Cow genome map


           Conread name:
           Ss1.1-Emb1-C0005190_O01.5
        

               Conread position:
               1-233
               

               Cow position:
               chr29:39627085-39626853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               196, 208
               

               Conread position:
               1-425
               

               Cow position:
               chr29:39627418-39626997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               296, 162
               

               Conread position:
               1-425
               

               Cow position:
               chr29:39627502-39627081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               265
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               58, 35
               

               Conread position:
               1-431
               

               Cow position:
               chr29:39627334-39626907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               275
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               216, 79
               

               Conread position:
               10-425
               

               Cow position:
               chr29:39627577-39627165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               110, 116
               

               Conread position:
               17-402
               

               Cow position:
               chr29:39627237-39626852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               248
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               115, 103
               

               Conread position:
               93-417
               

               Cow position:
               chr29:39627578-39627254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               298, 280
               

               Conread position:
               127-425
               

               Cow position:
               chr29:39627628-39627330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               71, 85
               
Show alignments to all cow chromosomes.