Cow genome map


           Conread name:
           Ss1.1-Emb1-C0005193_O22.5
        

               Conread position:
               305-530
               

               Cow position:
               chr10:26111775-26111992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               533-669
               

               Cow position:
               chr10:25475297-25475440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               535-670
               

               Cow position:
               chr10:23376742-23376604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               540-669
               

               Cow position:
               chr10:1978938-1978802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               541-657
               

               Cow position:
               chr10:6719628-6719747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               8, 84
               

               Conread position:
               541-667
               

               Cow position:
               chr10:15462224-15462345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               8, 83
               

               Conread position:
               541-669
               

               Cow position:
               chr10:2185058-2185185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               8, 98
               

               Conread position:
               541-669
               

               Cow position:
               chr10:22528175-22528046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               8, 87
               

               Conread position:
               541-669
               

               Cow position:
               chr10:32093531-32093660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               105, 9
               

               Conread position:
               541-669
               

               Cow position:
               chr10:37818833-37818699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               10, 20
               

               Conread position:
               541-669
               

               Cow position:
               chr10:49923627-49923494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               8, 21
               

               Conread position:
               541-670
               

               Cow position:
               chr10:19394852-19394726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               541-684
               

               Cow position:
               chr10:54730738-54730887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               8, 20
               

               Conread position:
               542-669
               

               Cow position:
               chr10:20997548-20997419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               84, 26
               

               Conread position:
               542-680
               

               Cow position:
               chr10:56828593-56828449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               7, 19
               

               Conread position:
               544-666
               

               Cow position:
               chr10:44771386-44771510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               100, 80
               

               Conread position:
               545-669
               

               Cow position:
               chr10:35862499-35862369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               89, 82
               

               Conread position:
               546-635
               

               Cow position:
               chr10:58066402-58066314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               90
               

               Alignm identity:
               79
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               546-662
               

               Cow position:
               chr10:48369876-48369754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               546-663
               

               Cow position:
               chr10:31266595-31266484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               546-669
               

               Cow position:
               chr10:3998637-3998761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               95, 78
               

               Conread position:
               546-669
               

               Cow position:
               chr10:5890038-5889912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               86, 78
               

               Conread position:
               546-669
               

               Cow position:
               chr10:6516454-6516325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               86, 78
               

               Conread position:
               546-669
               

               Cow position:
               chr10:22520433-22520306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               92, 14
               

               Conread position:
               546-669
               

               Cow position:
               chr10:24153266-24153141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               100, 78
               

               Conread position:
               546-669
               

               Cow position:
               chr10:24732042-24732171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               546-669
               

               Cow position:
               chr10:28105340-28105225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               546-669
               

               Cow position:
               chr10:35857322-35857197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               50, 31
               

               Conread position:
               546-669
               

               Cow position:
               chr10:35887674-35887552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               546-669
               

               Cow position:
               chr10:40421113-40420984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               546-669
               

               Cow position:
               chr10:42312640-42312764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               90, 77
               

               Conread position:
               546-669
               

               Cow position:
               chr10:46801273-46801146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               546-669
               

               Cow position:
               chr10:47542823-47542944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               100, 37
               

               Conread position:
               546-669
               

               Cow position:
               chr10:49568936-49569060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               15, 79
               

               Conread position:
               546-669
               

               Cow position:
               chr10:52113933-52113812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               78, 90
               

               Conread position:
               546-669
               

               Cow position:
               chr10:52296230-52296358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               89, 14
               

               Conread position:
               546-669
               

               Cow position:
               chr10:54476844-54476964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               546-669
               

               Cow position:
               chr10:57457064-57457193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               546-670
               

               Cow position:
               chr10:65132691-65132813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               107, 78
               

               Conread position:
               546-678
               

               Cow position:
               chr10:16740327-16740191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               9, 80
               

               Conread position:
               546-678
               

               Cow position:
               chr10:56835011-56835147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               90, 77
               

               Conread position:
               546-680
               

               Cow position:
               chr10:12392871-12392737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               54, 79
               

               Conread position:
               548-665
               

               Cow position:
               chr10:24133086-24132964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               78, 57
               

               Conread position:
               548-665
               

               Cow position:
               chr10:24547993-24548111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               97, 12
               

               Conread position:
               548-665
               

               Cow position:
               chr10:52152257-52152375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               99, 76
               

               Conread position:
               548-666
               

               Cow position:
               chr10:26577284-26577405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               548-667
               

               Cow position:
               chr10:2449086-2449208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               6, 77
               

               Conread position:
               548-667
               

               Cow position:
               chr10:10752246-10752122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               548-667
               

               Cow position:
               chr10:23506751-23506631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               100, 76
               

               Conread position:
               548-667
               

               Cow position:
               chr10:28671089-28670970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               10, 74
               

               Conread position:
               548-667
               

               Cow position:
               chr10:32774849-32774964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               14, 68
               

               Conread position:
               548-667
               

               Cow position:
               chr10:35753226-35753101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               548-667
               

               Cow position:
               chr10:35767344-35767227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               548-667
               

               Cow position:
               chr10:35912010-35911892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               97, 13
               

