:15871452-15870910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-581
               

               
Cow position:
               
chr27:27019813-27020344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-581
               

               
Cow position:
               
chr27:27460300-27460827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 22
               

               
Conread position:
               
70-581
               

               
Cow position:
               
chr27:28207088-28206556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 23
               

               
Conread position:
               
70-583
               

               
Cow position:
               
chr27:10582653-10582120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 21
               

               
Conread position:
               
70-584
               

               
Cow position:
               
chr27:8353754-8353243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 22
               

               
Conread position:
               
70-585
               

               
Cow position:
               
chr27:11435041-11435580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 168
               

               
Conread position:
               
70-585
               

               
Cow position:
               
chr27:15925625-15925090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
33, 19
               

               
Conread position:
               
70-586
               

               
Cow position:
               
chr27:17397165-17397705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 22
               

               
Conread position:
               
70-586
               

               
Cow position:
               
chr27:20828417-20828957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 19
               

               
Conread position:
               
70-586
               

               
Cow position:
               
chr27:22035087-22035627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 22
               

               
Conread position:
               
70-586
               

               
Cow position:
               
chr27:23632886-23632350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 12
               

               
Conread position:
               
70-586
               

               
Cow position:
               
chr27:24477690-24477174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 19
               

               
Conread position:
               
70-586
               

               
Cow position:
               
chr27:25809233-25809770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 16
               

               
Conread position:
               
70-586
               

               
Cow position:
               
chr27:31230805-31231332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 19
               

               
Conread position:
               
70-587
               

               
Cow position:
               
chr27:7212432-7212985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 19
               

               
Conread position:
               
70-587
               

               
Cow position:
               
chr27:13876018-13875475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
70-587
               

               
Cow position:
               
chr27:14670091-14670633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 22
               

               
Conread position:
               
70-587
               

               
Cow position:
               
chr27:15866511-15865964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 19
               

               
Conread position:
               
70-587
               

               
Cow position:
               
chr27:20869397-20869935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
71-258
               

               
Cow position:
               
chr27:15349513-15349716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
32, 18
               

               
Conread position:
               
71-258
               

               
Cow position:
               
chr27:24938034-24938229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
49, 21
               

               
Conread position:
               
71-286
               

               
Cow position:
               
chr27:9978115-9977888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
44, 18
               

               
Conread position:
               
71-315
               

               
Cow position:
               
chr27:23452763-23452513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
36, 72
               

               
Conread position:
               
71-370
               

               
Cow position:
               
chr27:4829525-4829824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
44, 17
               

               
Conread position:
               
71-445
               

               
Cow position:
               
chr27:24999447-24999852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
39, 18
               

               
Conread position:
               
71-504
               

               
Cow position:
               
chr27:4819421-4819884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
44, 21
               

               
Conread position:
               
71-505
               

               
Cow position:
               
chr27:27136245-27136692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 21
               

               
Conread position:
               
71-507
               

               
Cow position:
               
chr27:30561205-30560753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
44, 18
               

               
Conread position:
               
71-508
               

               
Cow position:
               
chr27:29208085-29207633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
44, 18
               

               
Conread position:
               
71-577
               

               
Cow position:
               
chr27:15867676-15867148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 18
               

               
Conread position:
               
71-586
               

               
Cow position:
               
chr27:15454502-15453957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 21
               

               
Conread position:
               
72-347
               

               
Cow position:
               
chr27:4664760-4664480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
72-435
               

               
Cow position:
               
chr27:21350727-21351123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 19
               

               
Conread position:
               
72-514
               

               
Cow position:
               
chr27:26300123-26299661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
72-581
               

               
Cow position:
               
chr27:28189929-28190440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
72-584
               

               
Cow position:
               
chr27:28018622-28018071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
73-341
               

               
Cow position:
               
chr27:12502843-12503128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 16
               

               
Conread position:
               
73-393
               

               
Cow position:
               
chr27:13409881-13410219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
42, 16
               

               
Conread position:
               
74-243
               

               
Cow position:
               
chr27:2557098-2556917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
42, 15
               

               
Conread position:
               
74-340
               

               
Cow position:
               
chr27:221771-222056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-341
               

               
Cow position:
               
chr27:724429-724715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-341
               

               
Cow position:
               
chr27:1030669-1030386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
74-341
               

               
Cow position:
               
chr27:9045947-9045664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
74-341
               

               
Cow position:
               
chr27:11417606-11417892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
74-341
               

               
Cow position:
               
chr27:14298074-14298359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-341
               

               
Cow position:
               
chr27:20749755-20750036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
74-341
               

               
Cow position:
               
chr27:26787078-26787359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
74-348
               

               
Cow position:
               
chr27:26397984-26398260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
59, 18
               

               
Conread position:
               
74-355
               

               
Cow position:
               
chr27:22394455-22394153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-356
               

               
Cow position:
               
chr27:2332382-2332682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-362
               

               
Cow position:
               
chr27:12147777-12148084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-362
               

               
Cow position:
               
chr27:30684194-30683887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-369
               

               
Cow position:
               
chr27:2001729-2002042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
74-369
               

               
Cow position:
               
chr27:13422279-13421966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
74-370
               

               
Cow position:
               
chr27:18811973-18811658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-376
               

               
Cow position:
               
chr27:3690759-3690437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-377
               

               
Cow position:
               
chr27:523906-524229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-377
               

               
Cow position:
               
chr27:1654984-1655307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-377
               

               
Cow position:
               
chr27:2590007-2589686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-377
               

               
Cow position:
               
chr27:3650367-3650690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-377
               

               
Cow position:
               
chr27:4769200-4769522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
74-377
               

               
Cow position:
               
chr27:10590389-10590712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-377
               

               
Cow position:
               
chr27:11651365-11651042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
74-377
               

               
Cow position:
               
chr27:12016626-12016305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
74-377
               

               
Cow position:
               
chr27:17403182-17402859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-377
               

               
Cow position:
               
chr27:19325786-19325463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-377
               

               
Cow position:
               
chr27:22796774-22796452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-377
               

               
Cow position:
               
chr27:26341335-26341658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-377
               

               
Cow position:
               
chr27:26584590-26584269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-377
               

               
Cow position:
               
chr27:29035497-29035174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
74-377
               

               
Cow position:
               
chr27:30014789-30015112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-377
               

               
Cow position:
               
chr27:30306392-30306069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
74-377
               

               
Cow position:
               
chr27:30361492-30361169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-378
               

               
Cow position:
               
chr27:30177282-30177609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
74-392
               

               
Cow position:
               
chr27:12501999-12502337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-392
               

               
Cow position:
               
chr27:23079971-23080309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-399
               

               
Cow position:
               
chr27:526794-527139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
74-400
               

               
Cow position:
               
chr27:8187707-8188053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-400
               

               
Cow position:
               
chr27:15100524-15100870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-400
               

               
Cow position:
               
chr27:16045615-16045956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
36, 15
               

               
Conread position:
               
74-401
               

               
Cow position:
               
chr27:32677-33030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-401
               

               
Cow position:
               
chr27:66942-67287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 18
               

               
Conread position:
               
74-401
               

               
Cow position:
               
chr27:732849-732508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-401
               

               
Cow position:
               
chr27:26463600-26463949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-401
               

               
Cow position:
               
chr27:29374021-29373668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-406
               

               
Cow position:
               
chr27:651671-652028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-406
               

               
Cow position:
               
chr27:2429949-2430300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
41, 18
               

               
Conread position:
               
74-406
               

               
Cow position:
               
chr27:8743218-8742861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-406
               

               
Cow position:
               
chr27:27630455-27630812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-406
               

               
Cow position:
               
chr27:28982619-28982975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
41, 18
               

