Cow genome map

Conread name: Ss1.1-Emb1-C0005188_J06.5

Conread position: 22-329
Cow position: chrX:10415884-10415573 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 213
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 17, 70

Conread position: 29-400
Cow position: chrX:16074221-16074619 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 259
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 69

Conread position: 35-377
Cow position: chrX:16478554-16478922 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 246
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 33, 60

Conread position: 36-337
Cow position: chrX:4404194-4404511 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 217
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 17

Conread position: 36-341
Cow position: chrX:46606858-46606530 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 228
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 60

Conread position: 36-347
Cow position: chrX:30162651-30162981 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 231
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 8, 61

Conread position: 36-397
Cow position: chrX:34990700-34991080 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 36-500
Cow position: chrX:5047239-5046768 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 310
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 32, 40

Conread position: 36-568
Cow position: chrX:35273007-35273593 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 34

Conread position: 44-582
Cow position: chrX:7350968-7351535 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 46

Conread position: 50-400
Cow position: chrX:26709279-26709647 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 249
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 35

Conread position: 52-348
Cow position: chrX:34270090-34270386 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 185
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 63, 108

Conread position: 54-509
Cow position: chrX:36311275-36311727 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 303
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 36

Conread position: 60-573
Cow position: chrX:41526836-41526308 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 20

Conread position: 60-581
Cow position: chrX:34441765-34441219 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 30

Conread position: 62-514
Cow position: chrX:38007082-38006604 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 9

Conread position: 67-303
Cow position: chrX:33205302-33205050 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 48, 19

Conread position: 67-341
Cow position: chrX:24413720-24414013 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 43, 22

Conread position: 67-342
Cow position: chrX:19019402-19019127 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 218
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 103, 25

Conread position: 69-347
Cow position: chrX:43648052-43647763 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 209
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 46, 17

Conread position: 69-448
Cow position: chrX:26441088-26440687 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 20

Conread position: 69-586
Cow position: chrX:15147492-15146960 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 20

Conread position: 70-229
Cow position: chrX:45410350-45410179 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 27

Conread position: 70-231
Cow position: chrX:2351755-2351927 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 19

Conread position: 70-239
Cow position: chrX:616710-616532 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 45, 19

Conread position: 70-243
Cow position: chrX:27458948-27459133 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 45, 23

Conread position: 70-243
Cow position: chrX:30060838-30060654 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 19

Conread position: 70-249
Cow position: chrX:3570144-3570336 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 19

Conread position: 70-256
Cow position: chrX:22811579-22811774 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 19

Conread position: 70-256
Cow position: chrX:39386572-39386377 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 19

Conread position: 70-256
Cow position: chrX:45467527-45467330 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 19

Conread position: 70-259
Cow position: chrX:32871093-32870890 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 155
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 50, 22

Conread position: 70-260
Cow position: chrX:32144470-32144271 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 19

Conread position: 70-276
Cow position: chrX:38151381-38151599 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 19

Conread position: 70-280
Cow position: chrX:26619668-26619444 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 12

Conread position: 70-280
Cow position: chrX:40515596-40515811 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 22

Conread position: 70-286
Cow position: chrX:7382017-7382246 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 176
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 45, 19

Conread position: 70-286
Cow position: chrX:34009443-34009673 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 19

Conread position: 70-289
Cow position: chrX:25283447-25283224 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 174
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 54, 19

Conread position: 70-291
Cow position: chrX:45043251-45043493 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 19

Conread position: 70-313
Cow position: chrX:21227165-21227425 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 45, 19

Conread position: 70-320
Cow position: chrX:3161323-3161055 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 45, 19

Conread position: 70-323
Cow position: chrX:7806071-7806342 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 45, 16

Conread position: 70-325
Cow position: chrX:39699019-39699285 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 45, 19

Conread position: 70-327
Cow position: chrX:4123528-4123802 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 216
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 45, 19

Conread position: 70-330
Cow position: chrX:36250169-36249894 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 19

Conread position: 70-330
Cow position: chrX:48287747-48287482 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 45, 22

Conread position: 70-332
Cow position: chrX:42462055-42461775 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 205
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 45, 19

Conread position: 70-334
Cow position: chrX:35409361-35409628 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 206
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 45, 23

Conread position: 70-335
Cow position: chrX:25458944-25458660 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 203
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 45, 19

Conread position: 70-336
Cow position: chrX:36692928-36693209 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 192
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 22

Conread position: 70-336
Cow position: chrX:44731293-44731571 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 207
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 45, 19

Conread position: 70-337
Cow position: chrX:20038525-20038241 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 198
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 19

Conread position: 70-337
Cow position: chrX:20878070-20877784 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 202
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 19

Conread position: 70-337
Cow position: chrX:24441554-24441268 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 191
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 19

Conread position: 70-337
Cow position: chrX:30454929-30454643 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 195
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 45, 19

Conread position: 70-337
Cow position: chrX:32094757-32094471 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 193
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 19

Conread position: 70-337
Cow position: chrX:39559959-39559673 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 45, 19

Conread position: 70-337
Cow position: chrX:41157004-41157290 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 19

Conread position: 70-337
Cow position: chrX:45089130-45089423 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 209
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 33, 21

Conread position: 70-338
Cow position: chrX:47386238-47385952 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 19

Conread position: 70-339
Cow position: chrX:8530233-8530520 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 200
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 19

Conread position: 70-339
Cow position: chrX:16078362-16078639 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 188
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 19

Conread position: 70-339
Cow position: chrX:21665898-21665616 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 211
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 58, 19

Conread position: 70-340
Cow position: chrX:7444777-7445065 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 50, 19

Conread position: 70-340
Cow position: chrX:16706492-16706784 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 36, 19

Conread position: 70-340
Cow position: chrX:16713890-16714178 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 203
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 45, 19

Conread position: 70-340
Cow position: chrX:26275832-26276121 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 201
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 19

Conread position: 70-340
Cow position: chrX:27105951-27106240 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 207
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:828585-828870 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 198
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:1947028-1946733 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 203
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:2104098-2104384 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 194
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 19

Conread position: 70-341
Cow position: chrX:3361512-3361801 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 197
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 50, 19

Conread position: 70-341
Cow position: chrX:3464383-3464095 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 201
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:3895283-3894993 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 199
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 19

Conread position: 70-341
Cow position: chrX:4905296-4905008 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 201
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:5376062-5376353 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 199
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 19

Conread position: 70-341
Cow position: chrX:6655574-6655284 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 207
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:6869870-6869579 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 200
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:7551102-7550813 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 195
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 50, 19

Conread position: 70-341
Cow position: chrX:8782437-8782727 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 201
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:9096360-9096648 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 198
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:11145645-11145355 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 195
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 46, 19

Conread position: 70-341
Cow position: chrX:11725574-11725280 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 203
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 50, 19

Conread position: 70-341
Cow position: chrX:11820051-11820331 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 199
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 45, 22

Conread position: 70-341
Cow position: chrX:11949800-11949518 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 195
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:11975794-11975512 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 195
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 50, 19

Conread position: 70-341
Cow position: chrX:12466188-12466476 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 205
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 50, 19

Conread position: 70-341
Cow position: chrX:14152522-14152240 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 50, 19

Conread position: 70-341
Cow position: chrX:14598538-14598828 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 199
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:14846381-14846091 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 202
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:15120196-15119906 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:15531462-15531172 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 204
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 50, 19

Conread position: 70-341
Cow position: chrX:16359316-16359032 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 62, 19

Conread position: 70-341
Cow position: chrX:16465993-16466284 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 201
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 19

Conread position: 70-341
Cow position: chrX:16783187-16783470 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 200
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 45, 21

Conread position: 70-341
Cow position: chrX:18656112-18655822 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 19

Conread position: 70-341
Cow position: chrX:19196825-19196535 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 196
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:20321074-20320785 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:20742679-20742969 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:20945261-20945543 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:21833578-21833868 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:22493700-22493990 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:22821107-22821397 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 204
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 50, 19

Conread position: 70-341
Cow position: chrX:22888351-22888642 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 22

Conread position: 70-341
Cow position: chrX:23215800-23216090 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 201
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:23280699-23280986 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 202
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:23572107-23571817 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 207
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 50, 19

Conread position: 70-341
Cow position: chrX:26531651-26531941 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 206
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:26754936-26754663 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 193
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:27498461-27498751 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 202
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:27590340-27590058 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 198
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 66, 19

Conread position: 70-341
Cow position: chrX:27627048-27627338 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:27997343-27997629 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 191
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:28559142-28558852 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:29083818-29084103 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 50, 19

Conread position: 70-341
Cow position: chrX:30143591-30143302 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 50, 22

Conread position: 70-341
Cow position: chrX:30159318-30159028 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 204
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:30228417-30228130 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 200
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 12

Conread position: 70-341
Cow position: chrX:30531339-30531045 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 199
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 40, 19

Conread position: 70-341
Cow position: chrX:31449929-31449640 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 196
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:32010724-32011014 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 205
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:35533544-35533834 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 207
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:37816281-37816571 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 204
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:38051739-38051451 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 201
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 35, 19

Conread position: 70-341
Cow position: chrX:39549023-39549303 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 19

Conread position: 70-341
Cow position: chrX:39704398-39704676 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 196
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 50, 19

Conread position: 70-341
Cow position: chrX:39714242-39714532 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 40, 16

Conread position: 70-341
Cow position: chrX:40180177-40179897 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 190
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:40544917-40544625 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:41103481-41103769 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 193
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:42165768-42166058 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 199
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:43979311-43979603 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 202
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:44387683-44387968 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 53, 19

Conread position: 70-341
Cow position: chrX:44557772-44558062 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 202
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:45237159-45237449 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 196
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 19

Conread position: 70-341
Cow position: chrX:45786823-45787109 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 202
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:45903871-45904161 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 19

Conread position: 70-341
Cow position: chrX:45932697-45932987 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 195
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 19

Conread position: 70-341
Cow position: chrX:47362193-47361912 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 19

Conread position: 70-342
Cow position: chrX:17743763-17744044 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 106, 19

Conread position: 70-343
Cow position: chrX:21011629-21011336 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 200
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 50, 19

Conread position: 70-344
Cow position: chrX:5353610-5353316 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 197
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 43, 19

Conread position: 70-344
Cow position: chrX:6493425-6493713 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 196
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 19

Conread position: 70-346
Cow position: chrX:39556123-39555854 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 211
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 50, 19

Conread position: 70-347
Cow position: chrX:25419467-25419173 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 214
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 50, 19

Conread position: 70-347
Cow position: chrX:33803322-33803022 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 206
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 19

Conread position: 70-348
Cow position: chrX:10306366-10306659 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 211
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 45, 19

Conread position: 70-348
Cow position: chrX:47379774-47379483 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 50, 19

Conread position: 70-351
Cow position: chrX:1810468-1810175 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 218
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 44, 19

Conread position: 70-351
Cow position: chrX:10437958-10437680 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 28, 19

Conread position: 70-351
Cow position: chrX:12115734-12116034 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 213
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 45, 19

Conread position: 70-351
Cow position: chrX:14924693-14924989 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 70-351
Cow position: chrX:22078020-22078320 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 207
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 19

Conread position: 70-351
Cow position: chrX:25946141-25945842 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 220
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 45, 19

Conread position: 70-351
Cow position: chrX:27977136-27976838 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 198
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 50, 19

Conread position: 70-351
Cow position: chrX:29876358-29876086 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 197
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 22

Conread position: 70-351
Cow position: chrX:32747351-32747672 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 235
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 45, 19

Conread position: 70-351
Cow position: chrX:45412959-45412671 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 203
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 50, 16

Conread position: 70-356
Cow position: chrX:3649115-3648823 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 210
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 45, 19

Conread position: 70-356
Cow position: chrX:23024397-23024699 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 205
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 45, 19

Conread position: 70-357
Cow position: chrX:37843413-37843714 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 226
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 45, 19

Conread position: 70-357
Cow position: chrX:45373599-45373297 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 211
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 50, 19

