Cow genome map
| Conread name: | Ss1.1-Emb1-C0005190_O01.5 |
| Conread position: | 1-360 |
| Cow position: | chr13:24162996-24163355 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 65, 60 |
| Conread position: | 1-368 |
| Cow position: | chr13:22125354-22125721 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 77, 64 |
| Conread position: | 1-425 |
| Cow position: | chr13:22124766-22125190 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 331, 325 |
| Conread position: | 1-425 |
| Cow position: | chr13:24162492-24162916 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 331, 325 |
| Conread position: | 1-425 |
| Cow position: | chr13:39984409-39984833 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 264, 271 |
| Conread position: | 1-431 |
| Cow position: | chr13:24162660-24163090 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 165, 157 |
| Conread position: | 4-425 |
| Cow position: | chr13:39984160-39984581 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 36 |
| Conread position: | 10-422 |
| Cow position: | chr13:22125111-22125523 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 120, 124 |
| Conread position: | 10-423 |
| Cow position: | chr13:56292181-56291770 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 323, 25 |
| Conread position: | 10-425 |
| Cow position: | chr13:39983998-39984413 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-422 |
| Cow position: | chr13:56292512-56292108 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 258 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 179, 202 |
| Conread position: | 14-431 |
| Cow position: | chr13:56292337-56291931 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 273 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 64, 51 |
| Conread position: | 18-411 |
| Cow position: | chr13:39984510-39984903 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 260 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 210, 186 |
| Conread position: | 19-419 |
| Cow position: | chr13:29183798-29183402 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 235, 90 |
| Conread position: | 19-425 |
| Cow position: | chr13:39984259-39984665 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 261 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 19-432 |
| Cow position: | chr13:39984091-39984504 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 265 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 112, 102 |
| Conread position: | 19-432 |
| Cow position: | chr13:39984343-39984756 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 185 |
| Conread position: | 21-422 |
| Cow position: | chr13:39983841-39984242 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 121, 99 |
| Conread position: | 58-368 |
| Cow position: | chr13:24162465-24162775 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 7, 13 |
| Conread position: | 59-425 |
| Cow position: | chr13:56292718-56292352 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 139, 196 |
| Conread position: | 70-425 |
| Cow position: | chr13:39983974-39984329 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 77-419 |
| Cow position: | chr13:22124758-22125100 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 117, 132 |
| Conread position: | 93-424 |
| Cow position: | chr13:56292847-56292520 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 92, 72 |
Show alignments to all cow chromosomes.