               
Conread position:
               
74-414
               

               
Cow position:
               
chr27:5881413-5881771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-414
               

               
Cow position:
               
chr27:12005796-12005437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-414
               

               
Cow position:
               
chr27:31566298-31566657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-419
               

               
Cow position:
               
chr27:30271437-30271073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-421
               

               
Cow position:
               
chr27:11606001-11605641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
74-421
               

               
Cow position:
               
chr27:12007033-12007399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-421
               

               
Cow position:
               
chr27:19487099-19486733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-421
               

               
Cow position:
               
chr27:24241234-24240868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-446
               

               
Cow position:
               
chr27:12277992-12278365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
41, 18
               

               
Conread position:
               
74-500
               

               
Cow position:
               
chr27:25411229-25411675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-502
               

               
Cow position:
               
chr27:19718202-19717746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 18
               

               
Conread position:
               
74-503
               

               
Cow position:
               
chr27:27038554-27039007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 18
               

               
Conread position:
               
74-504
               

               
Cow position:
               
chr27:23882079-23882538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 15
               

               
Conread position:
               
74-508
               

               
Cow position:
               
chr27:4385779-4386236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-575
               

               
Cow position:
               
chr27:26999139-26999666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 18
               

               
Conread position:
               
74-577
               

               
Cow position:
               
chr27:28931503-28932047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
74-578
               

               
Cow position:
               
chr27:26984625-26984108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
74-580
               

               
Cow position:
               
chr27:24445870-24446385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-581
               

               
Cow position:
               
chr27:26856925-26857425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
74-583
               

               
Cow position:
               
chr27:27606058-27606545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 19
               

               
Conread position:
               
75-362
               

               
Cow position:
               
chr27:30856117-30856399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
75, 17
               

               
Conread position:
               
77-257
               

               
Cow position:
               
chr27:13977107-13977304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
77-341
               

               
Cow position:
               
chr27:27809783-27810066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
77-396
               

               
Cow position:
               
chr27:30702804-30703124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
77-401
               

               
Cow position:
               
chr27:30362526-30362181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
43, 14
               

               
Conread position:
               
77-489
               

               
Cow position:
               
chr27:20641060-20641489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
38, 14
               

               
Conread position:
               
77-493
               

               
Cow position:
               
chr27:536736-536305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
77-509
               

               
Cow position:
               
chr27:8942409-8942864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 12
               

               
Conread position:
               
77-509
               

               
Cow position:
               
chr27:27683831-27684286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
39, 12
               

               
Conread position:
               
77-569
               

               
Cow position:
               
chr27:21977854-21978380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 12
               

               
Conread position:
               
77-579
               

               
Cow position:
               
chr27:8629591-8630120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 15
               

               
Conread position:
               
77-580
               

               
Cow position:
               
chr27:26424306-26424824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
77-581
               

               
Cow position:
               
chr27:22171581-22171053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
77-583
               

               
Cow position:
               
chr27:26427845-26428378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 12
               

               
Conread position:
               
77-584
               

               
Cow position:
               
chr27:7971853-7971308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
43, 12
               

               
Conread position:
               
77-585
               

               
Cow position:
               
chr27:8961986-8962493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 14
               

               
Conread position:
               
77-588
               

               
Cow position:
               
chr27:29799225-29798695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
59, 9
               

               
Conread position:
               
78-256
               

               
Cow position:
               
chr27:28146367-28146554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
37, 11
               

               
Conread position:
               
78-306
               

               
Cow position:
               
chr27:6674517-6674277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
78-341
               

               
Cow position:
               
chr27:22255169-22254885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 14
               

               
Conread position:
               
78-351
               

               
Cow position:
               
chr27:23576257-23576544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
36, 14
               

               
Conread position:
               
78-490
               

               
Cow position:
               
chr27:12246928-12246497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
98, 11
               

               
Conread position:
               
78-509
               

               
Cow position:
               
chr27:22723431-22723870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 11
               

               
Conread position:
               
78-561
               

               
Cow position:
               
chr27:16960478-16959969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
42, 11
               

               
Conread position:
               
78-581
               

               
Cow position:
               
chr27:23128736-23128216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
78-583
               

               
Cow position:
               
chr27:30868458-30869001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 13
               

               
Conread position:
               
78-585
               

               
Cow position:
               
chr27:8062080-8062603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 14
               

               
Conread position:
               
79-514
               

               
Cow position:
               
chr27:15319732-15319279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
38, 10
               

               
Conread position:
               
80-576
               

               
Cow position:
               
chr27:22549502-22550014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
80-576
               

               
Cow position:
               
chr27:26864853-26865352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 9
               

               
Conread position:
               
80-581
               

               
Cow position:
               
chr27:2957685-2957168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 257
               

               
Conread position:
               
80-585
               

               
Cow position:
               
chr27:16513602-16514100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
81-381
               

               
Cow position:
               
chr27:13198185-13197885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
34, 5
               

               
Conread position:
               
82-258
               

               
Cow position:
               
chr27:4330859-4330681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
93, 7
               

               
Conread position:
               
82-259
               

               
Cow position:
               
chr27:23511397-23511211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
33, 7
               

               
Conread position:
               
82-341
               

               
Cow position:
               
chr27:2900087-2899818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
29, 7
               

               
Conread position:
               
82-351
               

               
Cow position:
               
chr27:10384324-10384613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 7
               

               
Conread position:
               
82-530
               

               
Cow position:
               
chr27:22418489-22418962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 7
               

               
Conread position:
               
84-414
               

               
Cow position:
               
chr27:773430-773080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
31, 338
               

               
Conread position:
               
84-522
               

               
Cow position:
               
chr27:26959346-26959804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 144
               

               
Conread position:
               
87-325
               

               
Cow position:
               
chr27:14530570-14530828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
28, 172
               

               
Conread position:
               
87-339
               

               
Cow position:
               
chr27:5990156-5989888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
87-341
               

               
Cow position:
               
chr27:20811313-20811582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
28, 163
               

               
Conread position:
               
87-414
               

               
Cow position:
               
chr27:8932538-8932191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
28, 335
               

               
Conread position:
               
87-543
               

               
Cow position:
               
chr27:21408274-21408777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
28, 417
               

               
Conread position:
               
87-577
               

               
Cow position:
               
chr27:6541890-6541390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 21
               

               
Conread position:
               
88-490
               

               
Cow position:
               
chr27:21139098-21138674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
27, 12
               

               
Conread position:
               
88-494
               

               
Cow position:
               
chr27:23472523-23472099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 31
               

               
Conread position:
               
88-567
               

               
Cow position:
               
chr27:19589748-19589248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
27, 58
               

               
Conread position:
               
88-570
               

               
Cow position:
               
chr27:2900968-2901503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
27, 424
               

               
Conread position:
               
88-586
               

               
Cow position:
               
chr27:19388290-19387767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 483
               

               
Conread position:
               
89-377
               

               
Cow position:
               
chr27:19552156-19552465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
89-444
               

               
Cow position:
               
chr27:12429684-12429296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
31, 264
               

               
Conread position:
               
89-570
               

               
Cow position:
               
chr27:21668853-21669350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 35
               

               
Conread position:
               
90-581
               

               
Cow position:
               
chr27:11422557-11423082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
30, 207
               

               
Conread position:
               
91-570
               

               
Cow position:
               
chr27:30406761-30407285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 419
               

               
Conread position:
               
92-341
               

               
Cow position:
               
chr27:14907000-14906732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
92-569
               

               
Cow position:
               
chr27:31372711-31373209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 180
               

               
Conread position:
               
93-305
               

               
Cow position:
               
chr27:2643670-2643885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
22, 143
               