Conread position: 70-362
Cow position: chrX:11674751-11675063 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 222
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 45, 19

Conread position: 70-362
Cow position: chrX:11806323-11806014 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 228
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 45, 22

Conread position: 70-362
Cow position: chrX:13971534-13971223 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 212
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 50, 22

Conread position: 70-362
Cow position: chrX:35609679-35609989 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 70-362
Cow position: chrX:40648359-40648650 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 207
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 45, 19

Conread position: 70-362
Cow position: chrX:41790747-41790443 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 211
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 22

Conread position: 70-363
Cow position: chrX:20582723-20583021 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 234
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 35, 22

Conread position: 70-363
Cow position: chrX:27095812-27096114 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 208
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 19

Conread position: 70-364
Cow position: chrX:41403654-41403981 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 235
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 50, 22

Conread position: 70-364
Cow position: chrX:41410202-41410529 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 235
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 50, 22

Conread position: 70-367
Cow position: chrX:16289869-16289553 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 45, 19

Conread position: 70-368
Cow position: chrX:18999591-18999893 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 212
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 45, 19

Conread position: 70-369
Cow position: chrX:5739520-5739203 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 216
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 45, 19

Conread position: 70-369
Cow position: chrX:8434514-8434197 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 212
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 19

Conread position: 70-369
Cow position: chrX:15577948-15577631 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 219
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 50, 19

Conread position: 70-369
Cow position: chrX:17497789-17498091 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 224
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 45, 22

Conread position: 70-369
Cow position: chrX:29903435-29903753 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 212
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 19

Conread position: 70-370
Cow position: chrX:14162884-14163200 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 223
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 45, 19

Conread position: 70-370
Cow position: chrX:18897958-18897644 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 220
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 45, 19

Conread position: 70-370
Cow position: chrX:21062910-21063224 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 215
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 18

Conread position: 70-370
Cow position: chrX:30180233-30179928 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 216
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 22

Conread position: 70-377
Cow position: chrX:11715769-11715442 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 218
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 19

Conread position: 70-377
Cow position: chrX:23122077-23122401 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 235
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 26, 19

Conread position: 70-377
Cow position: chrX:30199299-30198972 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 219
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 50, 19

Conread position: 70-377
Cow position: chrX:36240088-36240415 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 219
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 19

Conread position: 70-378
Cow position: chrX:21785461-21785783 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 217
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 45, 19

Conread position: 70-385
Cow position: chrX:21415781-21416117 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 234
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 50, 19

Conread position: 70-386
Cow position: chrX:11581628-11581966 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 234
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 19

Conread position: 70-386
Cow position: chrX:12826440-12826768 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 234
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 43, 22

Conread position: 70-396
Cow position: chrX:3405662-3405322 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 226
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 19

Conread position: 70-398
Cow position: chrX:29848938-29848594 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 235
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 19

Conread position: 70-399
Cow position: chrX:34754499-34754146 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 256
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 45, 16

Conread position: 70-400
Cow position: chrX:671316-670966 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 232
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 19

Conread position: 70-400
Cow position: chrX:5123668-5123318 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 238
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 50, 19

Conread position: 70-400
Cow position: chrX:6372874-6373223 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 237
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 50, 19

Conread position: 70-400
Cow position: chrX:10428233-10428582 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 233
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 51, 19

Conread position: 70-400
Cow position: chrX:14122059-14121709 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 237
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 19

Conread position: 70-400
Cow position: chrX:14134168-14134518 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 231
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 13

Conread position: 70-400
Cow position: chrX:14801125-14800775 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 233
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 19

Conread position: 70-400
Cow position: chrX:15438956-15438610 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 226
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 19

Conread position: 70-400
Cow position: chrX:16279342-16279692 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 242
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 50, 19

Conread position: 70-400
Cow position: chrX:17055262-17055612 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 227
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 46, 19

Conread position: 70-400
Cow position: chrX:17783192-17783542 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 232
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 45, 19

Conread position: 70-400
Cow position: chrX:24769167-24768821 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 230
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 19

Conread position: 70-400
Cow position: chrX:27305619-27305969 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 230
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 19

Conread position: 70-400
Cow position: chrX:30172017-30171667 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 233
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 19

Conread position: 70-400
Cow position: chrX:30686903-30686550 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 242
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 40, 19

Conread position: 70-400
Cow position: chrX:34761759-34762109 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 232
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 19

Conread position: 70-400
Cow position: chrX:35612851-35612502 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 232
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 19

Conread position: 70-400
Cow position: chrX:38230574-38230224 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 236
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 50, 19

Conread position: 70-400
Cow position: chrX:40591379-40591719 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 235
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 19

Conread position: 70-400
Cow position: chrX:42779433-42779083 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 239
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 19

Conread position: 70-400
Cow position: chrX:43101220-43101568 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 236
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 50, 19

Conread position: 70-400
Cow position: chrX:45263375-45263026 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 239
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 19

Conread position: 70-400
Cow position: chrX:46579162-46578812 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 237
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 45, 19

Conread position: 70-401
Cow position: chrX:28105619-28105966 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 235
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 74, 19

Conread position: 70-401
Cow position: chrX:40452520-40452170 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 70-404
Cow position: chrX:16790129-16789805 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 249
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 46, 25

Conread position: 70-406
Cow position: chrX:38577226-38577566 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 243
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 45, 19

Conread position: 70-408
Cow position: chrX:18950052-18949693 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 245
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 19

Conread position: 70-408
Cow position: chrX:28845537-28845874 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 253
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 45, 19

Conread position: 70-414
Cow position: chrX:21686313-21686670 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 240
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 45, 19

Conread position: 70-414
Cow position: chrX:38014787-38015150 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 240
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 19

Conread position: 70-414
Cow position: chrX:43767844-43767481 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 241
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 19

Conread position: 70-416
Cow position: chrX:2499647-2499279 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 240
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 45, 19

Conread position: 70-417
Cow position: chrX:19188629-19188995 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 70-434
Cow position: chrX:42507951-42507564 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 274
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 45, 19

Conread position: 70-448
Cow position: chrX:20709768-20710171 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 22

Conread position: 70-460
Cow position: chrX:27761033-27761450 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 278
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 19

Conread position: 70-464
Cow position: chrX:38936392-38936814 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 295
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 46, 22

Conread position: 70-481
Cow position: chrX:23583251-23583691 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 306
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 40, 19

Conread position: 70-481
Cow position: chrX:38072074-38071641 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 292
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 54, 19

Conread position: 70-483
Cow position: chrX:39546280-39545849 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 288
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 50, 19

Conread position: 70-484
Cow position: chrX:37232104-37232541 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 318

Conread position: 70-485
Cow position: chrX:10412293-10411849 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 70-490
Cow position: chrX:32743231-32743673 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 300
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 45, 19

Conread position: 70-490
Cow position: chrX:35288353-35288795 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 298
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 40, 22

Conread position: 70-493
Cow position: chrX:17964822-17964379 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 293
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 45, 19

Conread position: 70-494
Cow position: chrX:7571599-7572050 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 70-495
Cow position: chrX:29289269-29289723 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 22

Conread position: 70-499
Cow position: chrX:43527196-43527657 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 22

Conread position: 70-500
Cow position: chrX:25337870-25338336 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 324
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 40, 19

Conread position: 70-501
Cow position: chrX:30543589-30543134 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 70-503
Cow position: chrX:4044165-4043714 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 70-503
Cow position: chrX:11082921-11082468 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 19

Conread position: 70-503
Cow position: chrX:40557983-40557523 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 22

Conread position: 70-506
Cow position: chrX:8796944-8797405 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 20

Conread position: 70-507
Cow position: chrX:11718087-11717626 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 19

Conread position: 70-508
Cow position: chrX:878676-878222 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 129

Conread position: 70-508
Cow position: chrX:18695228-18694770 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 21

Conread position: 70-508
Cow position: chrX:24424699-24424245 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 27

Conread position: 70-508
Cow position: chrX:31373271-31373694 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 307
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 54, 19

Conread position: 70-508
Cow position: chrX:34401691-34402164 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 23

Conread position: 70-509
Cow position: chrX:5017713-5017262 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 21

Conread position: 70-509
Cow position: chrX:7718549-7718991 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 70-509
Cow position: chrX:20697910-20697454 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 19

Conread position: 70-509
Cow position: chrX:27516226-27516677 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 70-509
Cow position: chrX:34192374-34192817 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 22

Conread position: 70-509
Cow position: chrX:38227397-38226951 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 70-509
Cow position: chrX:42171603-42171139 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 21

Conread position: 70-512
Cow position: chrX:28134042-28134504 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 70-514
Cow position: chrX:28787060-28787512 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 306
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 45, 21

Conread position: 70-516
Cow position: chrX:45113329-45113783 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 326
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 45, 22

Conread position: 70-537
Cow position: chrX:28866296-28865814 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 22

Conread position: 70-540
Cow position: chrX:24288220-24287740 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 337
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 45, 19

Conread position: 70-543
Cow position: chrX:13648091-13647588 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 70-555
Cow position: chrX:46771279-46770754 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 16

Conread position: 70-559
Cow position: chrX:12309695-12309173 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 19

Conread position: 70-562
Cow position: chrX:34238413-34238938 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 246

Conread position: 70-563
Cow position: chrX:1616358-1615842 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 22

Conread position: 70-563
Cow position: chrX:15596738-15597244 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 23

Conread position: 70-563
Cow position: chrX:41192383-41192905 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 22

Conread position: 70-564
Cow position: chrX:13868390-13868921 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 70-565
Cow position: chrX:8899717-8900237 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 344
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 45, 19

Conread position: 70-568
Cow position: chrX:15329346-15329843 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 350
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 45, 19

Conread position: 70-570
Cow position: chrX:2300624-2301146 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 345
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 45, 19

Conread position: 70-570
Cow position: chrX:7277621-7278129 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 19

Conread position: 70-570
Cow position: chrX:44396713-44397234 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 19

Conread position: 70-575
Cow position: chrX:161121-161628 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 70-575
Cow position: chrX:22115589-22115086 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 22

Conread position: 70-575
Cow position: chrX:47211157-47210607 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 361
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 21

Conread position: 70-576
Cow position: chrX:21592979-21593520 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 70-576
Cow position: chrX:28847183-28846664 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 70-577
Cow position: chrX:9252481-9251933 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 70-577
Cow position: chrX:14884271-14883727 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 22

Conread position: 70-577
Cow position: chrX:45501841-45502364 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 19

Conread position: 70-578
Cow position: chrX:12249494-12250045 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 22

Conread position: 70-578
Cow position: chrX:38218411-38218944 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 22

Conread position: 70-579
Cow position: chrX:42086555-42087058 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 70-579
Cow position: chrX:42247483-42246949 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 70-579
Cow position: chrX:45967855-45968369 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 70-579
Cow position: chrX:47873648-47873104 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 358
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 45, 19

Conread position: 70-580
Cow position: chrX:40827054-40826517 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 70-581
Cow position: chrX:6413739-6414266 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 22

Conread position: 70-581
Cow position: chrX:7645951-7646470 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 70-581
Cow position: chrX:7695457-7695997 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 18

Conread position: 70-581
Cow position: chrX:11655772-11656312 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 70-581
Cow position: chrX:11844545-11844002 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 19

Conread position: 70-581
Cow position: chrX:12290430-12290952 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 22

Conread position: 70-581
Cow position: chrX:14974035-14973523 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 22

Conread position: 70-581
Cow position: chrX:20340198-20339661 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 70-581
Cow position: chrX:23564104-23563556 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 19

Conread position: 70-581
Cow position: chrX:31443127-31442605 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 70-581
Cow position: chrX:34376646-34377173 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 22

Conread position: 70-581
Cow position: chrX:35268583-35269090 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 70-581
Cow position: chrX:35633060-35632511 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 350
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 52, 19

Conread position: 70-581
Cow position: chrX:41122765-41123279 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 22

Conread position: 70-582
Cow position: chrX:9651352-9650793 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 70-583
Cow position: chrX:12437543-12437047 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 27

Conread position: 70-583
Cow position: chrX:27446384-27446919 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 19

