Cow genome map
| Conread name: | Ss1.1-Emb1-C0005188_L20.5 |
| Conread position: | 4-127 |
| Cow position: | chr3:53428865-53428741 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 45, 39 |
| Conread position: | 4-129 |
| Cow position: | chr3:75907964-75908090 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 54, 39 |
| Conread position: | 4-130 |
| Cow position: | chr3:50768731-50768859 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 4-130 |
| Cow position: | chr3:75480051-75480178 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 4-138 |
| Cow position: | chr3:55177694-55177563 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 5-129 |
| Cow position: | chr3:78077243-78077369 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 6-125 |
| Cow position: | chr3:70609680-70609800 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 76 |
| Conread position: | 6-126 |
| Cow position: | chr3:19585917-19586040 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 6-127 |
| Cow position: | chr3:52845610-52845732 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 52, 38 |
| Conread position: | 6-128 |
| Cow position: | chr3:75107828-75107950 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 49, 31 |
| Conread position: | 6-129 |
| Cow position: | chr3:76156041-76156165 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 6-130 |
| Cow position: | chr3:56943872-56943750 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 6-130 |
| Cow position: | chr3:64196880-64197007 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 6-132 |
| Cow position: | chr3:59604897-59605024 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 6-134 |
| Cow position: | chr3:76269945-76270072 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 6-137 |
| Cow position: | chr3:48072828-48072700 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 37 |
| Conread position: | 7-142 |
| Cow position: | chr3:3883761-3883625 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 119, 47 |
| Conread position: | 8-142 |
| Cow position: | chr3:3887584-3887449 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 54, 36 |
| Conread position: | 16-147 |
| Cow position: | chr3:15057580-15057446 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 28, 124 |
| Conread position: | 45-150 |
| Cow position: | chr3:39909561-39909458 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
Show alignments to all cow chromosomes.