Cow genome map
| Conread name: | Ss1.1-Emb1-C0005188_L20.5 |
| Conread position: | 2-128 |
| Cow position: | chr2:3773252-3773123 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 3-134 |
| Cow position: | chr2:71437302-71437166 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 4-126 |
| Cow position: | chr2:45597057-45597179 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 57, 26 |
| Conread position: | 4-128 |
| Cow position: | chr2:62743932-62743807 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 54, 39 |
| Conread position: | 4-129 |
| Cow position: | chr2:11435363-11435488 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-129 |
| Cow position: | chr2:46189019-46188893 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 39 |
| Conread position: | 4-129 |
| Cow position: | chr2:77140503-77140378 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 42 |
| Conread position: | 5-133 |
| Cow position: | chr2:51099897-51099766 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 6-119 |
| Cow position: | chr2:34811073-34810959 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 52, 82 |
| Conread position: | 6-125 |
| Cow position: | chr2:4207489-4207369 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 6-127 |
| Cow position: | chr2:64562860-64562735 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 6-128 |
| Cow position: | chr2:19494293-19494417 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 6-129 |
| Cow position: | chr2:18997798-18997920 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 6-129 |
| Cow position: | chr2:50449831-50449706 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 6-130 |
| Cow position: | chr2:1205383-1205510 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 6-130 |
| Cow position: | chr2:13001875-13002001 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 6-130 |
| Cow position: | chr2:16412584-16412709 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 51, 91 |
| Conread position: | 6-130 |
| Cow position: | chr2:44065650-44065769 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 6-130 |
| Cow position: | chr2:46120563-46120440 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 6-130 |
| Cow position: | chr2:63568789-63568914 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 6-139 |
| Cow position: | chr2:26574839-26574971 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 6-141 |
| Cow position: | chr2:1476486-1476624 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 88, 37 |
| Conread position: | 6-148 |
| Cow position: | chr2:39590336-39590479 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 24 |
| Conread position: | 7-129 |
| Cow position: | chr2:28330668-28330547 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 49 |
| Conread position: | 7-131 |
| Cow position: | chr2:68239283-68239407 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-130 |
| Cow position: | chr2:39456192-39456316 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 50, 35 |
| Conread position: | 10-148 |
| Cow position: | chr2:39187453-39187594 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 12-130 |
| Cow position: | chr2:19137805-19137686 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 12-130 |
| Cow position: | chr2:28872977-28873096 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 13-139 |
| Cow position: | chr2:56568519-56568388 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 14-126 |
| Cow position: | chr2:1358671-1358558 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 47, 29 |
| Conread position: | 16-122 |
| Cow position: | chr2:31223616-31223506 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 26-142 |
| Cow position: | chr2:30370611-30370492 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 126-527 |
| Cow position: | chr2:77385723-77385299 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 12 |
Show alignments to all cow chromosomes.