Conread position: 70-583
Cow position: chrX:38094832-38094290 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 70-584
Cow position: chrX:15007458-15006922 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 22

Conread position: 70-584
Cow position: chrX:18078217-18077679 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 318
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 19

Conread position: 70-584
Cow position: chrX:39174520-39173977 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 349
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 19

Conread position: 70-584
Cow position: chrX:42994307-42994834 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 70-585
Cow position: chrX:4996308-4996825 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 19

Conread position: 70-585
Cow position: chrX:10866174-10865633 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 70-585
Cow position: chrX:25713502-25714011 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 338
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 55, 19

Conread position: 70-585
Cow position: chrX:37072099-37072622 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 22

Conread position: 70-586
Cow position: chrX:151594-152145 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 22

Conread position: 70-586
Cow position: chrX:4633158-4632615 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 22

Conread position: 70-586
Cow position: chrX:6543949-6544484 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 22

Conread position: 70-586
Cow position: chrX:20887951-20887409 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 19

Conread position: 70-586
Cow position: chrX:27442859-27442297 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 19

Conread position: 70-586
Cow position: chrX:27705286-27705828 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 16

Conread position: 70-586
Cow position: chrX:41879237-41878696 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 70-587
Cow position: chrX:126484-127003 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 348
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 45, 22

Conread position: 70-587
Cow position: chrX:5118790-5118257 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 19

Conread position: 70-587
Cow position: chrX:7178605-7179121 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 70-587
Cow position: chrX:11614414-11614915 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 70-587
Cow position: chrX:32309794-32310325 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 372
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 40, 19

Conread position: 70-587
Cow position: chrX:35223995-35224516 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 22

Conread position: 70-587
Cow position: chrX:44054498-44055043 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 16

Conread position: 71-277
Cow position: chrX:12852815-12852592 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 44, 21

Conread position: 71-327
Cow position: chrX:12179662-12179931 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 18

Conread position: 71-340
Cow position: chrX:11314084-11313806 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 204
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 45, 18

Conread position: 71-340
Cow position: chrX:44980343-44980055 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 199
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 49, 18

Conread position: 71-341
Cow position: chrX:29841475-29841186 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 196
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 18

Conread position: 71-357
Cow position: chrX:24200892-24201181 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 209
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 45, 18

Conread position: 71-363
Cow position: chrX:25848609-25848914 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 222
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 44, 21

Conread position: 71-363
Cow position: chrX:48370790-48371090 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 221
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 49, 18

Conread position: 71-408
Cow position: chrX:35240558-35240913 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 241
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 44, 18

Conread position: 71-506
Cow position: chrX:5872007-5872473 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 283

Conread position: 71-509
Cow position: chrX:40269170-40269653 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 21

Conread position: 71-550
Cow position: chrX:21063980-21064485 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 18

Conread position: 71-568
Cow position: chrX:31436174-31436690 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 18

Conread position: 71-570
Cow position: chrX:17794689-17795202 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 21

Conread position: 71-572
Cow position: chrX:28632784-28632257 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 18

Conread position: 71-576
Cow position: chrX:33466311-33466851 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 18

Conread position: 71-577
Cow position: chrX:15485931-15485403 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 21

Conread position: 71-580
Cow position: chrX:45430324-45429798 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 22

Conread position: 71-581
Cow position: chrX:22812756-22813299 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 18

Conread position: 71-581
Cow position: chrX:34564994-34565519 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 18

Conread position: 71-585
Cow position: chrX:25035692-25035141 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 18

Conread position: 72-400
Cow position: chrX:5288992-5288644 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 232
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 43, 17

Conread position: 72-421
Cow position: chrX:13447965-13448333 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 245
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 43, 17

Conread position: 72-579
Cow position: chrX:13912774-13913307 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 26

Conread position: 73-357
Cow position: chrX:1331628-1331936 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 211
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 16

Conread position: 73-377
Cow position: chrX:2362195-2362519 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 221
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 42, 16

Conread position: 74-282
Cow position: chrX:29049672-29049883 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 168
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 41, 18

Conread position: 74-331
Cow position: chrX:29913036-29913312 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 46, 15

Conread position: 74-331
Cow position: chrX:42855108-42855383 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 17

Conread position: 74-332
Cow position: chrX:2786849-2786589 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 39, 15

Conread position: 74-334
Cow position: chrX:31260934-31260656 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 201
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 41, 15

Conread position: 74-337
Cow position: chrX:30021401-30021119 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 191
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 15

Conread position: 74-337
Cow position: chrX:42591422-42591704 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 194
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 15

Conread position: 74-337
Cow position: chrX:45658383-45658106 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 194
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 12

Conread position: 74-341
Cow position: chrX:2160462-2160748 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 199
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 15

Conread position: 74-341
Cow position: chrX:2559263-2558981 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 200
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 41, 15

Conread position: 74-341
Cow position: chrX:4622257-4621971 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 197
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 15

Conread position: 74-341
Cow position: chrX:8641485-8641770 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 198
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 15

Conread position: 74-341
Cow position: chrX:10932369-10932655 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 202
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 15

Conread position: 74-341
Cow position: chrX:12776289-12776004 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 15

Conread position: 74-341
Cow position: chrX:13385104-13385390 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 15

Conread position: 74-341
Cow position: chrX:14463010-14463296 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 41, 15

Conread position: 74-341
Cow position: chrX:15259922-15259636 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 194
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 46, 15

Conread position: 74-341
Cow position: chrX:15590175-15589892 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 191
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 15

Conread position: 74-341
Cow position: chrX:16285906-16286192 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 198
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 36, 15

Conread position: 74-341
Cow position: chrX:18024736-18025022 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 195
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 15

Conread position: 74-341
Cow position: chrX:20029944-20030235 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 200
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 15

Conread position: 74-341
Cow position: chrX:20617100-20616814 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 197
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 15

Conread position: 74-341
Cow position: chrX:21768501-21768786 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 41, 15

Conread position: 74-341
Cow position: chrX:23986942-23987227 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 192
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 37, 18

Conread position: 74-341
Cow position: chrX:25741417-25741131 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 15

Conread position: 74-341
Cow position: chrX:26974607-26974893 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 41, 15

Conread position: 74-341
Cow position: chrX:27422584-27422299 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 197
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 15

Conread position: 74-341
Cow position: chrX:29048729-29048999 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 188
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 42, 15

Conread position: 74-341
Cow position: chrX:43511117-43511402 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 15

Conread position: 74-341
Cow position: chrX:46297357-46297643 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 198
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 15

Conread position: 74-348
Cow position: chrX:38439170-38439463 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 15

Conread position: 74-351
Cow position: chrX:7054038-7053742 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 203
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 41, 18

Conread position: 74-351
Cow position: chrX:41743610-41743900 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 221
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 31, 15

Conread position: 74-355
Cow position: chrX:21255734-21256022 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 198
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 15

Conread position: 74-362
Cow position: chrX:11358368-11358061 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 208
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 15

Conread position: 74-362
Cow position: chrX:35803511-35803818 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 208
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 15

Conread position: 74-362
Cow position: chrX:36195789-36196096 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 208
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 41, 15

Conread position: 74-369
Cow position: chrX:30981468-30981155 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 215
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 15

Conread position: 74-376
Cow position: chrX:7509834-7510155 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 217
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 41, 15

Conread position: 74-376
Cow position: chrX:24758000-24757678 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 221
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 36, 15

Conread position: 74-377
Cow position: chrX:1576566-1576243 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 221
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:1975900-1975578 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 218
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:3078890-3078568 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 217
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:3157315-3157638 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 220
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 46, 18

Conread position: 74-377
Cow position: chrX:3658357-3658034 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 217
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:5334122-5333802 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 211
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 15

Conread position: 74-377
Cow position: chrX:5423369-5423046 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 221
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:5599281-5598958 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 225
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:5646407-5646084 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 218
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:5866843-5867165 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 221
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 36, 15

Conread position: 74-377
Cow position: chrX:6196057-6195734 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 221
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:7311690-7312012 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 216
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 15

Conread position: 74-377
Cow position: chrX:9018606-9018283 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 218
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:9128753-9129076 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 219
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 17

Conread position: 74-377
Cow position: chrX:10351558-10351880 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 218
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:10922874-10922551 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 220
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:11860545-11860222 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 219
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:12032668-12032991 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 219
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:12360586-12360909 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 219
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 15

Conread position: 74-377
Cow position: chrX:12850829-12851152 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 215
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:13070904-13070582 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 216
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 10

Conread position: 74-377
Cow position: chrX:14458470-14458154 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 214
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:15008735-15008414 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 218
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:15781278-15781601 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 218
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:16735221-16735544 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 220
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 15

Conread position: 74-377
Cow position: chrX:18451382-18451071 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 212
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 15

Conread position: 74-377
Cow position: chrX:19109344-19109021 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 220
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:19495263-19494940 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 219
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:19774783-19774460 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 218
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:20099019-20099342 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 220
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:22557198-22557521 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 217
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:22608895-22608572 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 218
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:23235527-23235850 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 217
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 18

Conread position: 74-377
Cow position: chrX:24966966-24967289 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 220
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:25288982-25288659 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 220
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 46, 15

Conread position: 74-377
Cow position: chrX:27469957-27469634 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 217
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:28555738-28555415 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 217
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:29169637-29169314 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 219
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:30538455-30538132 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 217
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:30752471-30752794 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 215
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:30822281-30822604 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 216
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 15

Conread position: 74-377
Cow position: chrX:30837070-30837383 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 211
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 18

Conread position: 74-377
Cow position: chrX:32039146-32038823 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 218
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:34095258-34095581 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 220
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:34285367-34285043 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 220
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 46, 15

Conread position: 74-377
Cow position: chrX:36479629-36479952 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 219
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:36730081-36730406 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 218
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:36820535-36820212 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 216
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:37061094-37060771 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 218
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:37497750-37497427 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 220
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:37772737-37772413 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 215
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 46, 15

Conread position: 74-377
Cow position: chrX:37958194-37958517 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 219
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:39667496-39667173 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 216
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:39731210-39731533 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 219
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:44168612-44168289 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 221
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 15

Conread position: 74-377
Cow position: chrX:48165220-48165543 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 222
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 41, 15

Conread position: 74-377
Cow position: chrX:48328690-48328367 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 218
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 15

Conread position: 74-378
Cow position: chrX:24969119-24968795 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 218
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 15

Conread position: 74-392
Cow position: chrX:1781602-1781941 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 226
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 15

Conread position: 74-392
Cow position: chrX:2664706-2665044 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 228
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 15

Conread position: 74-392
Cow position: chrX:3387803-3388141 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 228
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 41, 15

Conread position: 74-392
Cow position: chrX:30899691-30899352 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 227
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 27, 15

Conread position: 74-399
Cow position: chrX:5406755-5407097 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 229
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 15

Conread position: 74-399
Cow position: chrX:15504988-15505333 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 232
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 15

Conread position: 74-399
Cow position: chrX:30940878-30941225 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 229
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 15

Conread position: 74-400
Cow position: chrX:2274614-2274960 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 235
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 46, 15

Conread position: 74-400
Cow position: chrX:4343446-4343792 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 229
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 46, 15

Conread position: 74-400
Cow position: chrX:7755598-7755944 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 236
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 41, 15

Conread position: 74-400
Cow position: chrX:17995156-17995502 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 232
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 15

Conread position: 74-400
Cow position: chrX:18223110-18223451 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 228
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 15

Conread position: 74-400
Cow position: chrX:18462278-18461933 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 233
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 41, 15

Conread position: 74-400
Cow position: chrX:27594483-27594139 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 235
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 41, 15

Conread position: 74-400
Cow position: chrX:27759404-27759750 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 228
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 15

Conread position: 74-400
Cow position: chrX:29508480-29508820 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 225
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 15

Conread position: 74-400
Cow position: chrX:30196994-30197340 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 232
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 15

Conread position: 74-400
Cow position: chrX:30816572-30816226 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 226
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 15