               
Conread position:
               
93-577
               

               
Cow position:
               
chr27:7412651-7412148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 236
               

               
Conread position:
               
94-578
               

               
Cow position:
               
chr27:27204168-27204683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
74, 118
               

               
Conread position:
               
95-377
               

               
Cow position:
               
chr27:27699759-27700062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
100-493
               

               
Cow position:
               
chr27:11273828-11273418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
15, 140
               

               
Conread position:
               
106-259
               

               
Cow position:
               
chr27:27455210-27455369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
106-341
               

               
Cow position:
               
chr27:27622766-27623013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
66, 29
               

               
Conread position:
               
112-586
               

               
Cow position:
               
chr27:28921652-28922149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 179
               

               
Conread position:
               
117-347
               

               
Cow position:
               
chr27:25471382-25471140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 192
               

               
Conread position:
               
118-258
               

               
Cow position:
               
chr27:22293477-22293619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
58, 24
               

               
Conread position:
               
118-564
               

               
Cow position:
               
chr27:11815524-11815979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 27
               

               
Conread position:
               
118-578
               

               
Cow position:
               
chr27:27388793-27389273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 24
               

               
Conread position:
               
119-275
               

               
Cow position:
               
chr27:24009703-24009863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
59, 92
               

               
Conread position:
               
120-342
               

               
Cow position:
               
chr27:11762504-11762730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 136
               

               
Conread position:
               
120-406
               

               
Cow position:
               
chr27:27259843-27259544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
49, 225
               

               
Conread position:
               
120-429
               

               
Cow position:
               
chr27:20765728-20766052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
55, 122
               

               
Conread position:
               
120-575
               

               
Cow position:
               
chr27:30765267-30764789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 121
               

               
Conread position:
               
120-576
               

               
Cow position:
               
chr27:4390019-4390501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
45, 169
               

               
Conread position:
               
120-581
               

               
Cow position:
               
chr27:1353816-1353332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 22
               

               
Conread position:
               
120-581
               

               
Cow position:
               
chr27:13638757-13639236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 190
               

               
Conread position:
               
120-584
               

               
Cow position:
               
chr27:8430204-8430672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
44, 157
               

               
Conread position:
               
120-586
               

               
Cow position:
               
chr27:10307060-10307557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 138
               

               
Conread position:
               
122-417
               

               
Cow position:
               
chr27:26935684-26935977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
9, 152
               

               
Conread position:
               
123-490
               

               
Cow position:
               
chr27:26440825-26441204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
123-570
               

               
Cow position:
               
chr27:15203998-15204474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
10, 126
               

               
Conread position:
               
123-570
               

               
Cow position:
               
chr27:18507865-18507407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 149
               

               
Conread position:
               
123-576
               

               
Cow position:
               
chr27:6550684-6550216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 132
               

               
Conread position:
               
123-580
               

               
Cow position:
               
chr27:10980097-10979612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 188
               

               
Conread position:
               
123-584
               

               
Cow position:
               
chr27:13411127-13411620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 10
               

               
Conread position:
               
126-320
               

               
Cow position:
               
chr27:2011872-2012078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
10, 115
               

               
Conread position:
               
126-323
               

               
Cow position:
               
chr27:6058731-6058520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
126-324
               

               
Cow position:
               
chr27:21418837-21419047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
126-368
               

               
Cow position:
               
chr27:15200928-15200680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
16, 180
               

               
Conread position:
               
126-577
               

               
Cow position:
               
chr27:7851601-7851144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
61, 105
               

               
Conread position:
               
127-351
               

               
Cow position:
               
chr27:12240812-12241039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
42, 157
               

               
Conread position:
               
127-505
               

               
Cow position:
               
chr27:27640764-27641182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
42, 346
               

               
Conread position:
               
128-508
               

               
Cow position:
               
chr27:23483450-23483051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 103
               

               
Conread position:
               
128-586
               

               
Cow position:
               
chr27:13006059-13005613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
40, 100
               

               
Conread position:
               
129-340
               

               
Cow position:
               
chr27:22498779-22498563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
47, 110
               

               
Conread position:
               
129-401
               

               
Cow position:
               
chr27:26379951-26380237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
41, 28
               

               
Conread position:
               
129-470
               

               
Cow position:
               
chr27:4812651-4813020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
129-489
               

               
Cow position:
               
chr27:4835380-4835763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 208
               

               
Conread position:
               
129-503
               

               
Cow position:
               
chr27:29019520-29019902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
35, 182
               

               
Conread position:
               
129-509
               

               
Cow position:
               
chr27:24738576-24738973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
129-570
               

               
Cow position:
               
chr27:27632383-27632831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 173
               

               
Conread position:
               
130-409
               

               
Cow position:
               
chr27:30527391-30527108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
34, 132
               

               
Conread position:
               
130-490
               

               
Cow position:
               
chr27:8048514-8048888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
46, 61
               

               
Conread position:
               
130-577
               

               
Cow position:
               
chr27:2592766-2592292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 91
               

               
Conread position:
               
132-307
               

               
Cow position:
               
chr27:26625350-26625164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
21, 129
               

               
Conread position:
               
132-417
               

               
Cow position:
               
chr27:2682921-2683226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
47, 7
               

               
Conread position:
               
132-443
               

               
Cow position:
               
chr27:11081419-11081091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
44, 54
               

               
Conread position:
               
132-578
               

               
Cow position:
               
chr27:22220777-22220304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 146
               

               
Conread position:
               
134-332
               

               
Cow position:
               
chr27:29515641-29515840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
30, 74
               

               
Conread position:
               
135-326
               

               
Cow position:
               
chr27:12263807-12263609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
41, 172
               

               
Conread position:
               
135-351
               

               
Cow position:
               
chr27:1183656-1183882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
41, 72
               

               
Conread position:
               
135-377
               

               
Cow position:
               
chr27:668042-668299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
135-377
               

               
Cow position:
               
chr27:3638604-3638861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
135-377
               

               
Cow position:
               
chr27:29198325-29198582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
135-418
               

               
Cow position:
               
chr27:13837536-13837239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
39, 281
               

               
Conread position:
               
135-484
               

               
Cow position:
               
chr27:18593487-18593122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 5
               

               
Conread position:
               
135-509
               

               
Cow position:
               
chr27:20796004-20795617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 86
               

               
Conread position:
               
135-519
               

               
Cow position:
               
chr27:26218915-26218522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
135-563
               

               
Cow position:
               
chr27:23554103-23554560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 325
               

               
Conread position:
               
135-570
               

               
Cow position:
               
chr27:29493697-29494136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 113
               

               
Conread position:
               
135-577
               

               
Cow position:
               
chr27:6500285-6499813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 228
               

               
Conread position:
               
135-581
               

               
Cow position:
               
chr27:2930376-2930840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
41, 243
               

               
Conread position:
               
135-582
               

               
Cow position:
               
chr27:26508941-26509405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 252
               

               
Conread position:
               
135-586
               

               
Cow position:
               
chr27:23930184-23929722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
41, 26
               

               
Conread position:
               
136-342
               

               
Cow position:
               
chr27:795001-794793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 163
               

               
Conread position:
               
136-358
               

               
Cow position:
               
chr27:19577893-19577661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
44, 33
               

               
Conread position:
               
136-375
               

               
Cow position:
               
chr27:31216944-31217194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
40, 193
               

               
Conread position:
               
136-401
               

               
Cow position:
               
chr27:14902430-14902718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
136-410
               

               
Cow position:
               
chr27:6523265-6522970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
136-475
               

               
Cow position:
               
chr27:1058461-1058817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
39, 25
               