               Conread position:
               548-667
               

               Cow position:
               chr10:41408021-41408139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               548-667
               

               Cow position:
               chr10:53935005-53934882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               78, 39
               

               Conread position:
               548-667
               

               Cow position:
               chr10:63627947-63628059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               548-668
               

               Cow position:
               chr10:4711364-4711489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               548-668
               

               Cow position:
               chr10:6852006-6852128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               95, 73
               

               Conread position:
               548-668
               

               Cow position:
               chr10:24870899-24871021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               548-668
               

               Cow position:
               chr10:58259781-58259659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               96, 76
               

               Conread position:
               548-669
               

               Cow position:
               chr10:721033-721159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               88, 76
               

               Conread position:
               548-669
               

               Cow position:
               chr10:1087754-1087878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               88, 12
               

               Conread position:
               548-669
               

               Cow position:
               chr10:1976586-1976463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               94, 76
               

               Conread position:
               548-669
               

               Cow position:
               chr10:4310922-4311046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               98, 76
               

               Conread position:
               548-669
               

               Cow position:
               chr10:5264435-5264556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               97, 12
               

               Conread position:
               548-669
               

               Cow position:
               chr10:6489600-6489727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               548-669
               

               Cow position:
               chr10:6505095-6505221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               93, 76
               

               Conread position:
               548-669
               

               Cow position:
               chr10:6986186-6986303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               548-669
               

               Cow position:
               chr10:8093581-8093456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               78, 66
               

               Conread position:
               548-669
               

               Cow position:
               chr10:8923669-8923796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               548-669
               

               Cow position:
               chr10:8934221-8934341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               548-669
               

               Cow position:
               chr10:9445279-9445156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               97, 75
               

               Conread position:
               548-669
               

               Cow position:
               chr10:10573588-10573711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               78, 13
               

               Conread position:
               548-669
               

               Cow position:
               chr10:11080692-11080819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               548-669
               

               Cow position:
               chr10:12101107-12100985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               96, 12
               

               Conread position:
               548-669
               

               Cow position:
               chr10:15293006-15293132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               78, 37
               

               Conread position:
               548-669
               

               Cow position:
               chr10:15867970-15868094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               78, 12
               

               Conread position:
               548-669
               

               Cow position:
               chr10:15872128-15872014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               548-669
               

               Cow position:
               chr10:16092950-16093073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               67, 6
               

               Conread position:
               548-669
               

               Cow position:
               chr10:16598423-16598544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               96, 76
               

               Conread position:
               548-669
               

               Cow position:
               chr10:16830693-16830567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               78, 66
               

               Conread position:
               548-669
               

               Cow position:
               chr10:19503739-19503621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               548-669
               

               Cow position:
               chr10:19895134-19895256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               98, 12
               

               Conread position:
               548-669
               

               Cow position:
               chr10:20372397-20372270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               548-669
               

               Cow position:
               chr10:20446834-20446952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               548-669
               

               Cow position:
               chr10:22616909-22616781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               548-669
               

               Cow position:
               chr10:23912762-23912639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               98, 76
               

               Conread position:
               548-669
               

               Cow position:
               chr10:23936218-23936342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               88, 12
               

               Conread position:
               548-669
               

               Cow position:
               chr10:24744862-24744988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               90, 76
               

               Conread position:
               548-669
               

               Cow position:
               chr10:25509433-25509557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               89, 76
               

               Conread position:
               548-669
               

               Cow position:
               chr10:26608154-26608027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               548-669
               

               Cow position:
               chr10:28835965-28836080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               548-669
               

               Cow position:
               chr10:34430480-34430362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               96, 12
               

               Conread position:
               548-669
               

               Cow position:
               chr10:34554354-34554231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               98, 76
               

               Conread position:
               548-669
               

               Cow position:
               chr10:35026214-35026336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               67, 77
               

               Conread position:
               548-669
               

               Cow position:
               chr10:35715976-35715851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               548-669
               

               Cow position:
               chr10:35731791-35731665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               78, 13
               

               Conread position:
               548-669
               

               Cow position:
               chr10:35802635-35802511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               39, 74
               

               Conread position:
               548-669
               

               Cow position:
               chr10:37235817-37235692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               13, 23
               

               Conread position:
               548-669
               

               Cow position:
               chr10:37529535-37529408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               548-669
               

               Cow position:
               chr10:38014107-38014223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               548-669
               

               Cow position:
               chr10:39123967-39123840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               548-669
               

               Cow position:
               chr10:39646370-39646246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               96, 76
               

               Conread position:
               548-669
               

               Cow position:
               chr10:41941846-41941719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               84, 76
               

               Conread position:
               548-669
               

               Cow position:
               chr10:42230399-42230518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               93, 75
               

               Conread position:
               548-669
               

               Cow position:
               chr10:49169322-49169196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               88, 12
               

               Conread position:
               548-669
               

               Cow position:
               chr10:52569329-52569449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               98, 39
               

               Conread position:
               548-669
               

               Cow position:
               chr10:53248274-53248154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               8, 76
               