Conread position: 74-400
Cow position: chrX:34333503-34333157 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 234
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 41, 15

Conread position: 74-400
Cow position: chrX:34519423-34519768 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 229
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 15

Conread position: 74-400
Cow position: chrX:47608111-47608456 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 234
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 41, 17

Conread position: 74-401
Cow position: chrX:10495930-10496285 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 238
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 15

Conread position: 74-401
Cow position: chrX:29226173-29226524 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 236
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 36, 15

Conread position: 74-406
Cow position: chrX:12145792-12146150 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 245
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 41, 15

Conread position: 74-406
Cow position: chrX:25276802-25276443 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 242
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 15

Conread position: 74-411
Cow position: chrX:9085636-9085272 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 241
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 41, 15

Conread position: 74-411
Cow position: chrX:27404248-27403884 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 246
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 15

Conread position: 74-414
Cow position: chrX:6558547-6558906 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 246
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 15

Conread position: 74-414
Cow position: chrX:6566771-6567130 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 243
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 46, 15

Conread position: 74-414
Cow position: chrX:11663875-11664234 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 242
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 46, 15

Conread position: 74-414
Cow position: chrX:13196274-13195915 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 239
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 15

Conread position: 74-414
Cow position: chrX:19473464-19473104 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 239
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 15

Conread position: 74-414
Cow position: chrX:23109459-23109813 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 238
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 15

Conread position: 74-417
Cow position: chrX:19022612-19022241 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 246
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 15

Conread position: 74-418
Cow position: chrX:11672478-11672842 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 240
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 15

Conread position: 74-418
Cow position: chrX:13396555-13396192 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 239
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 15

Conread position: 74-418
Cow position: chrX:15172830-15172472 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 239
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 15

Conread position: 74-418
Cow position: chrX:23140010-23140370 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 240
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 51, 15

Conread position: 74-418
Cow position: chrX:29356284-29356648 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 239
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 15

Conread position: 74-418
Cow position: chrX:29844779-29844416 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 239
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 15

Conread position: 74-421
Cow position: chrX:361756-361390 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 238
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 15

Conread position: 74-421
Cow position: chrX:2417787-2417421 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 246
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 41, 15

Conread position: 74-421
Cow position: chrX:12001450-12001084 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 240
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 15

Conread position: 74-421
Cow position: chrX:23047477-23047841 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 237
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 15

Conread position: 74-421
Cow position: chrX:24509564-24509930 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 247
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 15

Conread position: 74-421
Cow position: chrX:28058098-28057732 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 243
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 41, 15

Conread position: 74-421
Cow position: chrX:31605381-31605747 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 243
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 15

Conread position: 74-421
Cow position: chrX:33764041-33764407 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 239
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 41, 15

Conread position: 74-421
Cow position: chrX:38442659-38443025 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 245
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 15

Conread position: 74-421
Cow position: chrX:41488468-41488103 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 239
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 15

Conread position: 74-428
Cow position: chrX:24105323-24105702 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 270
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 41, 15

Conread position: 74-481
Cow position: chrX:42470240-42469810 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 18

Conread position: 74-482
Cow position: chrX:36778102-36778530 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 288
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 41, 15

Conread position: 74-490
Cow position: chrX:41733490-41733059 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 282
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 15

Conread position: 74-509
Cow position: chrX:14599230-14599691 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 12

Conread position: 74-509
Cow position: chrX:35388210-35387769 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 12

Conread position: 74-509
Cow position: chrX:40481175-40480706 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 15

Conread position: 74-561
Cow position: chrX:47343989-47344513 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 226

Conread position: 74-570
Cow position: chrX:31489209-31489744 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 18

Conread position: 74-579
Cow position: chrX:5638471-5637947 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 15

Conread position: 74-580
Cow position: chrX:3654305-3654836 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 15

Conread position: 74-581
Cow position: chrX:44192744-44192208 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 353
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 41, 15

Conread position: 74-584
Cow position: chrX:38963808-38964334 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 15

Conread position: 74-584
Cow position: chrX:43114870-43115386 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 18

Conread position: 74-585
Cow position: chrX:13177760-13177246 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 18

Conread position: 75-341
Cow position: chrX:23264739-23264454 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 196
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 40, 14

Conread position: 76-586
Cow position: chrX:30338220-30337716 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 16

Conread position: 77-285
Cow position: chrX:2524030-2523803 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 178
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 43, 15

Conread position: 77-342
Cow position: chrX:160332-160053 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 202
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 38, 15

Conread position: 77-342
Cow position: chrX:17271589-17271307 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 200
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 38, 12

Conread position: 77-346
Cow position: chrX:33020186-33020467 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 12

Conread position: 77-347
Cow position: chrX:20376670-20376952 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 198
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 38, 12

Conread position: 77-351
Cow position: chrX:1055693-1055406 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 208
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 16, 169

Conread position: 77-357
Cow position: chrX:48247133-48246855 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 27, 12

Conread position: 77-370
Cow position: chrX:25232286-25232596 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 222
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 38, 15

Conread position: 77-400
Cow position: chrX:8483788-8484119 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 227
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 43, 12

Conread position: 77-400
Cow position: chrX:42121003-42121346 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 233
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 15

Conread position: 77-459
Cow position: chrX:48243752-48243366 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 269
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 12

Conread position: 77-508
Cow position: chrX:10302044-10302498 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 299
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 80, 12

Conread position: 77-514
Cow position: chrX:45414600-45414143 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 15

Conread position: 77-527
Cow position: chrX:32171182-32170712 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 322
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 31, 12

Conread position: 77-537
Cow position: chrX:34502623-34503118 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 12

Conread position: 77-570
Cow position: chrX:26492702-26493230 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 12

Conread position: 77-575
Cow position: chrX:6234735-6234257 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 338
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 12

Conread position: 77-577
Cow position: chrX:31729158-31729667 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 12

Conread position: 77-577
Cow position: chrX:31949231-31948704 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 12

Conread position: 78-245
Cow position: chrX:22325776-22325955 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 37, 13

Conread position: 78-259
Cow position: chrX:45420974-45420776 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 11

Conread position: 78-291
Cow position: chrX:18293637-18293858 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 14

Conread position: 78-293
Cow position: chrX:48224485-48224254 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 14

Conread position: 78-312
Cow position: chrX:32978556-32978308 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 192
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 37, 14

Conread position: 78-341
Cow position: chrX:16711654-16711937 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 191
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 78-341
Cow position: chrX:26759868-26759586 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 199
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 37, 11

Conread position: 78-341
Cow position: chrX:31978144-31977863 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 196
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 11

Conread position: 78-342
Cow position: chrX:38967353-38967627 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 11

Conread position: 78-347
Cow position: chrX:14908717-14909000 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 197
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 14

Conread position: 78-370
Cow position: chrX:47967301-47967607 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 217
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 37, 11

Conread position: 78-377
Cow position: chrX:10444714-10444394 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 218
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 42, 11

Conread position: 78-401
Cow position: chrX:14221784-14222124 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 220
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 14

Conread position: 78-481
Cow position: chrX:917669-917237 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 14

Conread position: 78-569
Cow position: chrX:34532232-34532733 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 14

Conread position: 78-570
Cow position: chrX:1176273-1175767 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 344
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 30, 11

Conread position: 78-577
Cow position: chrX:31250092-31250620 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 11

Conread position: 79-342
Cow position: chrX:28157187-28157477 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 207
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 13

Conread position: 79-355
Cow position: chrX:25966759-25967027 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 195
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 13

Conread position: 79-401
Cow position: chrX:19015144-19015485 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 10

Conread position: 79-577
Cow position: chrX:41238661-41238132 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 10

Conread position: 80-256
Cow position: chrX:10916457-10916639 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 9

Conread position: 80-377
Cow position: chrX:35497789-35498106 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 215
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 35, 9

Conread position: 81-248
Cow position: chrX:26506235-26506064 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 8

Conread position: 81-287
Cow position: chrX:37299300-37299525 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 34, 11

Conread position: 81-341
Cow position: chrX:4869247-4869526 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 194
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 39, 8

Conread position: 82-256
Cow position: chrX:24102684-24102868 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 33, 7

Conread position: 82-275
Cow position: chrX:46448125-46447916 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 6, 0

Conread position: 82-340
Cow position: chrX:32584108-32583831 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 33, 7

Conread position: 82-341
Cow position: chrX:2945163-2944885 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 7

Conread position: 82-341
Cow position: chrX:3417434-3417157 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 7

Conread position: 82-341
Cow position: chrX:18194618-18194894 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 38, 7

Conread position: 82-341
Cow position: chrX:19290477-19290741 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 197
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 33, 7

Conread position: 82-341
Cow position: chrX:22538249-22537968 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 198
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 33, 10

Conread position: 82-341
Cow position: chrX:30823221-30823499 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 190
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 7

Conread position: 82-341
Cow position: chrX:31202545-31202823 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 191
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 7

Conread position: 82-351
Cow position: chrX:23299659-23299947 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 201
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 27, 7

Conread position: 82-368
Cow position: chrX:23451466-23451162 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 212
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 7

Conread position: 87-332
Cow position: chrX:25237887-25238142 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 196
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 28, 66

Conread position: 87-341
Cow position: chrX:2425413-2425139 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 187
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 87-341
Cow position: chrX:16703379-16703653 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 185
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 87-341
Cow position: chrX:22772364-22772638 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 191
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 87-341
Cow position: chrX:23386830-23386564 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 181
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 106

Conread position: 87-341
Cow position: chrX:24587745-24587471 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 187
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 87-341
Cow position: chrX:25452258-25452525 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 179
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 87-370
Cow position: chrX:23396315-23396609 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 196
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 106

Conread position: 87-377
Cow position: chrX:24577856-24577545 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 207
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 87-411
Cow position: chrX:35041931-35042276 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 236
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 28, 0

Conread position: 87-581
Cow position: chrX:30133615-30133090 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 28

Conread position: 87-586
Cow position: chrX:34454378-34454898 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 149

Conread position: 88-280
Cow position: chrX:39347076-39346865 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 88-350
Cow position: chrX:16722092-16721817 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 194
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 27, 160

Conread position: 88-370
Cow position: chrX:44835106-44834805 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 215
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 32, 268

Conread position: 88-377
Cow position: chrX:24903794-24904104 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 207
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 88-404
Cow position: chrX:14819422-14819761 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 233
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 297

Conread position: 88-576
Cow position: chrX:754668-755172 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 362

Conread position: 88-586
Cow position: chrX:4269357-4268831 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 61

Conread position: 89-581
Cow position: chrX:22482978-22482454 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 289

Conread position: 90-392
Cow position: chrX:20021275-20021598 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 215
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 291

Conread position: 90-464
Cow position: chrX:46723029-46722620 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 279
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 25, 0

Conread position: 92-347
Cow position: chrX:48195327-48195053 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 191
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 92-556
Cow position: chrX:31294826-31294360 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 138

Conread position: 92-565
Cow position: chrX:46033004-46032510 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 92

Conread position: 94-341
Cow position: chrX:38102728-38102464 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 179
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 21, 209

Conread position: 95-256
Cow position: chrX:13923144-13923312 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 92

Conread position: 95-443
Cow position: chrX:2467597-2467977 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 273
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 20, 257

Conread position: 96-586
Cow position: chrX:16762490-16763006 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 133

Conread position: 97-410
Cow position: chrX:42874697-42875040 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 97-509
Cow position: chrX:37836308-37836735 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 298
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 18, 334

Conread position: 98-337
Cow position: chrX:9997611-9997361 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 194
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 18, 75

Conread position: 98-563
Cow position: chrX:8730799-8731310 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 405

Conread position: 98-565
Cow position: chrX:34554450-34554942 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 142

Conread position: 100-481
Cow position: chrX:43567669-43568050 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 271
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 76, 42

Conread position: 100-582
Cow position: chrX:8925428-8925915 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 144

Conread position: 101-325
Cow position: chrX:2206817-2206588 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 181
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 13, 154

Conread position: 101-401
Cow position: chrX:15139815-15139499 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 223
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 32, 14