               
Conread position:
               
136-481
               

               
Cow position:
               
chr27:4104-3758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
27, 179
               

               
Conread position:
               
136-501
               

               
Cow position:
               
chr27:20553936-20553563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 123
               

               
Conread position:
               
136-563
               

               
Cow position:
               
chr27:19661162-19660697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 83
               

               
Conread position:
               
136-580
               

               
Cow position:
               
chr27:22179578-22180013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 127
               

               
Conread position:
               
136-581
               

               
Cow position:
               
chr27:19543690-19544150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
40, 103
               

               
Conread position:
               
136-585
               

               
Cow position:
               
chr27:30374351-30374836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
35, 186
               

               
Conread position:
               
137-348
               

               
Cow position:
               
chr27:25791022-25790801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
137-414
               

               
Cow position:
               
chr27:21569626-21569918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
137-566
               

               
Cow position:
               
chr27:18558582-18558124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 302
               

               
Conread position:
               
138-351
               

               
Cow position:
               
chr27:25998922-25998698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 168
               

               
Conread position:
               
138-451
               

               
Cow position:
               
chr27:707164-706835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
31, 79
               

               
Conread position:
               
138-484
               

               
Cow position:
               
chr27:24321405-24321039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 324
               

               
Conread position:
               
138-576
               

               
Cow position:
               
chr27:29038723-29039165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
38, 114
               

               
Conread position:
               
138-586
               

               
Cow position:
               
chr27:17473030-17472560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 299
               

               
Conread position:
               
139-317
               

               
Cow position:
               
chr27:21452854-21453049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
139-541
               

               
Cow position:
               
chr27:20481184-20481565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 37
               

               
Conread position:
               
140-347
               

               
Cow position:
               
chr27:22771973-22771750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
140-348
               

               
Cow position:
               
chr27:31147458-31147672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
31, 169
               

               
Conread position:
               
140-351
               

               
Cow position:
               
chr27:27528146-27528358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
36, 168
               

               
Conread position:
               
140-464
               

               
Cow position:
               
chr27:30551211-30550859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 101
               

               
Conread position:
               
140-477
               

               
Cow position:
               
chr27:27843777-27844146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
36, 157
               

               
Conread position:
               
140-480
               

               
Cow position:
               
chr27:24014526-24014886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 183
               

               
Conread position:
               
140-504
               

               
Cow position:
               
chr27:25783817-25783455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 151
               

               
Conread position:
               
140-518
               

               
Cow position:
               
chr27:30354130-30354524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 366
               

               
Conread position:
               
140-576
               

               
Cow position:
               
chr27:12516414-12515950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 213
               

               
Conread position:
               
140-578
               

               
Cow position:
               
chr27:26643888-26643457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 75
               

               
Conread position:
               
140-585
               

               
Cow position:
               
chr27:7934948-7935408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 114
               

               
Conread position:
               
140-586
               

               
Cow position:
               
chr27:30890502-30890047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 57
               

               
Conread position:
               
141-341
               

               
Cow position:
               
chr27:22518842-22518638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
28, 82
               

               
Conread position:
               
141-566
               

               
Cow position:
               
chr27:24331940-24331480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 278
               

               
Conread position:
               
141-579
               

               
Cow position:
               
chr27:23917843-23918281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 58
               

               
Conread position:
               
141-585
               

               
Cow position:
               
chr27:15668553-15669027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 28
               

               
Conread position:
               
141-586
               

               
Cow position:
               
chr27:31219455-31219019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 96
               

               
Conread position:
               
142-290
               

               
Cow position:
               
chr27:26406830-26406987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
29, 152
               

               
Conread position:
               
142-298
               

               
Cow position:
               
chr27:17926424-17926584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
27, 116
               

               
Conread position:
               
142-369
               

               
Cow position:
               
chr27:16871706-16871939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 108
               

               
Conread position:
               
142-508
               

               
Cow position:
               
chr27:22454565-22454951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 100
               

               
Conread position:
               
142-554
               

               
Cow position:
               
chr27:28164198-28164613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
31, 62
               

               
Conread position:
               
142-558
               

               
Cow position:
               
chr27:26239237-26238798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 346
               

               
Conread position:
               
142-570
               

               
Cow position:
               
chr27:12596969-12596544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 63
               

               
Conread position:
               
142-581
               

               
Cow position:
               
chr27:26163591-26163155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
34, 57
               

               
Conread position:
               
143-544
               

               
Cow position:
               
chr27:30605895-30605485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
33, 167
               

               
Conread position:
               
144-351
               

               
Cow position:
               
chr27:28038126-28038346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
144-504
               

               
Cow position:
               
chr27:30359606-30359236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 53
               

               
Conread position:
               
145-285
               

               
Cow position:
               
chr27:13847849-13847700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
145-586
               

               
Cow position:
               
chr27:16284682-16284233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 24
               

               
Conread position:
               
146-588
               

               
Cow position:
               
chr27:16478139-16478577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 82
               

               
Conread position:
               
147-347
               

               
Cow position:
               
chr27:29283203-29283410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
18, 5
               

               
Conread position:
               
148-481
               

               
Cow position:
               
chr27:1498521-1498167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 70
               

               
Conread position:
               
148-507
               

               
Cow position:
               
chr27:25277342-25276970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
21, 7
               

               
Conread position:
               
148-579
               

               
Cow position:
               
chr27:27856539-27856092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 192
               

               
Conread position:
               
149-325
               

               
Cow position:
               
chr27:1884244-1884062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
27, 158
               

               
Conread position:
               
149-400
               

               
Cow position:
               
chr27:18215262-18214997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
27, 174
               

               
Conread position:
               
149-434
               

               
Cow position:
               
chr27:27728519-27728224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
27, 85
               

               
Conread position:
               
149-490
               

               
Cow position:
               
chr27:19647738-19648099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
26, 79
               

               
Conread position:
               
149-586
               

               
Cow position:
               
chr27:30915207-30914751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 8
               

               
Conread position:
               
150-561
               

               
Cow position:
               
chr27:19685509-19685939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 92
               

               
Conread position:
               
151-570
               

               
Cow position:
               
chr27:19546300-19546759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
24, 67
               

               
Conread position:
               
152-340
               

               
Cow position:
               
chr27:27055781-27055580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
152-351
               

               
Cow position:
               
chr27:29251083-29250873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
16, 175
               

               
Conread position:
               
152-578
               

               
Cow position:
               
chr27:27245149-27245608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 242
               

               
Conread position:
               
152-582
               

               
Cow position:
               
chr27:20354783-20354350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 76
               

               
Conread position:
               
153-569
               

               
Cow position:
               
chr27:27003079-27003495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
22, 77
               

               
Conread position:
               
155-469
               

               
Cow position:
               
chr27:29905798-29905479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 25
               

               
Conread position:
               
156-329
               

               
Cow position:
               
chr27:18030860-18031046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
157-576
               

               
Cow position:
               
chr27:28001620-28002047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 41
               

               
Conread position:
               
157-578
               

               
Cow position:
               
chr27:22330472-22330905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
19, 12
               

               
Conread position:
               
158-581
               

               
Cow position:
               
chr27:13841569-13841114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
29, 127
               

               
Conread position:
               
160-586
               

               
Cow position:
               
chr27:13252200-13251778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 188
               

               
Conread position:
               
161-579
               

               
Cow position:
               
chr27:22547214-22547635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 285
               

               
Conread position:
               
163-482
               

               
Cow position:
               
chr27:26151208-26150869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
13, 81
               

               
Conread position:
               
163-561
               

               
Cow position:
               
chr27:18739576-18739145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
10, 334
               

               
Conread position:
               