               Conread position:
               548-669
               

               Cow position:
               chr10:53336669-53336549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               548-669
               

               Cow position:
               chr10:53674557-53674682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               548-669
               

               Cow position:
               chr10:56475203-56475323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               548-669
               

               Cow position:
               chr10:59152129-59152008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               98, 76
               

               Conread position:
               548-669
               

               Cow position:
               chr10:59839551-59839427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               72, 85
               

               Conread position:
               548-669
               

               Cow position:
               chr10:61305016-61305138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               95, 13
               

               Conread position:
               548-669
               

               Cow position:
               chr10:61600482-61600363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               548-669
               

               Cow position:
               chr10:64182185-64182308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               86, 13
               

               Conread position:
               548-669
               

               Cow position:
               chr10:69935043-69934920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               98, 75
               

               Conread position:
               548-670
               

               Cow position:
               chr10:19094382-19094505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               98, 46
               

               Conread position:
               548-670
               

               Cow position:
               chr10:20132793-20132670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               96, 42
               

               Conread position:
               548-670
               

               Cow position:
               chr10:20735441-20735563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               12, 80
               

               Conread position:
               548-670
               

               Cow position:
               chr10:32503185-32503306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               93, 15
               

               Conread position:
               548-670
               

               Cow position:
               chr10:37528871-37528747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               98, 85
               

               Conread position:
               548-670
               

               Cow position:
               chr10:43288135-43288014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               548-670
               

               Cow position:
               chr10:51306061-51306188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               78, 12
               

               Conread position:
               548-670
               

               Cow position:
               chr10:58718386-58718515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               548-670
               

               Cow position:
               chr10:60357980-60358101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               11, 77
               

               Conread position:
               548-670
               

               Cow position:
               chr10:61588527-61588404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               96, 76
               

               Conread position:
               548-672
               

               Cow position:
               chr10:34906443-34906569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               88, 76
               

               Conread position:
               548-674
               

               Cow position:
               chr10:5543516-5543383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 72
               

               Conread position:
               548-674
               

               Cow position:
               chr10:22048986-22049118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               548-674
               

               Cow position:
               chr10:37444482-37444359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               548-674
               

               Cow position:
               chr10:38725394-38725518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               548-674
               

               Cow position:
               chr10:51288989-51289120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               78, 12
               

               Conread position:
               548-674
               

               Cow position:
               chr10:59844190-59844059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               548-677
               

               Cow position:
               chr10:34300242-34300372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               94, 12
               

               Conread position:
               548-678
               

               Cow position:
               chr10:10699776-10699644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               548-678
               

               Cow position:
               chr10:29628216-29628082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               92, 76
               

               Conread position:
               548-678
               

               Cow position:
               chr10:30914231-30914363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               87, 76
               

               Conread position:
               548-678
               

               Cow position:
               chr10:31466478-31466613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               78, 122
               

               Conread position:
               548-678
               

               Cow position:
               chr10:33891353-33891223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               98, 78
               

               Conread position:
               548-679
               

               Cow position:
               chr10:37287443-37287306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               89, 76
               

               Conread position:
               548-679
               

               Cow position:
               chr10:43451185-43451048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               89, 76
               

               Conread position:
               548-682
               

               Cow position:
               chr10:24752892-24753024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               98, 13
               

               Conread position:
               548-684
               

               Cow position:
               chr10:49045578-49045711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               93, 74
               

               Conread position:
               549-650
               

               Cow position:
               chr10:49456341-49456241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               549-669
               

               Cow position:
               chr10:11967111-11966984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               549-669
               

               Cow position:
               chr10:13391318-13391192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               549-669
               

               Cow position:
               chr10:57736429-57736304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               550-669
               

               Cow position:
               chr10:9798457-9798340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               96, 63
               

               Conread position:
               550-669
               

               Cow position:
               chr10:13586450-13586571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               96, 73
               

               Conread position:
               550-669
               

               Cow position:
               chr10:44681253-44681374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               7, 75
               

               Conread position:
               551-651
               

               Cow position:
               chr10:41803159-41803059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               86
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               94, 73
               

               Conread position:
               551-669
               

               Cow position:
               chr10:9576302-9576180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               551-669
               

               Cow position:
               chr10:15818059-15817935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               81, 73
               

               Conread position:
               551-669
               

               Cow position:
               chr10:18041922-18042042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               95, 73
               

               Conread position:
               551-669
               

               Cow position:
               chr10:32928505-32928623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               94, 10
               

               Conread position:
               552-680
               

               Cow position:
               chr10:11317769-11317899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               92, 71
               

               Conread position:
               553-669
               

               Cow position:
               chr10:11212851-11212973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               553-669
               

               Cow position:
               chr10:59588428-59588310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               93, 74
               

               Conread position:
               554-653
               

               Cow position:
               chr10:2974348-2974250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               86
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               554-669
               

               Cow position:
               chr10:1749315-1749436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               82, 69
               

               Conread position:
               557-669
               

               Cow position:
               chr10:36489762-36489873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               559-667
               

               Cow position:
               chr10:29251907-29252021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               67, 0
               
Show alignments to all cow chromosomes.