Conread position: 103-347
Cow position: chrX:7496974-7497224 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 193
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 27, 12

Conread position: 105-330
Cow position: chrX:28111238-28111474 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 17, 0

Conread position: 105-370
Cow position: chrX:8558732-8558453 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 196
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 31, 200

Conread position: 109-337
Cow position: chrX:29066179-29066416 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 34

Conread position: 109-579
Cow position: chrX:22074536-22075027 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 220

Conread position: 110-494
Cow position: chrX:6278769-6278354 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 382

Conread position: 114-287
Cow position: chrX:45465986-45466166 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 115-342
Cow position: chrX:19930400-19930630 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 61, 25

Conread position: 117-313
Cow position: chrX:46382035-46381826 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 140

Conread position: 117-400
Cow position: chrX:15037996-15037701 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 202
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 54, 18

Conread position: 117-585
Cow position: chrX:9635436-9634954 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 180

Conread position: 118-340
Cow position: chrX:20752009-20752232 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 59, 117

Conread position: 119-292
Cow position: chrX:13429535-13429353 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 119-343
Cow position: chrX:33827275-33827037 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 120-286
Cow position: chrX:6607169-6607346 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 120-342
Cow position: chrX:25411588-25411820 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 178
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 120-348
Cow position: chrX:38840635-38840874 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 11, 189

Conread position: 120-363
Cow position: chrX:47757181-47756926 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 185
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 56, 199

Conread position: 120-370
Cow position: chrX:8517624-8517875 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 56, 167

Conread position: 120-386
Cow position: chrX:30833090-30832819 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 204
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 67, 49

Conread position: 120-395
Cow position: chrX:32128232-32127950 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 49, 103

Conread position: 120-459
Cow position: chrX:27680151-27680507 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 120

Conread position: 120-490
Cow position: chrX:17631056-17630661 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 269
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 16, 179

Conread position: 120-490
Cow position: chrX:33493523-33493916 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 176

Conread position: 120-506
Cow position: chrX:24259830-24259425 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 263
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 51, 182

Conread position: 120-576
Cow position: chrX:7721731-7722203 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 24

Conread position: 120-586
Cow position: chrX:39938766-39938299 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 9

Conread position: 122-351
Cow position: chrX:10095777-10096018 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 21

Conread position: 122-581
Cow position: chrX:25816147-25815665 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 115

Conread position: 122-582
Cow position: chrX:24366080-24365587 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 31

Conread position: 123-341
Cow position: chrX:37416325-37416094 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 123-480
Cow position: chrX:19689968-19690345 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 267
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 18, 10

Conread position: 123-581
Cow position: chrX:40183600-40183120 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 253

Conread position: 123-585
Cow position: chrX:27206566-27207033 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 55

Conread position: 124-336
Cow position: chrX:24234726-24234502 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 124-351
Cow position: chrX:40647729-40647974 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 192
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 9, 0

Conread position: 125-570
Cow position: chrX:46532757-46532267 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 126-315
Cow position: chrX:6639878-6640082 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 161
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 44, 0

Conread position: 126-351
Cow position: chrX:10373061-10373303 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 189

Conread position: 126-378
Cow position: chrX:45566385-45566650 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 14

Conread position: 126-434
Cow position: chrX:2383243-2383554 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 220
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 46, 231

Conread position: 126-570
Cow position: chrX:42011034-42011484 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 308
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 43, 147

Conread position: 127-506
Cow position: chrX:9416938-9416526 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 285
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 44, 0

Conread position: 127-533
Cow position: chrX:40788958-40789382 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 291
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 17, 176

Conread position: 128-280
Cow position: chrX:16531757-16531914 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 40, 12

Conread position: 128-484
Cow position: chrX:47481556-47481930 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 16

Conread position: 128-570
Cow position: chrX:27509262-27508801 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 14

Conread position: 128-581
Cow position: chrX:35413388-35413828 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 111

Conread position: 129-483
Cow position: chrX:39558591-39558216 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 131

Conread position: 129-506
Cow position: chrX:27772199-27771812 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 67

Conread position: 129-585
Cow position: chrX:23514261-23513765 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 479

Conread position: 130-417
Cow position: chrX:26876123-26875817 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 53

Conread position: 130-463
Cow position: chrX:7508897-7509252 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 77

Conread position: 130-546
Cow position: chrX:21672309-21672761 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 365

Conread position: 130-577
Cow position: chrX:42492752-42492291 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 184

Conread position: 131-347
Cow position: chrX:13323241-13323013 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 32, 125

Conread position: 131-464
Cow position: chrX:11856188-11856544 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 254
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 45, 195

Conread position: 131-514
Cow position: chrX:17662838-17662433 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 132-341
Cow position: chrX:2963810-2964032 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 170

Conread position: 132-566
Cow position: chrX:20151610-20152067 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 99

Conread position: 132-577
Cow position: chrX:21663069-21663525 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 302
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 44, 120

Conread position: 135-259
Cow position: chrX:5856560-5856430 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 135-332
Cow position: chrX:40116188-40116390 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 42, 0

Conread position: 135-350
Cow position: chrX:44053021-44053246 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 135-351
Cow position: chrX:42282199-42282417 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 42, 108

Conread position: 135-363
Cow position: chrX:11561917-11562157 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 135-369
Cow position: chrX:9572286-9572533 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 40, 243

Conread position: 135-369
Cow position: chrX:9976199-9976446 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 40, 243

Conread position: 135-377
Cow position: chrX:19333406-19333149 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 173
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 135-377
Cow position: chrX:23827352-23827609 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 39, 243

Conread position: 135-377
Cow position: chrX:41414021-41413764 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 173
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 135-392
Cow position: chrX:33983843-33983571 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 180
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 135-400
Cow position: chrX:22815704-22815984 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 187
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 243

Conread position: 135-407
Cow position: chrX:41167201-41166908 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 211
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 31, 0

Conread position: 135-408
Cow position: chrX:46424989-46424702 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 241

Conread position: 135-411
Cow position: chrX:30245292-30244995 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 199
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 135-464
Cow position: chrX:45404071-45403711 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 248
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 42, 0

Conread position: 135-493
Cow position: chrX:11073428-11073049 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 169

Conread position: 135-495
Cow position: chrX:678805-678430 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 271
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 41, 194

Conread position: 135-506
Cow position: chrX:17541727-17542116 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 271
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 34, 118

Conread position: 135-509
Cow position: chrX:6690485-6690103 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 104

Conread position: 135-560
Cow position: chrX:28878399-28877953 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 92

Conread position: 135-562
Cow position: chrX:4768513-4768943 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 89

Conread position: 135-578
Cow position: chrX:45598841-45598377 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 135-581
Cow position: chrX:9360646-9361116 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 311
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 41, 81

Conread position: 135-581
Cow position: chrX:11939161-11938719 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 99

Conread position: 135-584
Cow position: chrX:27432156-27431687 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 432

Conread position: 135-586
Cow position: chrX:20677128-20677602 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 17

Conread position: 135-586
Cow position: chrX:32020359-32019894 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 225

Conread position: 136-244
Cow position: chrX:48578179-48578293 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 136-255
Cow position: chrX:33519381-33519510 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 109
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 136-280
Cow position: chrX:44908086-44908236 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 40, 103

Conread position: 136-332
Cow position: chrX:7425228-7425438 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 176

Conread position: 136-339
Cow position: chrX:4942987-4942780 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 164
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 8, 91

Conread position: 136-341
Cow position: chrX:46044808-46045024 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 195

Conread position: 136-342
Cow position: chrX:39700991-39701202 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 168

Conread position: 136-345
Cow position: chrX:1105040-1104817 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 136-351
Cow position: chrX:39071461-39071683 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 59

Conread position: 136-351
Cow position: chrX:40540378-40540153 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 183

Conread position: 136-363
Cow position: chrX:31571159-31571378 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 40, 91

Conread position: 136-392
Cow position: chrX:23970153-23970418 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 198
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 33, 102

Conread position: 136-406
Cow position: chrX:9953905-9954192 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 42, 201

Conread position: 136-407
Cow position: chrX:9855064-9855352 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 201
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 34, 201

Conread position: 136-464
Cow position: chrX:24132387-24132037 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 238
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 40, 328

Conread position: 136-465
Cow position: chrX:26625913-26625556 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 266
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 42, 186

Conread position: 136-466
Cow position: chrX:21004448-21004800 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 248
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 24, 194

Conread position: 136-471
Cow position: chrX:42499265-42498927 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 244
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 40, 172

Conread position: 136-478
Cow position: chrX:11455288-11454921 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 259
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 28, 98

Conread position: 136-478
Cow position: chrX:43049106-43049458 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 255
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 28, 288

Conread position: 136-481
Cow position: chrX:1514640-1514288 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 105

Conread position: 136-490
Cow position: chrX:36840637-36841003 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 248
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 34, 138

Conread position: 136-498
Cow position: chrX:40692974-40692604 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 253
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 40, 73

Conread position: 136-506
Cow position: chrX:41884654-41884256 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 136-509
Cow position: chrX:619244-618849 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 331

Conread position: 136-512
Cow position: chrX:6563276-6563685 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 278
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 40, 62

Conread position: 136-523
Cow position: chrX:2029154-2029559 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 272
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 33, 153

Conread position: 136-530
Cow position: chrX:16416272-16416686 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 295
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 40, 169

Conread position: 136-564
Cow position: chrX:34543551-34544003 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 71

Conread position: 136-576
Cow position: chrX:38549212-38549676 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 118

Conread position: 136-577
Cow position: chrX:38935045-38935509 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 318
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 40, 154

Conread position: 136-581
Cow position: chrX:47249024-47248564 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 142

Conread position: 136-583
Cow position: chrX:44961511-44961990 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 118

Conread position: 136-584
Cow position: chrX:33855469-33854990 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 160

Conread position: 137-330
Cow position: chrX:877258-877061 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 32, 133

Conread position: 137-530
Cow position: chrX:32623348-32623753 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 278
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 39, 13

Conread position: 138-339
Cow position: chrX:25571230-25571020 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 169

Conread position: 138-400
Cow position: chrX:22915232-22915509 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 185
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 36, 240

Conread position: 138-465
Cow position: chrX:15814863-15815198 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 248
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 86

Conread position: 138-475
Cow position: chrX:16284181-16283818 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 248
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 183

Conread position: 138-502
Cow position: chrX:7513282-7513636 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 193

Conread position: 138-506
Cow position: chrX:33639737-33640131 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 273
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 35, 172

Conread position: 138-570
Cow position: chrX:38642026-38642465 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 183

Conread position: 139-351
Cow position: chrX:19841891-19841671 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 180

Conread position: 139-575
Cow position: chrX:9201314-9201771 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 379

Conread position: 139-581
Cow position: chrX:17231501-17231971 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 115

Conread position: 139-581
Cow position: chrX:36975716-36976182 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 191

Conread position: 140-291
Cow position: chrX:45787422-45787578 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 114

Conread position: 140-325
Cow position: chrX:42339168-42338980 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 152
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 36, 113

Conread position: 140-331
Cow position: chrX:27176552-27176344 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 140-351
Cow position: chrX:41198872-41199093 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 113

Conread position: 140-509
Cow position: chrX:13382092-13382484 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 291

Conread position: 140-509
Cow position: chrX:27394246-27393867 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 124

Conread position: 140-521
Cow position: chrX:45174612-45175022 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 171

Conread position: 140-561
Cow position: chrX:37119367-37119789 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 298
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 36, 78

Conread position: 140-566
Cow position: chrX:27514636-27515078 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 303
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 36, 194

Conread position: 140-570
Cow position: chrX:30421171-30420744 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 303
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 32, 196

Conread position: 140-581
Cow position: chrX:23497895-23497463 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 117

Conread position: 140-581
Cow position: chrX:30963104-30962641 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 102

Conread position: 140-581
Cow position: chrX:48010362-48010839 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 314
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 36, 354

Conread position: 141-347
Cow position: chrX:2648581-2648369 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 35, 28

Conread position: 141-394
Cow position: chrX:14900952-14900689 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 200
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 25, 144