164-509
               

               
Cow position:
               
chr27:30988984-30988622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
23, 94
               

               
Conread position:
               
165-369
               

               
Cow position:
               
chr27:28061579-28061784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
22, 157
               

               
Conread position:
               
165-377
               

               
Cow position:
               
chr27:910899-911115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 83
               

               
Conread position:
               
165-393
               

               
Cow position:
               
chr27:31499253-31499013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
22, 66
               

               
Conread position:
               
166-397
               

               
Cow position:
               
chr27:26885070-26885300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 11
               

               
Conread position:
               
169-320
               

               
Cow position:
               
chr27:28008876-28009035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
16, 25
               

               
Conread position:
               
170-351
               

               
Cow position:
               
chr27:30670918-30670737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 82
               

               
Conread position:
               
170-370
               

               
Cow position:
               
chr27:20592164-20591959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
17, 185
               

               
Conread position:
               
170-452
               

               
Cow position:
               
chr27:11296438-11296151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
17, 78
               

               
Conread position:
               
170-504
               

               
Cow position:
               
chr27:20036948-20037286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
17, 67
               

               
Conread position:
               
170-588
               

               
Cow position:
               
chr27:10992534-10992119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
17, 141
               

               
Conread position:
               
174-400
               

               
Cow position:
               
chr27:27550571-27550798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
13, 105
               

               
Conread position:
               
176-464
               

               
Cow position:
               
chr27:9169470-9169770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
12, 245
               

               
Conread position:
               
177-576
               

               
Cow position:
               
chr27:19668617-19669049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
63, 12
               

               
Conread position:
               
178-581
               

               
Cow position:
               
chr27:26426381-26425974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
9, 154
               

               
Conread position:
               
182-586
               

               
Cow position:
               
chr27:27438337-27438762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
183-580
               

               
Cow position:
               
chr27:4944362-4944754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 65
               

               
Conread position:
               
185-486
               

               
Cow position:
               
chr27:21213929-21213635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
79, 29
               

               
Conread position:
               
185-576
               

               
Cow position:
               
chr27:28496210-28496614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 189
               

               
Conread position:
               
186-313
               

               
Cow position:
               
chr27:26322517-26322384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
49, 128
               

               
Conread position:
               
186-351
               

               
Cow position:
               
chr27:18434307-18434475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
29, 129
               

               
Conread position:
               
186-351
               

               
Cow position:
               
chr27:22268668-22268496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
186-462
               

               
Cow position:
               
chr27:23662441-23662721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
49, 98
               

               
Conread position:
               
186-567
               

               
Cow position:
               
chr27:15408880-15409260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 108
               

               
Conread position:
               
186-567
               

               
Cow position:
               
chr27:16705410-16705018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 126
               

               
Conread position:
               
186-577
               

               
Cow position:
               
chr27:20748862-20749247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
163, 32
               

               
Conread position:
               
186-586
               

               
Cow position:
               
chr27:29184679-29185099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
75, 23
               

               
Conread position:
               
187-570
               

               
Cow position:
               
chr27:20046040-20045658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
74, 40
               

               
Conread position:
               
187-581
               

               
Cow position:
               
chr27:30871897-30872306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 136
               

               
Conread position:
               
188-509
               

               
Cow position:
               
chr27:15643337-15642999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 266
               

               
Conread position:
               
188-572
               

               
Cow position:
               
chr27:27613477-27613838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
77, 119
               

               
Conread position:
               
188-584
               

               
Cow position:
               
chr27:7346822-7346419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 47
               

               
Conread position:
               
188-584
               

               
Cow position:
               
chr27:19896918-19896508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
47, 92
               

               
Conread position:
               
188-585
               

               
Cow position:
               
chr27:29431622-29431222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 117
               

               
Conread position:
               
189-570
               

               
Cow position:
               
chr27:3306936-3306548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
12, 209
               

               
Conread position:
               
190-575
               

               
Cow position:
               
chr27:11480470-11480881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 349
               

               
Conread position:
               
190-581
               

               
Cow position:
               
chr27:16781024-16780611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 58
               

               
Conread position:
               
191-341
               

               
Cow position:
               
chr27:14435704-14435546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
191-475
               

               
Cow position:
               
chr27:11562983-11563280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
49, 214
               

               
Conread position:
               
191-576
               

               
Cow position:
               
chr27:19497033-19496635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
66, 150
               

               
Conread position:
               
192-507
               

               
Cow position:
               
chr27:22423652-22423343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
158, 32
               

               
Conread position:
               
192-587
               

               
Cow position:
               
chr27:14343310-14343690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 28
               

               
Conread position:
               
193-408
               

               
Cow position:
               
chr27:154525-154291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
194-559
               

               
Cow position:
               
chr27:23891093-23890706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 43
               

               
Conread position:
               
195-330
               

               
Cow position:
               
chr27:13375877-13376013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
66, 39
               

               
Conread position:
               
195-563
               

               
Cow position:
               
chr27:22735447-22735825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
45, 86
               

               
Conread position:
               
195-581
               

               
Cow position:
               
chr27:22513520-22513930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
54, 115
               

               
Conread position:
               
196-493
               

               
Cow position:
               
chr27:20549560-20549871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
72, 28
               

               
Conread position:
               
196-571
               

               
Cow position:
               
chr27:7731095-7731513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
197-495
               

               
Cow position:
               
chr27:28270994-28271312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
198-583
               

               
Cow position:
               
chr27:427124-426719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
199-582
               

               
Cow position:
               
chr27:23545178-23545588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
66, 28
               

               
Conread position:
               
200-563
               

               
Cow position:
               
chr27:26489752-26490136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
41, 287
               

               
Conread position:
               
200-587
               

               
Cow position:
               
chr27:7649433-7649845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
21, 116
               

               
Conread position:
               
201-478
               

               
Cow position:
               
chr27:715652-715357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 198
               

               
Conread position:
               
202-490
               

               
Cow position:
               
chr27:29312522-29312831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
39, 81
               

               
Conread position:
               
203-393
               

               
Cow position:
               
chr27:4011820-4011622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
58, 15
               

               
Conread position:
               
206-566
               

               
Cow position:
               
chr27:26481074-26481431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
48, 19
               

               
Conread position:
               
207-509
               

               
Cow position:
               
chr27:16589570-16589878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 124
               

               
Conread position:
               
208-575
               

               
Cow position:
               
chr27:17331644-17331249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 271
               

               
Conread position:
               
209-341
               

               
Cow position:
               
chr27:26131677-26131813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
209-434
               

               
Cow position:
               
chr27:20789239-20789480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
52, 27
               

               
Conread position:
               
214-586
               

               
Cow position:
               
chr27:19500097-19500490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
27, 270
               

               
Conread position:
               
216-566
               

               
Cow position:
               
chr27:4858515-4858853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
45, 17
               

               
Conread position:
               
218-578
               

               
Cow position:
               
chr27:16103935-16103565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 48
               

               
Conread position:
               
222-586
               

               
Cow position:
               
chr27:8168302-8168673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
39, 259
               

               
Conread position:
               
225-504
               

               
Cow position:
               
chr27:22569898-22569614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 98
               

               
Conread position:
               
226-584
               

               
Cow position:
               
chr27:27442047-27442411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
35, 234
               

               
Conread position:
               
228-576
               

               
Cow position:
               
chr27:7614967-7615313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
29, 194
               

               
Conread position:
               
236-504
               

               
Cow position:
               
chr27:24371348-24371072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 74
               

               
Conread position:
               
237-488
               

               
Cow position:
               
chr27:28245913-28245648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
237-586
               

               
Cow position:
               
chr27:26226178-26226541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 67
               

               
Conread position:
               
