Cow genome map
| Conread name: | Ss1.1-Emb1-C0005190_O01.5 |
| Conread position: | 1-314 |
| Cow position: | chr10:9010148-9009835 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 126, 114 |
| Conread position: | 1-328 |
| Cow position: | chr10:9031337-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-337 |
| Cow position: | chr10:8996336-8995998 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 331, 0 |
| Conread position: | 1-368 |
| Cow position: | chr10:9010232-9009865 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-431 |
| Cow position: | chr10:8996504-8996074 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 390, 371 |
| Conread position: | 1-431 |
| Cow position: | chr10:8996588-8996158 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 394, 373 |
| Conread position: | 1-431 |
| Cow position: | chr10:8996756-8996326 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 385, 373 |
| Conread position: | 1-432 |
| Cow position: | chr10:8996672-8996241 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 388, 370 |
| Conread position: | 1-432 |
| Cow position: | chr10:9010484-9010053 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 126, 114 |
| Conread position: | 10-379 |
| Cow position: | chr10:9010559-9010189 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 246 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 124, 120 |
| Conread position: | 10-412 |
| Cow position: | chr10:9031262-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 48 |
| Conread position: | 10-422 |
| Cow position: | chr10:9010307-9009895 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 262 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 362, 372 |
| Conread position: | 10-431 |
| Cow position: | chr10:8996831-8996410 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 362, 374 |
| Conread position: | 10-431 |
| Cow position: | chr10:21939063-21938645 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 381, 316 |
| Conread position: | 19-432 |
| Cow position: | chr10:21939222-21938809 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 252 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 42, 52 |
| Conread position: | 60-432 |
| Cow position: | chr10:9031228-9031600 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 83 |
| Conread position: | 91-431 |
| Cow position: | chr10:9031175-9031515 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 281, 303 |
| Conread position: | 93-425 |
| Cow position: | chr10:9010560-9010228 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 298, 275 |
| Conread position: | 102-370 |
| Cow position: | chr10:21939223-21938955 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 32, 28 |
| Conread position: | 124-432 |
| Cow position: | chr10:8996885-8996577 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 55, 48 |
Show alignments to all cow chromosomes.