Conread position: 141-474
Cow position: chrX:37910222-37910569 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 241
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 35, 14

Conread position: 141-497
Cow position: chrX:5900226-5900609 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 268
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 23, 296

Conread position: 141-556
Cow position: chrX:22821816-22822264 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 303
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 32, 149

Conread position: 141-584
Cow position: chrX:12980060-12979598 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 10

Conread position: 142-301
Cow position: chrX:48536895-48536724 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 137
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 142-369
Cow position: chrX:44870860-44870631 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 83

Conread position: 142-388
Cow position: chrX:37048811-37048546 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 192
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 32, 149

Conread position: 142-557
Cow position: chrX:35542661-35543094 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 206

Conread position: 142-569
Cow position: chrX:37489500-37489951 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 97

Conread position: 142-575
Cow position: chrX:42381330-42380884 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 113

Conread position: 143-307
Cow position: chrX:18812029-18812197 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 137
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 33, 26

Conread position: 143-347
Cow position: chrX:11746613-11746831 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 33, 26

Conread position: 143-375
Cow position: chrX:1728646-1728413 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 27, 145

Conread position: 143-399
Cow position: chrX:13265849-13265585 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 189
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 33, 114

Conread position: 143-417
Cow position: chrX:11589821-11589524 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 218
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 29, 82

Conread position: 143-509
Cow position: chrX:17725749-17726135 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 143-564
Cow position: chrX:30921956-30922389 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 301
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 20, 59

Conread position: 143-586
Cow position: chrX:10959631-10959177 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 318
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 24, 7

Conread position: 144-336
Cow position: chrX:4482734-4482941 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 69

Conread position: 144-341
Cow position: chrX:27994485-27994273 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 31, 109

Conread position: 144-401
Cow position: chrX:18195718-18195970 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 24, 31

Conread position: 144-562
Cow position: chrX:29545103-29544671 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 74

Conread position: 145-348
Cow position: chrX:48684450-48684239 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 94

Conread position: 146-470
Cow position: chrX:4865025-4865353 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 219
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 102

Conread position: 147-342
Cow position: chrX:29509669-29509462 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 163
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 25, 0

Conread position: 147-347
Cow position: chrX:20792043-20791834 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 29, 157

Conread position: 147-482
Cow position: chrX:9041454-9041112 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 229
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 22

Conread position: 147-581
Cow position: chrX:4750523-4750104 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 54

Conread position: 147-581
Cow position: chrX:21642703-21642247 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 22

Conread position: 147-586
Cow position: chrX:1465962-1466402 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 82

Conread position: 147-586
Cow position: chrX:28013665-28013203 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 311
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 29, 82

Conread position: 148-324
Cow position: chrX:16324187-16324003 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 28, 13

Conread position: 148-394
Cow position: chrX:34385105-34385366 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 148-500
Cow position: chrX:17042466-17042831 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 251
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 28, 163

Conread position: 148-581
Cow position: chrX:13191768-13191332 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 179

Conread position: 149-330
Cow position: chrX:16541899-16541704 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 149-337
Cow position: chrX:7336613-7336803 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 59, 28

Conread position: 149-567
Cow position: chrX:6488363-6488785 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 313
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 21, 86

Conread position: 151-481
Cow position: chrX:37574635-37574971 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 113

Conread position: 151-584
Cow position: chrX:48236590-48237056 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 320
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 25, 318

Conread position: 152-504
Cow position: chrX:23091661-23092027 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 122

Conread position: 152-576
Cow position: chrX:36283125-36283569 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 217

Conread position: 152-578
Cow position: chrX:29602053-29601598 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 106

Conread position: 152-579
Cow position: chrX:1503119-1503539 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 294
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 24, 17

Conread position: 152-582
Cow position: chrX:46073042-46072595 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 112

Conread position: 154-578
Cow position: chrX:11633460-11633913 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 155-351
Cow position: chrX:2186041-2186241 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 22, 133

Conread position: 155-488
Cow position: chrX:29120841-29121185 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 251
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 10, 82

Conread position: 155-580
Cow position: chrX:37781330-37780877 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 416

Conread position: 156-321
Cow position: chrX:29770391-29770215 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 156-407
Cow position: chrX:8070916-8070645 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 191
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 156-581
Cow position: chrX:40567383-40567839 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 302
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 20, 168

Conread position: 157-408
Cow position: chrX:20787604-20787866 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 181
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 19, 218

Conread position: 157-490
Cow position: chrX:39126123-39126466 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 230
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 20, 71

Conread position: 160-350
Cow position: chrX:46315589-46315390 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 156
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 13, 0

Conread position: 160-578
Cow position: chrX:1499461-1499885 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 75

Conread position: 161-342
Cow position: chrX:28836108-28835926 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 12, 19

Conread position: 161-586
Cow position: chrX:3579735-3580184 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 171

Conread position: 163-409
Cow position: chrX:37540921-37541174 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 187
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 24, 12

Conread position: 163-563
Cow position: chrX:10831702-10831265 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 310

Conread position: 163-580
Cow position: chrX:38852992-38853444 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 165

Conread position: 164-407
Cow position: chrX:36961432-36961695 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 198
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 24, 0

Conread position: 165-347
Cow position: chrX:7362053-7361878 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 22, 116

Conread position: 165-351
Cow position: chrX:23341169-23340978 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 21

Conread position: 165-351
Cow position: chrX:31340502-31340697 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 165-562
Cow position: chrX:32420016-32420426 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 233

Conread position: 165-586
Cow position: chrX:45110453-45110890 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 348

Conread position: 166-351
Cow position: chrX:8991686-8991873 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 83

Conread position: 169-543
Cow position: chrX:169722-169345 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 279
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 16, 7

Conread position: 169-577
Cow position: chrX:10252380-10251972 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 47

Conread position: 169-585
Cow position: chrX:34411642-34412086 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 170-336
Cow position: chrX:46430055-46429887 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 18, 158

Conread position: 170-348
Cow position: chrX:47453929-47454115 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 17, 79

Conread position: 170-351
Cow position: chrX:17908481-17908300 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 17, 89

Conread position: 170-393
Cow position: chrX:4091450-4091680 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 17, 66

Conread position: 170-412
Cow position: chrX:26285782-26286026 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 16, 129

Conread position: 170-464
Cow position: chrX:45148977-45149282 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 202
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 187

Conread position: 170-496
Cow position: chrX:45845898-45846247 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 246
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 17, 241

Conread position: 170-537
Cow position: chrX:47046717-47046323 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 271
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 17, 267

Conread position: 170-563
Cow position: chrX:43780050-43779649 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 286
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 17, 308

Conread position: 170-566
Cow position: chrX:9425939-9425543 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 281
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 17, 252

Conread position: 170-569
Cow position: chrX:841961-842378 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 286
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 17, 66

Conread position: 170-581
Cow position: chrX:4826025-4825614 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 282
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 17, 58

Conread position: 170-581
Cow position: chrX:33000706-33001132 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 99

Conread position: 170-581
Cow position: chrX:40035642-40035208 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 87

Conread position: 170-584
Cow position: chrX:29542416-29541991 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 292

Conread position: 170-586
Cow position: chrX:27174798-27175239 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 311

Conread position: 170-586
Cow position: chrX:46587620-46588061 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 318

Conread position: 172-538
Cow position: chrX:4515472-4515879 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 293
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 15, 311

Conread position: 172-575
Cow position: chrX:8869604-8869176 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 118

Conread position: 175-341
Cow position: chrX:45874806-45874977 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 176-509
Cow position: chrX:43730406-43730065 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 90

Conread position: 177-503
Cow position: chrX:31311835-31312182 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 152

Conread position: 181-484
Cow position: chrX:7161885-7162190 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 209
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 153, 49

Conread position: 182-586
Cow position: chrX:48044384-48043984 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 287
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 42, 150

Conread position: 183-537
Cow position: chrX:31252233-31252598 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 27

Conread position: 185-337
Cow position: chrX:24149458-24149615 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 186-351
Cow position: chrX:1505532-1505697 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 72, 15

Conread position: 186-359
Cow position: chrX:31256687-31256862 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 144
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 78, 62

Conread position: 186-443
Cow position: chrX:40809506-40809786 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 199
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 75, 216

Conread position: 186-467
Cow position: chrX:47362792-47362506 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 191
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 135

Conread position: 186-508
Cow position: chrX:36067839-36068177 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 50

Conread position: 186-509
Cow position: chrX:23785473-23785807 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 243
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 49, 164

Conread position: 186-570
Cow position: chrX:35383200-35382819 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 129

Conread position: 186-581
Cow position: chrX:7863751-7863345 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 268
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 53, 130

Conread position: 186-586
Cow position: chrX:32820849-32821276 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 9

Conread position: 187-362
Cow position: chrX:30005089-30005265 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 122
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 187-433
Cow position: chrX:13785537-13785280 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 37

Conread position: 187-452
Cow position: chrX:45993039-45993332 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 207
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 40, 79

Conread position: 188-347
Cow position: chrX:45759219-45759376 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 74, 42

Conread position: 188-581
Cow position: chrX:9770863-9770452 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 266
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 63, 230

Conread position: 188-581
Cow position: chrX:36060973-36061393 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 279
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 47, 291

Conread position: 189-578
Cow position: chrX:47186498-47186095 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 274
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 65, 133

Conread position: 190-577
Cow position: chrX:47484448-47484028 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 285
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 45, 296

Conread position: 191-375
Cow position: chrX:25568575-25568384 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 162

Conread position: 191-562
Cow position: chrX:4279290-4278904 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 261
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 71, 50

Conread position: 191-585
Cow position: chrX:27145447-27145836 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 148

Conread position: 192-347
Cow position: chrX:46146735-46146579 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 64, 91

Conread position: 193-586
Cow position: chrX:22387421-22387004 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 235

Conread position: 193-586
Cow position: chrX:35885903-35885491 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 287

Conread position: 194-351
Cow position: chrX:37750426-37750269 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 59

Conread position: 194-510
Cow position: chrX:46433310-46433648 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 238
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 41, 317

Conread position: 194-581
Cow position: chrX:6407376-6407779 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 291
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 51, 107

Conread position: 195-576
Cow position: chrX:4398954-4399347 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 120

Conread position: 195-584
Cow position: chrX:34792482-34792086 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 61

Conread position: 196-586
Cow position: chrX:14955938-14955527 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 280
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 57, 18

Conread position: 196-586
Cow position: chrX:25208017-25207622 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 151

Conread position: 198-348
Cow position: chrX:14003813-14003656 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 199-341
Cow position: chrX:10128837-10128987 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 200-570
Cow position: chrX:8917226-8917618 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 269
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 45, 285

Conread position: 201-552
Cow position: chrX:14275901-14275542 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 17

Conread position: 203-555
Cow position: chrX:41068564-41068928 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 257
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 70, 21

Conread position: 204-580
Cow position: chrX:45875239-45875624 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 270
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 78, 29

Conread position: 208-586
Cow position: chrX:36355957-36356343 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 103

Conread position: 209-489
Cow position: chrX:33590570-33590853 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 187
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 55, 94

Conread position: 209-563
Cow position: chrX:27227966-27228345 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 210-586
Cow position: chrX:35822184-35822568 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 271
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 31, 7

Conread position: 214-580
Cow position: chrX:21986445-21986068 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 197

Conread position: 217-509
Cow position: chrX:616412-616099 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 230
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 7, 0

Conread position: 217-586
Cow position: chrX:18204613-18204228 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 263
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 11, 348

Conread position: 218-509
Cow position: chrX:9365822-9365517 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 212
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 43, 21

Conread position: 218-509
Cow position: chrX:29680408-29680103 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 283

Conread position: 218-586
Cow position: chrX:20584170-20584551 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 294

Conread position: 221-586
Cow position: chrX:29723596-29723989 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 273
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 44, 272

Conread position: 222-509
Cow position: chrX:11085201-11084904 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 41, 122

Conread position: 222-576
Cow position: chrX:47280076-47279707 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 232
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 288