238-510
               

               
Cow position:
               
chr27:31148871-31148585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
17, 251
               

               
Conread position:
               
239-561
               

               
Cow position:
               
chr27:27694662-27695004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 241
               

               
Conread position:
               
240-464
               

               
Cow position:
               
chr27:16626006-16625769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
240-586
               

               
Cow position:
               
chr27:29380967-29380606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
15, 234
               

               
Conread position:
               
242-570
               

               
Cow position:
               
chr27:18646040-18646387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
23, 246
               

               
Conread position:
               
243-585
               

               
Cow position:
               
chr27:23594422-23594067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 85
               

               
Conread position:
               
243-586
               

               
Cow position:
               
chr27:12191383-12191737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
18, 109
               

               
Conread position:
               
245-570
               

               
Cow position:
               
chr27:22386974-22386650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
16, 241
               

               
Conread position:
               
245-586
               

               
Cow position:
               
chr27:29504543-29504883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
17, 42
               

               
Conread position:
               
257-465
               

               
Cow position:
               
chr27:21976139-21975922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 84
               

               
Conread position:
               
264-485
               

               
Cow position:
               
chr27:20092756-20092986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
71, 40
               

               
Conread position:
               
264-490
               

               
Cow position:
               
chr27:673962-674187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
17, 87
               

               
Conread position:
               
264-504
               

               
Cow position:
               
chr27:26407082-26407330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
264-562
               

               
Cow position:
               
chr27:26188904-26188597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
14, 80
               

               
Conread position:
               
264-579
               

               
Cow position:
               
chr27:23511072-23510728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
264-581
               

               
Cow position:
               
chr27:15378396-15378730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
89, 61
               

               
Conread position:
               
264-583
               

               
Cow position:
               
chr27:26087376-26087070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
265-497
               

               
Cow position:
               
chr27:25720863-25721112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
89, 17
               

               
Conread position:
               
266-581
               

               
Cow position:
               
chr27:28896954-28896629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
84, 13
               

               
Conread position:
               
268-581
               

               
Cow position:
               
chr27:6925167-6924833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
82, 146
               

               
Conread position:
               
268-581
               

               
Cow position:
               
chr27:24440150-24440466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
79, 25
               

               
Conread position:
               
272-509
               

               
Cow position:
               
chr27:23748486-23748720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
53, 126
               

               
Conread position:
               
277-494
               

               
Cow position:
               
chr27:31017765-31017986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
73, 58
               

               
Conread position:
               
279-569
               

               
Cow position:
               
chr27:23452526-23452226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 136
               

               
Conread position:
               
280-514
               

               
Cow position:
               
chr27:22225529-22225772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
75, 194
               

               
Conread position:
               
280-584
               

               
Cow position:
               
chr27:16965639-16965323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
83, 118
               

               
Conread position:
               
280-584
               

               
Cow position:
               
chr27:20514887-20514573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
72, 145
               

               
Conread position:
               
280-584
               

               
Cow position:
               
chr27:26111843-26112170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
283-524
               

               
Cow position:
               
chr27:28260476-28260726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
67, 42
               

               
Conread position:
               
284-464
               

               
Cow position:
               
chr27:8405763-8405953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
284-530
               

               
Cow position:
               
chr27:26506787-26506545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
218, 41
               

               
Conread position:
               
284-584
               

               
Cow position:
               
chr27:23559969-23560281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 25
               

               
Conread position:
               
284-585
               

               
Cow position:
               
chr27:23485276-23484962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 205
               

               
Conread position:
               
284-586
               

               
Cow position:
               
chr27:29164827-29164519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
47, 42
               

               
Conread position:
               
288-570
               

               
Cow position:
               
chr27:24240404-24240114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
111, 37
               

               
Conread position:
               
289-576
               

               
Cow position:
               
chr27:31151434-31151140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
42, 212
               

               
Conread position:
               
293-580
               

               
Cow position:
               
chr27:68256-67989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
293-586
               

               
Cow position:
               
chr27:29693520-29693212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
121, 61
               

               
Conread position:
               
294-586
               

               
Cow position:
               
chr27:23860221-23859905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
18, 118
               

               
Conread position:
               
296-580
               

               
Cow position:
               
chr27:15865661-15865361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
54, 187
               

               
Conread position:
               
300-561
               

               
Cow position:
               
chr27:23107855-23108131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
55, 126
               

               
Conread position:
               
301-581
               

               
Cow position:
               
chr27:26852547-26852831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
47, 114
               

               
Conread position:
               
303-570
               

               
Cow position:
               
chr27:29593585-29593866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
47, 258
               

               
Conread position:
               
304-508
               

               
Cow position:
               
chr27:17918273-17918490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
305-576
               

               
Cow position:
               
chr27:26793746-26794028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
12, 36
               

               
Conread position:
               
308-504
               

               
Cow position:
               
chr27:4720074-4720284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
308-577
               

               
Cow position:
               
chr27:31386604-31386875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
42, 19
               

               
Conread position:
               
308-586
               

               
Cow position:
               
chr27:10599015-10598734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
111, 45
               

               
Conread position:
               
310-559
               

               
Cow position:
               
chr27:14303770-14303518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 197
               

               
Conread position:
               
311-452
               

               
Cow position:
               
chr27:21130344-21130187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
313-569
               

               
Cow position:
               
chr27:20517692-20517415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
14, 26
               

               
Conread position:
               
313-581
               

               
Cow position:
               
chr27:19607636-19607912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
98, 149
               

               
Conread position:
               
314-584
               

               
Cow position:
               
chr27:19933097-19932814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
35, 161
               

               
Conread position:
               
315-580
               

               
Cow position:
               
chr27:7304585-7304854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
100, 50
               

               
Conread position:
               
320-565
               

               
Cow position:
               
chr27:24035263-24035509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
35, 45
               

               
Conread position:
               
322-481
               

               
Cow position:
               
chr27:13376235-13376393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
324-490
               

               
Cow position:
               
chr27:237293-237114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
6, 132
               

               
Conread position:
               
324-579
               

               
Cow position:
               
chr27:26940081-26939831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 57
               

               
Conread position:
               
325-572
               

               
Cow position:
               
chr27:28242995-28242741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
26, 126
               

               
Conread position:
               
325-587
               

               
Cow position:
               
chr27:29280617-29280355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
27, 125
               

               
Conread position:
               
327-559
               

               
Cow position:
               
chr27:12710261-12710015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
9, 140
               

               
Conread position:
               
330-586
               

               
Cow position:
               
chr27:26617416-26617161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 88
               

               
Conread position:
               
333-496
               

               
Cow position:
               
chr27:23943154-23942984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
333-509
               

               
Cow position:
               
chr27:22348500-22348314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
336-580
               

               
Cow position:
               
chr27:23507654-23507402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
15, 240
               

               
Conread position:
               
341-509
               

               
Cow position:
               
chr27:30489414-30489586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
344-578
               

               
Cow position:
               
chr27:18435143-18435377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
75, 10
               

               
Conread position:
               
346-575
               

               
Cow position:
               
chr27:10323826-10323601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
156, 14
               

               
Conread position:
               
349-564
               

               
Cow position:
               
chr27:12459272-12459056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 55
               

               
Conread position:
               
349-580
               

               
Cow position:
               
chr27:16512181-16512415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
15, 141
               

               
Conread position:
               
349-588
               

               
Cow position:
               
chr27:5553456-5553213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
66, 56
               

               
Conread position:
               
353-586
               

               
Cow position:
               
chr27:26245563-26245803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
13, 8
               

               
Conread position:
               
354-577
               

               
Cow position:
               
chr27:212939-212706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
65, 40
               

               
Conread position:
               
