Cow genome map
| Conread name: | Ss1.1-Emb1-C0005188_L20.5 |
| Conread position: | 4-125 |
| Cow position: | chr18:22180734-22180615 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 4-130 |
| Cow position: | chr18:50004662-50004535 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 50, 39 |
| Conread position: | 4-131 |
| Cow position: | chr18:51383354-51383226 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 52, 39 |
| Conread position: | 6-114 |
| Cow position: | chr18:44548701-44548591 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 6-117 |
| Cow position: | chr18:21143918-21143810 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 6-128 |
| Cow position: | chr18:9365966-9366091 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 6-130 |
| Cow position: | chr18:2793926-2793805 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 6-130 |
| Cow position: | chr18:17838091-17837963 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 6-130 |
| Cow position: | chr18:23630562-23630444 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 6-131 |
| Cow position: | chr18:25598187-25598061 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 6-132 |
| Cow position: | chr18:11691364-11691234 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 32, 120 |
| Conread position: | 6-132 |
| Cow position: | chr18:42432044-42431918 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 113, 42 |
| Conread position: | 6-134 |
| Cow position: | chr18:4152509-4152378 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 6-138 |
| Cow position: | chr18:4626745-4626611 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 6-139 |
| Cow position: | chr18:11779698-11779830 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 48, 108 |
| Conread position: | 6-139 |
| Cow position: | chr18:22790043-22789909 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 6-144 |
| Cow position: | chr18:18722121-18722256 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 50, 38 |
| Conread position: | 6-160 |
| Cow position: | chr18:34444691-34444537 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 50, 38 |
| Conread position: | 6-165 |
| Cow position: | chr18:4884474-4884314 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 37, 13 |
| Conread position: | 7-129 |
| Cow position: | chr18:49440887-49441013 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 7-129 |
| Cow position: | chr18:50095363-50095239 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 8-141 |
| Cow position: | chr18:9974281-9974148 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 38, 17 |
| Conread position: | 8-152 |
| Cow position: | chr18:9010755-9010900 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 132, 35 |
| Conread position: | 11-128 |
| Cow position: | chr18:8171035-8170922 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 12-130 |
| Cow position: | chr18:12026566-12026685 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 41, 31 |
| Conread position: | 18-130 |
| Cow position: | chr18:17974682-17974794 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 20, 104 |
Show alignments to all cow chromosomes.