Conread position: 222-579
Cow position: chrX:34313889-34314253 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 42

Conread position: 223-493
Cow position: chrX:38066597-38066311 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 210
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 11, 92

Conread position: 226-586
Cow position: chrX:41870933-41871295 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 278

Conread position: 227-450
Cow position: chrX:27685108-27685349 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 228-581
Cow position: chrX:45976782-45977158 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 335

Conread position: 229-490
Cow position: chrX:37986096-37986365 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 199
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 32, 82

Conread position: 229-508
Cow position: chrX:7710680-7710380 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 233-584
Cow position: chrX:34837183-34836833 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 30

Conread position: 237-478
Cow position: chrX:19273852-19273579 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 209
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 19, 0

Conread position: 237-492
Cow position: chrX:48044641-48044376 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 182
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 244

Conread position: 237-505
Cow position: chrX:42873263-42873540 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 24, 173

Conread position: 237-508
Cow position: chrX:38728608-38728890 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 198
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 28, 240

Conread position: 237-580
Cow position: chrX:5919367-5919719 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 74

Conread position: 237-580
Cow position: chrX:40685460-40685096 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 239-577
Cow position: chrX:41027030-41027390 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 41

Conread position: 240-431
Cow position: chrX:19003174-19003374 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 21, 175

Conread position: 240-584
Cow position: chrX:34505173-34504816 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 71

Conread position: 243-581
Cow position: chrX:18111267-18111613 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 233
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 18, 44

Conread position: 244-581
Cow position: chrX:40320283-40320642 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 236
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 240

Conread position: 246-581
Cow position: chrX:26881688-26881328 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 310

Conread position: 248-501
Cow position: chrX:5679684-5679421 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 187
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 17, 84

Conread position: 250-586
Cow position: chrX:24331662-24332017 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 241
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 15, 0

Conread position: 262-587
Cow position: chrX:42855355-42855703 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 246
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 88, 15

Conread position: 264-509
Cow position: chrX:29194135-29194389 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 176
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 86, 48

Conread position: 264-560
Cow position: chrX:46291039-46291354 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 225
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 81, 228

Conread position: 264-570
Cow position: chrX:10516157-10516477 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 230
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 86, 44

Conread position: 264-585
Cow position: chrX:4403215-4403557 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 232
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 10, 0

Conread position: 264-586
Cow position: chrX:33539066-33539390 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 245
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 44, 232

Conread position: 264-586
Cow position: chrX:42927918-42927589 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 258

Conread position: 264-587
Cow position: chrX:29229911-29230247 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 82

Conread position: 265-483
Cow position: chrX:45670129-45670355 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 89, 14

Conread position: 265-541
Cow position: chrX:40283027-40283317 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 194
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 166

Conread position: 265-578
Cow position: chrX:19469597-19469285 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 23

Conread position: 266-570
Cow position: chrX:13923774-13924084 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 208
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 16, 71

Conread position: 267-481
Cow position: chrX:11851765-11851548 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 173
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 150, 86

Conread position: 267-576
Cow position: chrX:12095870-12095542 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 237
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 9, 214

Conread position: 267-584
Cow position: chrX:13146884-13147221 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 221
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 37, 194

Conread position: 268-577
Cow position: chrX:38560462-38560780 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 232
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 43, 234

Conread position: 268-581
Cow position: chrX:17949585-17949258 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 229
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 10, 209

Conread position: 268-581
Cow position: chrX:48071068-48071396 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 214
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 80, 10

Conread position: 269-570
Cow position: chrX:20168464-20168778 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 228
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 81, 224

Conread position: 269-579
Cow position: chrX:47345240-47345562 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 271-582
Cow position: chrX:33654933-33654608 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 221
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 42, 0

Conread position: 272-566
Cow position: chrX:27261097-27261409 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 225
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 32, 37

Conread position: 272-575
Cow position: chrX:918818-918501 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 238
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 78, 181

Conread position: 272-576
Cow position: chrX:44040109-44040406 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 215
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 204, 50

Conread position: 272-581
Cow position: chrX:4296912-4296590 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 219
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 9, 0

Conread position: 272-588
Cow position: chrX:29050156-29050486 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 237

Conread position: 273-586
Cow position: chrX:7648491-7648174 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 208
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 79, 298

Conread position: 280-575
Cow position: chrX:40680528-40680843 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 220
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 73, 0

Conread position: 280-576
Cow position: chrX:16575040-16575335 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 213
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 69, 79

Conread position: 280-576
Cow position: chrX:25464179-25463883 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 196
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 135, 28

Conread position: 280-577
Cow position: chrX:8492998-8493296 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 201
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 139, 16

Conread position: 281-508
Cow position: chrX:18273140-18272901 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 62, 208

Conread position: 281-577
Cow position: chrX:6559527-6559225 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 213
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 74, 169

Conread position: 281-579
Cow position: chrX:4153117-4152812 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 230

Conread position: 283-579
Cow position: chrX:36866091-36866404 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 218
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 72, 189

Conread position: 284-503
Cow position: chrX:5135604-5135367 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 179
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 77, 215

Conread position: 284-506
Cow position: chrX:23562556-23562788 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 66, 41

Conread position: 284-570
Cow position: chrX:39220001-39220311 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 217
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 66, 35

Conread position: 286-509
Cow position: chrX:11318044-11317811 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 66, 190

Conread position: 290-578
Cow position: chrX:47650277-47650003 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 205
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 27, 149

Conread position: 290-585
Cow position: chrX:1088209-1087910 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 225

Conread position: 297-482
Cow position: chrX:12082391-12082192 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 298-511
Cow position: chrX:25788961-25788744 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 299-543
Cow position: chrX:41862322-41862556 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 186
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 120, 53

Conread position: 300-578
Cow position: chrX:296332-296623 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 204
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 57, 102

Conread position: 300-581
Cow position: chrX:40574989-40574709 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 191
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 112, 21

Conread position: 300-584
Cow position: chrX:25036924-25037229 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 206
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 301-575
Cow position: chrX:23561799-23562101 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 210
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 301-578
Cow position: chrX:4109128-4109416 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 194
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 302-575
Cow position: chrX:5134414-5134702 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 210
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 50, 82

Conread position: 303-554
Cow position: chrX:27511367-27511628 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 179
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 217

Conread position: 305-563
Cow position: chrX:1360028-1360298 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 59, 178

Conread position: 308-490
Cow position: chrX:46429875-46429679 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 156
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 46, 13

Conread position: 308-509
Cow position: chrX:32978132-32977929 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 158
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 42, 111

Conread position: 308-564
Cow position: chrX:46022730-46022992 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 175
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 106, 161

Conread position: 311-490
Cow position: chrX:25328658-25328476 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 146
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 46, 78

Conread position: 311-586
Cow position: chrX:35985766-35986054 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 223
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 43, 116

Conread position: 313-579
Cow position: chrX:20957198-20957469 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 49

Conread position: 318-586
Cow position: chrX:2523723-2523461 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 207
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 33, 177

Conread position: 320-586
Cow position: chrX:11326143-11325870 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 155

Conread position: 321-586
Cow position: chrX:27306410-27306677 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 214
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 27, 180

Conread position: 322-586
Cow position: chrX:19394511-19394794 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 211
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 30, 0

Conread position: 323-586
Cow position: chrX:24749047-24749326 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 30, 0

Conread position: 325-479
Cow position: chrX:29585082-29585248 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 329-584
Cow position: chrX:28940212-28940481 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 9

Conread position: 334-583
Cow position: chrX:32208840-32208591 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 27

Conread position: 338-496
Cow position: chrX:44926443-44926603 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 28

Conread position: 344-586
Cow position: chrX:24054662-24054899 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 189
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 47, 153

Conread position: 346-575
Cow position: chrX:38321390-38321155 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 158
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 124

Conread position: 347-553
Cow position: chrX:23188786-23188583 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 66, 0

Conread position: 347-586
Cow position: chrX:41941619-41941862 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 68, 14

Conread position: 347-586
Cow position: chrX:42331273-42331510 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 173
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 13

Conread position: 347-587
Cow position: chrX:17956687-17956929 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 55, 81

Conread position: 348-570
Cow position: chrX:11653759-11653990 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 43, 0

Conread position: 348-576
Cow position: chrX:18964828-18964605 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 122, 57

Conread position: 350-582
Cow position: chrX:2935954-2936188 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 145

Conread position: 351-559
Cow position: chrX:24633682-24633909 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 177
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 68, 0

Conread position: 353-564
Cow position: chrX:42836180-42836398 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 15, 117

Conread position: 354-578
Cow position: chrX:42432513-42432283 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 48, 83

Conread position: 360-504
Cow position: chrX:29501874-29501730 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 53, 23

Conread position: 360-563
Cow position: chrX:45383038-45382845 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 60, 120

Conread position: 360-564
Cow position: chrX:47061403-47061603 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 51, 130

Conread position: 360-575
Cow position: chrX:12972688-12972906 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 172
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 24, 132

Conread position: 360-575
Cow position: chrX:22283845-22284067 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 150
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 360-578
Cow position: chrX:39290366-39290586 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 122

Conread position: 360-585
Cow position: chrX:6599775-6599536 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 360-585
Cow position: chrX:22392977-22392749 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 118

Conread position: 360-586
Cow position: chrX:26843262-26843028 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 59, 110

Conread position: 360-586
Cow position: chrX:29451535-29451304 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 117, 26

Conread position: 360-587
Cow position: chrX:32943069-32942840 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 59, 188

Conread position: 361-498
Cow position: chrX:4616003-4615864 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 118
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 14, 107

Conread position: 361-504
Cow position: chrX:40532035-40531889 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 121
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 58, 0

Conread position: 361-509
Cow position: chrX:36848570-36848420 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 113

Conread position: 361-562
Cow position: chrX:46070164-46069970 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 160
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 16, 135

Conread position: 361-581
Cow position: chrX:4466975-4467185 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 177
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 58, 128

Conread position: 361-584
Cow position: chrX:4289450-4289671 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 173
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 35, 138

Conread position: 361-585
Cow position: chrX:16984649-16984875 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 104

Conread position: 361-585
Cow position: chrX:42479841-42480065 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 177
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 57, 129

Conread position: 361-586
Cow position: chrX:27668950-27668724 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 172

Conread position: 363-504
Cow position: chrX:23266425-23266568 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 56, 104

Conread position: 363-555
Cow position: chrX:32574327-32574524 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 104

Conread position: 363-580
Cow position: chrX:38301819-38302047 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 55, 0

Conread position: 363-581
Cow position: chrX:38967898-38968130 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 23, 69

Conread position: 364-580
Cow position: chrX:29467767-29467549 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 50, 142

Conread position: 365-575
Cow position: chrX:16836274-16836066 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 0

Conread position: 365-575
Cow position: chrX:23335960-23335747 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 131, 48

Conread position: 365-576
Cow position: chrX:17966353-17966553 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 132

Conread position: 365-581
Cow position: chrX:45699959-45699746 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 37, 65

Conread position: 365-586
Cow position: chrX:4328171-4327943 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 54, 104

Conread position: 365-586
Cow position: chrX:13121950-13122182 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 44, 221

Conread position: 365-586
Cow position: chrX:26205436-26205219 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 50, 125

Conread position: 365-586
Cow position: chrX:35392282-35392066 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 366-562
Cow position: chrX:30824000-30824200 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 131

Conread position: 366-577
Cow position: chrX:43008622-43008840 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 104

Conread position: 366-586
Cow position: chrX:17292968-17293195 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 104

Conread position: 366-586
Cow position: chrX:24336064-24335838 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 154
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 215

Conread position: 367-491
Cow position: chrX:29553299-29553426 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 367-494
Cow position: chrX:19943220-19943092 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 67

Conread position: 367-560
Cow position: chrX:23113299-23113505 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 367-563
Cow position: chrX:30840554-30840757 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 25, 137

Conread position: 367-566
Cow position: chrX:4645899-4645695 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 122

Conread position: 367-570
Cow position: chrX:1122529-1122324 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 158
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 133, 46