359-579
               

               
Cow position:
               
chr27:23957493-23957271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
130, 39
               

               
Conread position:
               
359-581
               

               
Cow position:
               
chr27:6106677-6106458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 54
               

               
Conread position:
               
360-507
               

               
Cow position:
               
chr27:788821-788970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
56, 119
               

               
Conread position:
               
360-509
               

               
Cow position:
               
chr27:6674255-6674105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
360-578
               

               
Cow position:
               
chr27:13204435-13204219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
60, 139
               

               
Conread position:
               
360-581
               

               
Cow position:
               
chr27:12425266-12425039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
38, 98
               

               
Conread position:
               
360-584
               

               
Cow position:
               
chr27:7425212-7425440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
360-585
               

               
Cow position:
               
chr27:20897049-20897273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
360-586
               

               
Cow position:
               
chr27:24951986-24952204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
360-586
               

               
Cow position:
               
chr27:28478556-28478334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
59, 141
               

               
Conread position:
               
360-586
               

               
Cow position:
               
chr27:29597775-29597998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
134, 25
               

               
Conread position:
               
361-514
               

               
Cow position:
               
chr27:24305409-24305257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
361-575
               

               
Cow position:
               
chr27:23994445-23994658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
134, 31
               

               
Conread position:
               
361-575
               

               
Cow position:
               
chr27:27055261-27055053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
361-576
               

               
Cow position:
               
chr27:19508988-19508768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
361-579
               

               
Cow position:
               
chr27:31004917-31004695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
33, 148
               

               
Conread position:
               
361-581
               

               
Cow position:
               
chr27:590787-591017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
45, 216
               

               
Conread position:
               
362-575
               

               
Cow position:
               
chr27:15003004-15003222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
362-581
               

               
Cow position:
               
chr27:26437147-26437369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
52, 105
               

               
Conread position:
               
362-582
               

               
Cow position:
               
chr27:31169136-31169355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
363-508
               

               
Cow position:
               
chr27:20812878-20812732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
51, 126
               

               
Conread position:
               
363-577
               

               
Cow position:
               
chr27:26121733-26121513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
56, 107
               

               
Conread position:
               
363-581
               

               
Cow position:
               
chr27:31248646-31248855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
113, 19
               

               
Conread position:
               
365-489
               

               
Cow position:
               
chr27:22421880-22422007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
365-562
               

               
Cow position:
               
chr27:6319890-6319693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
54, 126
               

               
Conread position:
               
365-562
               

               
Cow position:
               
chr27:13318003-13318207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
50, 102
               

               
Conread position:
               
365-569
               

               
Cow position:
               
chr27:30455965-30455756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
50, 148
               

               
Conread position:
               
365-576
               

               
Cow position:
               
chr27:10404145-10404361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
365-577
               

               
Cow position:
               
chr27:30483326-30483549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 127
               

               
Conread position:
               
365-585
               

               
Cow position:
               
chr27:11982675-11982901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
50, 78
               

               
Conread position:
               
365-586
               

               
Cow position:
               
chr27:7343457-7343681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
54, 110
               

               
Conread position:
               
365-586
               

               
Cow position:
               
chr27:27740320-27740546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
54, 87
               

               
Conread position:
               
365-586
               

               
Cow position:
               
chr27:31170093-31170326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
111, 61
               

               
Conread position:
               
366-577
               

               
Cow position:
               
chr27:20719258-20719040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 104
               

               
Conread position:
               
366-581
               

               
Cow position:
               
chr27:13940587-13940799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
49, 101
               

               
Conread position:
               
367-507
               

               
Cow position:
               
chr27:6302499-6302641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
51, 69
               

               
Conread position:
               
367-512
               

               
Cow position:
               
chr27:30846627-30846478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
52, 28
               

               
Conread position:
               
367-569
               

               
Cow position:
               
chr27:11993897-11994105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 100
               

               
Conread position:
               
367-578
               

               
Cow position:
               
chr27:6241223-6241438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
51, 192
               

               
Conread position:
               
367-581
               

               
Cow position:
               
chr27:672624-672415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
115, 24
               

               
Conread position:
               
367-583
               

               
Cow position:
               
chr27:29388641-29388422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
42, 209
               

               
Conread position:
               
367-586
               

               
Cow position:
               
chr27:20486027-20485792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
26, 84
               

               
Conread position:
               
368-577
               

               
Cow position:
               
chr27:20612489-20612276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
107, 120
               

               
Conread position:
               
368-585
               

               
Cow position:
               
chr27:8790773-8790997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
48, 161
               

               
Conread position:
               
368-585
               

               
Cow position:
               
chr27:22245594-22245389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 71
               

               
Conread position:
               
368-588
               

               
Cow position:
               
chr27:26853392-26853608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
209, 156
               

               
Conread position:
               
369-496
               

               
Cow position:
               
chr27:11466498-11466626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 114
               

               
Conread position:
               
369-569
               

               
Cow position:
               
chr27:26323415-26323205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
50, 19
               

               
Conread position:
               
369-570
               

               
Cow position:
               
chr27:25152052-25151851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
140, 46
               

               
Conread position:
               
369-581
               

               
Cow position:
               
chr27:6162443-6162653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
51, 100
               

               
Conread position:
               
369-587
               

               
Cow position:
               
chr27:19452969-19452744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
47, 100
               

               
Conread position:
               
370-585
               

               
Cow position:
               
chr27:3518471-3518249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
49, 100
               

               
Conread position:
               
372-569
               

               
Cow position:
               
chr27:24693377-24693181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
47, 57
               

               
Conread position:
               
372-583
               

               
Cow position:
               
chr27:19557349-19557141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
196, 115
               

               
Conread position:
               
372-587
               

               
Cow position:
               
chr27:31210511-31210294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
42, 103
               

               
Conread position:
               
373-586
               

               
Cow position:
               
chr27:24223915-24223703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
43, 172
               

               
Conread position:
               
374-570
               

               
Cow position:
               
chr27:17102858-17102662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
44, 81
               

               
Conread position:
               
375-572
               

               
Cow position:
               
chr27:20770567-20770756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
44, 113
               

               
Conread position:
               
376-581
               

               
Cow position:
               
chr27:24303907-24303694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
42, 94
               

               
Conread position:
               
378-581
               

               
Cow position:
               
chr27:30881891-30882108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
27, 70
               

               
Conread position:
               
378-585
               

               
Cow position:
               
chr27:29615000-29614789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
378-586
               

               
Cow position:
               
chr27:19576365-19576577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
378-586
               

               
Cow position:
               
chr27:26400763-26400973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
37, 120
               

               
Conread position:
               
379-584
               

               
Cow position:
               
chr27:21661090-21660884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
380-586
               

               
Cow position:
               
chr27:30797856-30798058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
33, 126
               

               
Conread position:
               
382-570
               

               
Cow position:
               
chr27:5539741-5539930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
37, 88
               

               
Conread position:
               
382-586
               

               
Cow position:
               
chr27:10581483-10581280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
121, 25
               

               
Conread position:
               
382-587
               

               
Cow position:
               
chr27:18688455-18688668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
37, 88
               

               
Conread position:
               
383-563
               

               
Cow position:
               
chr27:15859344-15859528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
383-567
               

               
Cow position:
               
chr27:22268178-22267985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
123, 30
               

               
Conread position:
               
383-585
               

               
Cow position:
               
chr27:9504504-9504297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 20
               

               
Conread position:
               
383-586
               

               
Cow position:
               
chr27:11134039-11133834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
385-513
               

               
Cow position:
               
chr27:23504010-23504140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
29, 128
               

               
Conread position:
               
