Cow genome map
| Conread name: | Ss1.1-Emb1-C0005190_O01.5 |
| Conread position: | 1-347 |
| Cow position: | chr6:49396299-49396645 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 135, 142 |
| Conread position: | 1-382 |
| Cow position: | chr6:49341082-49341462 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 204 |
| Conread position: | 1-422 |
| Cow position: | chr6:49340494-49340915 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-425 |
| Cow position: | chr6:49340662-49341086 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 24 |
| Conread position: | 1-425 |
| Cow position: | chr6:49340830-49341254 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 24 |
| Conread position: | 1-425 |
| Cow position: | chr6:49340998-49341422 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-431 |
| Cow position: | chr6:49340578-49341008 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-432 |
| Cow position: | chr6:49340746-49341177 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 106 |
| Conread position: | 10-422 |
| Cow position: | chr6:49340923-49341335 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-432 |
| Cow position: | chr6:49340419-49340841 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-431 |
| Cow position: | chr6:49395984-49396393 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 256 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 153, 135 |
| Conread position: | 19-431 |
| Cow position: | chr6:49396233-49396645 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 137, 132 |
| Conread position: | 19-431 |
| Cow position: | chr6:49396485-49396897 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 367, 355 |
| Conread position: | 70-431 |
| Cow position: | chr6:49340395-49340756 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 289 |
| Conread position: | 102-425 |
| Cow position: | chr6:49396232-49396555 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 53, 48 |
| Conread position: | 147-432 |
| Cow position: | chr6:49340388-49340673 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 198 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 229-426 |
| Cow position: | chr6:49340386-49340583 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.