Conread position: 367-570
Cow position: chrX:29478738-29478945 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 102

Conread position: 367-577
Cow position: chrX:4559753-4559964 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 129, 33

Conread position: 367-577
Cow position: chrX:35276000-35276216 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 52, 21

Conread position: 367-577
Cow position: chrX:42450000-42449783 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 52, 0

Conread position: 367-581
Cow position: chrX:16324000-16323781 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 123, 49

Conread position: 367-581
Cow position: chrX:24170715-24170491 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 44, 81

Conread position: 367-583
Cow position: chrX:32910118-32910332 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 52, 81

Conread position: 367-584
Cow position: chrX:17524370-17524146 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 53, 102

Conread position: 367-586
Cow position: chrX:19018817-19018589 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 367-586
Cow position: chrX:34420748-34420975 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 154
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 367-586
Cow position: chrX:42893938-42894161 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 24, 135

Conread position: 367-587
Cow position: chrX:3806696-3806918 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 48, 128

Conread position: 367-587
Cow position: chrX:43150441-43150673 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 159
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 28, 106

Conread position: 367-588
Cow position: chrX:38587829-38587605 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 52, 188

Conread position: 368-503
Cow position: chrX:42160641-42160776 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 368-569
Cow position: chrX:34315534-34315749 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 368-571
Cow position: chrX:45759693-45759893 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 161, 43

Conread position: 368-575
Cow position: chrX:11762986-11762783 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 51, 121

Conread position: 368-584
Cow position: chrX:907961-908177 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 50, 95

Conread position: 368-586
Cow position: chrX:35658814-35659033 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 102, 98

Conread position: 369-496
Cow position: chrX:41164630-41164757 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 110
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 369-509
Cow position: chrX:23498661-23498521 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 369-567
Cow position: chrX:47079643-47079847 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 49, 195

Conread position: 369-570
Cow position: chrX:27075035-27074828 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 50, 100

Conread position: 369-570
Cow position: chrX:48558762-48558969 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 44, 167

Conread position: 369-575
Cow position: chrX:31479987-31480194 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 369-577
Cow position: chrX:40108503-40108283 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 150
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 369-586
Cow position: chrX:20583682-20583899 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 178

Conread position: 369-588
Cow position: chrX:19356485-19356707 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 133, 64

Conread position: 370-570
Cow position: chrX:19761771-19761972 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 101

Conread position: 370-584
Cow position: chrX:20345470-20345688 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 40

Conread position: 370-585
Cow position: chrX:47854998-47855216 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 75

Conread position: 371-496
Cow position: chrX:34508562-34508690 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 372-507
Cow position: chrX:31626954-31626820 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 121, 41

Conread position: 372-563
Cow position: chrX:41810149-41809959 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 43, 128

Conread position: 372-575
Cow position: chrX:5026275-5026479 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 166
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 47, 117

Conread position: 372-579
Cow position: chrX:31744986-31744783 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 21, 130

Conread position: 372-585
Cow position: chrX:19717540-19717749 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 38, 94

Conread position: 372-586
Cow position: chrX:32877356-32877140 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 43, 176

Conread position: 373-577
Cow position: chrX:35285193-35285404 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 42, 96

Conread position: 373-578
Cow position: chrX:40336931-40337142 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 373-581
Cow position: chrX:28067870-28068085 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 42, 96

Conread position: 373-585
Cow position: chrX:20340623-20340420 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 45, 108

Conread position: 374-569
Cow position: chrX:44991392-44991195 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 45, 61

Conread position: 375-509
Cow position: chrX:40355057-40355190 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 376-570
Cow position: chrX:35681589-35681790 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 376-581
Cow position: chrX:2206569-2206356 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 94, 37

Conread position: 377-586
Cow position: chrX:51872-51660 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 117, 28

Conread position: 377-586
Cow position: chrX:32866899-32867109 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 121

Conread position: 379-570
Cow position: chrX:7911046-7910850 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 37, 73

Conread position: 379-586
Cow position: chrX:23359085-23358878 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 380-580
Cow position: chrX:41166799-41166596 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 111

Conread position: 380-580
Cow position: chrX:46079112-46079321 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 90

Conread position: 381-575
Cow position: chrX:40046547-40046335 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 129, 0

Conread position: 381-585
Cow position: chrX:2314591-2314378 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 39, 89

Conread position: 382-585
Cow position: chrX:34398755-34398546 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 88

Conread position: 383-490
Cow position: chrX:4942228-4942118 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 383-581
Cow position: chrX:8326934-8327139 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 30, 0

Conread position: 383-586
Cow position: chrX:41453332-41453538 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 36, 0

Conread position: 384-544
Cow position: chrX:29688144-29687978 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 29, 86

Conread position: 384-570
Cow position: chrX:41858850-41858661 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 147
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 35, 9

Conread position: 385-584
Cow position: chrX:48822310-48822105 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 385-587
Cow position: chrX:4091956-4092162 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 30, 168

Conread position: 385-587
Cow position: chrX:37749951-37749754 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 31, 111

Conread position: 388-578
Cow position: chrX:27270410-27270600 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 27, 82

Conread position: 388-581
Cow position: chrX:17498357-17498557 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 81

Conread position: 388-586
Cow position: chrX:5487897-5487709 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 22, 0

Conread position: 388-586
Cow position: chrX:12212710-12212904 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 137
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 184, 91

Conread position: 388-586
Cow position: chrX:34991399-34991599 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 31, 189

Conread position: 391-575
Cow position: chrX:8642084-8642273 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 24, 59

Conread position: 391-583
Cow position: chrX:40648934-40649137 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 21, 193

Conread position: 392-584
Cow position: chrX:11602444-11602250 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 37

Conread position: 393-580
Cow position: chrX:27415540-27415355 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 26, 109

Conread position: 393-587
Cow position: chrX:35409792-35409992 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 62

Conread position: 393-587
Cow position: chrX:36367895-36367694 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 77

Conread position: 394-575
Cow position: chrX:31983544-31983350 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 158
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 19, 0

Conread position: 394-581
Cow position: chrX:37867477-37867667 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 84, 17

Conread position: 395-561
Cow position: chrX:25286679-25286508 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 70, 119

Conread position: 395-577
Cow position: chrX:23471824-23471638 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 145
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 24, 0

Conread position: 397-582
Cow position: chrX:48372451-48372267 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 19, 62

Conread position: 397-586
Cow position: chrX:20666857-20666664 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 22, 101

Conread position: 406-577
Cow position: chrX:6480539-6480365 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 93, 7

Conread position: 406-586
Cow position: chrX:11529399-11529579 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 163, 92

Conread position: 407-579
Cow position: chrX:1102074-1102246 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 99, 127

Conread position: 410-587
Cow position: chrX:44995558-44995740 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 411-576
Cow position: chrX:1938075-1938242 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 33

Conread position: 413-537
Cow position: chrX:40543458-40543338 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 413-563
Cow position: chrX:31986511-31986356 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 20, 56

Conread position: 413-570
Cow position: chrX:6640490-6640647 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 129
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 74, 53

Conread position: 413-570
Cow position: chrX:27202633-27202792 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 413-570
Cow position: chrX:47191257-47191099 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 413-575
Cow position: chrX:31827781-31827627 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 413-577
Cow position: chrX:1101620-1101780 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 413-578
Cow position: chrX:23485584-23485761 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 77, 71

Conread position: 413-578
Cow position: chrX:29682048-29681887 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 67, 0

Conread position: 413-578
Cow position: chrX:46068696-46068533 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 81, 0

Conread position: 413-580
Cow position: chrX:231955-231792 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 159, 131

Conread position: 413-580
Cow position: chrX:16556154-16555990 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 413-580
Cow position: chrX:27170802-27170967 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 108

Conread position: 413-580
Cow position: chrX:42760315-42760486 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 413-580
Cow position: chrX:42875275-42875442 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 413-581
Cow position: chrX:1121304-1121132 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 54

Conread position: 413-581
Cow position: chrX:4169968-4169794 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 125, 54

Conread position: 413-581
Cow position: chrX:37867316-37867488 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 63, 53

Conread position: 413-583
Cow position: chrX:15100046-15100214 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 54

Conread position: 413-584
Cow position: chrX:8759689-8759860 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 57, 25

Conread position: 413-584
Cow position: chrX:23136803-23136967 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 110, 73

Conread position: 413-584
Cow position: chrX:34270624-34270798 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 62, 51

Conread position: 413-584
Cow position: chrX:37752043-37751874 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 63, 54

Conread position: 413-584
Cow position: chrX:39642559-39642391 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 138
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 36, 0

Conread position: 413-584
Cow position: chrX:40556396-40556224 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 57, 104

Conread position: 413-585
Cow position: chrX:12813-12980 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 413-585
Cow position: chrX:17525804-17525639 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 83, 0

Conread position: 413-585
Cow position: chrX:44798986-44798813 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 80

Conread position: 413-586
Cow position: chrX:6389144-6389317 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 86, 22

Conread position: 413-586
Cow position: chrX:11589304-11589129 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 81, 162

Conread position: 413-586
Cow position: chrX:26882017-26881838 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 63, 54

Conread position: 413-586
Cow position: chrX:32747795-32747959 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 413-586
Cow position: chrX:41010961-41011129 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 413-586
Cow position: chrX:41199287-41199465 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 32, 56

Conread position: 413-586
Cow position: chrX:41790366-41790188 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 413-588
Cow position: chrX:1960362-1960184 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 63, 53

Conread position: 414-576
Cow position: chrX:9451409-9451570 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 58, 41

Conread position: 414-581
Cow position: chrX:3494981-3494816 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 25, 0

Conread position: 414-585
Cow position: chrX:47431474-47431304 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 91, 43

Conread position: 415-582
Cow position: chrX:47979360-47979533 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 143

Conread position: 415-587
Cow position: chrX:14135743-14135917 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 142
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 164, 0

Conread position: 419-561
Cow position: chrX:4366409-4366559 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 419-577
Cow position: chrX:41215391-41215553 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 131
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 73, 0

Conread position: 420-562
Cow position: chrX:39419644-39419506 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 420-569
Cow position: chrX:25420401-25420546 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 123
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 135, 78

Conread position: 420-581
Cow position: chrX:35509609-35509446 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 56, 47

Conread position: 420-586
Cow position: chrX:4486954-4486785 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 66, 0

Conread position: 421-576
Cow position: chrX:16763854-16763701 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 421-586
Cow position: chrX:16801192-16801028 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 73, 22

Conread position: 421-587
Cow position: chrX:5097728-5097554 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 141

Conread position: 422-584
Cow position: chrX:45657868-45657698 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 422-586
Cow position: chrX:16770136-16770304 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 44

Conread position: 422-586
Cow position: chrX:24425930-24425762 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 90, 45

Conread position: 424-570
Cow position: chrX:43059177-43059033 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 63, 0

Conread position: 424-584
Cow position: chrX:42506875-42506707 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 424-585
Cow position: chrX:47730556-47730719 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 425-586
Cow position: chrX:35029851-35029698 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 73, 0

Conread position: 425-587
Cow position: chrX:1571514-1571354 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 36

Conread position: 428-585
Cow position: chrX:37717800-37717960 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 12

Conread position: 429-578
Cow position: chrX:31279845-31279696 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 124
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 432-583
Cow position: chrX:43028314-43028465 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 434-586
Cow position: chrX:1996368-1996212 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 33

Conread position: 436-580
Cow position: chrX:17744710-17744854 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 437-579
Cow position: chrX:37176961-37177099 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 117
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 103, 0

Conread position: 437-585
Cow position: chrX:40108256-40108106 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 441-581
Cow position: chrX:41959845-41959981 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 446-570
Cow position: chrX:42216535-42216410 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 109
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 62, 0

Conread position: 448-588
Cow position: chrX:10479847-10479991 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 455-581
Cow position: chrX:34432689-34432569 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 455-586
Cow position: chrX:38727033-38726905 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 461-575
Cow position: chrX:15534101-15533982 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 473-584
Cow position: chrX:38080270-38080385 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 0

Show alignments to all cow chromosomes.