385-561
               

               
Cow position:
               
chr27:26504253-26504075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
385-563
               

               
Cow position:
               
chr27:21025637-21025466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
34, 97
               

               
Conread position:
               
385-566
               

               
Cow position:
               
chr27:232505-232317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
30, 86
               

               
Conread position:
               
385-567
               

               
Cow position:
               
chr27:1184226-1184408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
34, 114
               

               
Conread position:
               
385-570
               

               
Cow position:
               
chr27:29308294-29308105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
98, 36
               

               
Conread position:
               
385-585
               

               
Cow position:
               
chr27:12284945-12284740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
34, 28
               

               
Conread position:
               
386-575
               

               
Cow position:
               
chr27:2949377-2949559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
32, 53
               

               
Conread position:
               
387-578
               

               
Cow position:
               
chr27:26314177-26314372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
15, 11
               

               
Conread position:
               
388-580
               

               
Cow position:
               
chr27:26565736-26565547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
86, 63
               

               
Conread position:
               
388-586
               

               
Cow position:
               
chr27:11349224-11349031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
91, 25
               

               
Conread position:
               
388-586
               

               
Cow position:
               
chr27:21419242-21419436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
19, 81
               

               
Conread position:
               
389-586
               

               
Cow position:
               
chr27:4398544-4398739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
30, 106
               

               
Conread position:
               
390-570
               

               
Cow position:
               
chr27:20325090-20324901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
390-579
               

               
Cow position:
               
chr27:24358279-24358093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
26, 59
               

               
Conread position:
               
390-582
               

               
Cow position:
               
chr27:28062258-28062444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
391-564
               

               
Cow position:
               
chr27:31498724-31498551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
93, 22
               

               
Conread position:
               
392-577
               

               
Cow position:
               
chr27:20048578-20048392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
26, 110
               

               
Conread position:
               
392-580
               

               
Cow position:
               
chr27:27528876-27529062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 112
               

               
Conread position:
               
392-586
               

               
Cow position:
               
chr27:18791565-18791768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
23, 80
               

               
Conread position:
               
393-570
               

               
Cow position:
               
chr27:1067511-1067338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
25, 100
               

               
Conread position:
               
395-581
               

               
Cow position:
               
chr27:29246210-29246393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
109, 20
               

               
Conread position:
               
399-585
               

               
Cow position:
               
chr27:20325288-20325103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
20, 83
               

               
Conread position:
               
406-581
               

               
Cow position:
               
chr27:22102716-22102890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
106, 57
               

               
Conread position:
               
407-585
               

               
Cow position:
               
chr27:3698748-3698926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
102, 17
               

               
Conread position:
               
411-586
               

               
Cow position:
               
chr27:18873970-18873799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
65, 56
               

               
Conread position:
               
412-577
               

               
Cow position:
               
chr27:22583668-22583498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
68, 55
               

               
Conread position:
               
413-557
               

               
Cow position:
               
chr27:23060193-23060341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
65, 50
               

               
Conread position:
               
413-559
               

               
Cow position:
               
chr27:23100728-23100872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
137, 70
               

               
Conread position:
               
413-563
               

               
Cow position:
               
chr27:23177392-23177543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
64, 54
               

               
Conread position:
               
413-564
               

               
Cow position:
               
chr27:23477866-23477716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
413-566
               

               
Cow position:
               
chr27:26909671-26909822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
413-566
               

               
Cow position:
               
chr27:31031375-31031233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
413-567
               

               
Cow position:
               
chr27:9253193-9253347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
413-569
               

               
Cow position:
               
chr27:29961662-29961813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
413-574
               

               
Cow position:
               
chr27:31157732-31157568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
88, 54
               

               
Conread position:
               
413-578
               

               
Cow position:
               
chr27:26118420-26118251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
63, 54
               

               
Conread position:
               
413-579
               

               
Cow position:
               
chr27:11145799-11145635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
413-579
               

               
Cow position:
               
chr27:21951058-21951227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
413-582
               

               
Cow position:
               
chr27:3498471-3498306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
413-582
               

               
Cow position:
               
chr27:31183496-31183323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
82, 154
               

               
Conread position:
               
413-583
               

               
Cow position:
               
chr27:18491476-18491305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
125, 67
               

               
Conread position:
               
413-584
               

               
Cow position:
               
chr27:30884948-30884776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
89, 149
               

               
Conread position:
               
413-586
               

               
Cow position:
               
chr27:11528851-11528676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
89, 160
               

               
Conread position:
               
413-586
               

               
Cow position:
               
chr27:15434245-15434079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
86, 126
               

               
Conread position:
               
413-586
               

               
Cow position:
               
chr27:20081208-20081388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
413-586
               

               
Cow position:
               
chr27:23232836-23232658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
59, 54
               

               
Conread position:
               
413-586
               

               
Cow position:
               
chr27:27449965-27450139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
157, 85
               

               
Conread position:
               
413-586
               

               
Cow position:
               
chr27:31153637-31153808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
36, 133
               

               
Conread position:
               
413-587
               

               
Cow position:
               
chr27:26980042-26980220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
63, 54
               

               
Conread position:
               
414-585
               

               
Cow position:
               
chr27:22748247-22748075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
415-575
               

               
Cow position:
               
chr27:178781-178620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
415-586
               

               
Cow position:
               
chr27:24755523-24755357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
416-575
               

               
Cow position:
               
chr27:28476196-28476351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
416-577
               

               
Cow position:
               
chr27:11208637-11208802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
64, 51
               

               
Conread position:
               
416-582
               

               
Cow position:
               
chr27:19992071-19991899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
416-586
               

               
Cow position:
               
chr27:21143151-21143330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
71, 168
               

               
Conread position:
               
416-586
               

               
Cow position:
               
chr27:25000043-25000221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
417-565
               

               
Cow position:
               
chr27:16504994-16505139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
63, 50
               

               
Conread position:
               
417-581
               

               
Cow position:
               
chr27:26317982-26317818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
80, 129
               

               
Conread position:
               
417-587
               

               
Cow position:
               
chr27:20561497-20561333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
419-567
               

               
Cow position:
               
chr27:29183302-29183461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
421-575
               

               
Cow position:
               
chr27:23760069-23760221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
421-581
               

               
Cow position:
               
chr27:4413907-4414064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
422-585
               

               
Cow position:
               
chr27:26154232-26154062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
424-570
               

               
Cow position:
               
chr27:26467650-26467799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 9
               

               
Conread position:
               
424-584
               

               
Cow position:
               
chr27:21101381-21101544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
85, 63
               

               
Conread position:
               
424-587
               

               
Cow position:
               
chr27:21447920-21448077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
427-586
               

               
Cow position:
               
chr27:4486871-4487034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
65, 40
               

               
Conread position:
               
428-576
               

               
Cow position:
               
chr27:21054365-21054213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
428-585
               

               
Cow position:
               
chr27:22150789-22150946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
429-566
               

               
Cow position:
               
chr27:624314-624452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
125, 23
               

               
Conread position:
               
432-588
               

               
Cow position:
               
chr27:28192714-28192869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
109, 67
               

               
Conread position:
               
437-586
               

               
Cow position:
               
chr27:2934400-2934255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
54, 89
               

               
Conread position:
               
438-586
               

               
Cow position:
               
chr27:23527606-23527753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
440-581
               

               
Cow position:
               
chr27:19653678-19653826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
36, 26
               

               
Conread position:
               
466-585
               

               
Cow position:
               
chr27:26315274-26315394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
475-575
               

               
Cow position:
               
chr27:14675317-14675415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
477-570
               

               
Cow position:
               
chr27:23996263-23996359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               
Show alignments to all cow chromosomes.