Cow genome map
| Conread name: | Ss1.1-Emb1-C0005188_L20.5 |
| Conread position: | 4-136 |
| Cow position: | chr12:8711021-8711155 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 46, 39 |
| Conread position: | 5-116 |
| Cow position: | chr12:12232920-12233033 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 6-113 |
| Cow position: | chr12:29358023-29357916 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-125 |
| Cow position: | chr12:29731354-29731472 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 6-126 |
| Cow position: | chr12:583470-583342 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 6-126 |
| Cow position: | chr12:15089555-15089678 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 6-129 |
| Cow position: | chr12:2964087-2964211 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 44, 37 |
| Conread position: | 6-130 |
| Cow position: | chr12:7884641-7884514 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 55, 37 |
| Conread position: | 6-134 |
| Cow position: | chr12:38679089-38679217 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 37, 117 |
| Conread position: | 6-135 |
| Cow position: | chr12:3579524-3579655 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 7-115 |
| Cow position: | chr12:40435002-40434892 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 7-130 |
| Cow position: | chr12:37169905-37169783 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 68 |
| Conread position: | 7-144 |
| Cow position: | chr12:30745757-30745896 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 8-132 |
| Cow position: | chr12:10611701-10611826 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 16 |
| Conread position: | 11-130 |
| Cow position: | chr12:38165496-38165375 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 11-130 |
| Cow position: | chr12:44211197-44211321 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
Show alignments to all cow chromosomes.