Cow genome map
| Conread name: | Ss1.1-Emb1-C0005193_O22.5 |
| Conread position: | 301-538 |
| Cow position: | |
| Alignm length: | 239 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 177, 20 |
| Conread position: | 524-669 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 23, 95 |
| Conread position: | 534-669 |
| Cow position: | |
| Alignm length: | 141 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 107, 10 |
| Conread position: | 541-667 |
| Cow position: | |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 85, 7 |
| Conread position: | 541-669 |
| Cow position: | |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 10, 26 |
| Conread position: | 541-669 |
| Cow position: | |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 541-678 |
| Cow position: | |
| Alignm length: | 141 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 8, 84 |
| Conread position: | 541-678 |
| Cow position: | |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 8, 85 |
| Conread position: | 542-669 |
| Cow position: | |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 542-670 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 13, 87 |
| Conread position: | 544-669 |
| Cow position: | |
| Alignm length: | 134 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 17, 81 |
| Conread position: | 545-681 |
| Cow position: | |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 87, 76 |
| Conread position: | 546-640 |
| Cow position: | |
| Alignm length: | 95 |
| Alignm identity: | 80 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 546-656 |
| Cow position: | |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 79 |
| Conread position: | 546-666 |
| Cow position: | |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 91, 81 |
| Conread position: | 546-667 |
| Cow position: | |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 98, 78 |
| Conread position: | 546-667 |
| Cow position: | |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 105, 78 |
| Conread position: | 546-667 |
| Cow position: | |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 546-669 |
| Cow position: | |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 546-669 |
| Cow position: | |
| Alignm length: | 127 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 100, 78 |
| Conread position: | 546-669 |
| Cow position: | |
| Alignm length: | 131 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 92, 78 |
| Conread position: | 546-669 |
| Cow position: | |
| Alignm length: | 127 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 100, 81 |
| Conread position: | 546-669 |
| Cow position: | |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 100, 78 |
| Conread position: | 546-669 |
| Cow position: | |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 101, 15 |
| Conread position: | 546-669 |
| Cow position: | |
| Alignm length: | 131 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 90, 78 |
| Conread position: | 546-669 |
| Cow position: | |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 98, 82 |
| Conread position: | 546-669 |
| Cow position: | |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 88, 75 |
| Conread position: | 546-670 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 99, 44 |
| Conread position: | 546-670 |
| Cow position: | |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 98, 78 |
| Conread position: | 546-674 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 91, 78 |
| Conread position: | 546-674 |
| Cow position: | |
| Alignm length: | 131 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 97, 78 |
| Conread position: | 548-667 |
| Cow position: | |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 98, 76 |
| Conread position: | 548-667 |
| Cow position: | |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 96, 76 |
| Conread position: | 548-667 |
| Cow position: | |
| Alignm length: | 124 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 86, 76 |
| Conread position: | 548-667 |
| Cow position: | |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 548-667 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 78, 118 |
| Conread position: | 548-668 |
| Cow position: | |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 548-668 |
| Cow position: | |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 98, 76 |
| Conread position: | 548-668 |
| Cow position: | |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 548-669 |
| Cow position: | |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 548-669 |
| Cow position: | |
| Alignm length: | 129 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 88, 79 |
| Conread position: | 548-669 |
| Cow position: | |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 89, 76 |
| Conread position: | 548-669 |
| Cow position: | |
| Alignm length: | 125 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 98, 76 |
| Conread position: | 548-669 |
| Cow position: | |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 85, 76 |
| Conread position: | 548-669 |
| Cow position: | |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 548-669 |
| Cow position: | |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 88, 76 |
| Conread position: | 548-669 |
| Cow position: | |
| Alignm length: | 122 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 548-669 |
| Cow position: | |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 86, 76 |
| Conread position: | 548-669 |
| Cow position: | |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 90, 76 |
| Conread position: | 548-669 |
| Cow position: | |
| Alignm length: | 127 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 86, 76 |
| Conread position: | 548-669 |
| Cow position: | |
| Alignm length: | 125 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 88, 12 |
| Conread position: | 548-669 |
| Cow position: | |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 78, 12 |
| Conread position: | 548-669 |
| Cow position: | |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 93, 12 |
| Conread position: | 548-669 |
| Cow position: | |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 548-669 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 91, 76 |
| Conread position: | 548-669 |
| Cow position: | |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 96, 76 |
| Conread position: | 548-669 |
| Cow position: | |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 548-669 |
| Cow position: | |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 97, 76 |
| Conread position: | 548-669 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 13, 30 |
| Conread position: | 548-669 |
| Cow position: | |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 96, 76 |
| Conread position: | 548-669 |
| Cow position: | |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 78, 12 |
| Conread position: | 548-669 |
| Cow position: | |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 78, 12 |
| Conread position: | 548-669 |
| Cow position: | |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 87, 76 |
| Conread position: | 548-669 |
| Cow position: | |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 96, 76 |
| Conread position: | 548-669 |
| Cow position: | |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 93, 76 |
| Conread position: | 548-669 |
| Cow position: | |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 78, 43 |
| Conread position: | 548-669 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 40, 12 |
| Conread position: | 548-670 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 88, 73 |
| Conread position: | 548-670 |
| Cow position: | |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 548-670 |
| Cow position: | |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 93, 75 |
| Conread position: | 548-670 |
| Cow position: | |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 45, 12 |
| Conread position: | 548-674 |
| Cow position: | |
| Alignm length: | 131 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 93, 34 |
| Conread position: | 548-674 |
| Cow position: | |
| Alignm length: | 128 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 14, 77 |
| Conread position: | 548-678 |
| Cow position: | |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 548-678 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 89, 76 |
| Conread position: | 548-678 |
| Cow position: | |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 96, 76 |
| Conread position: | 548-678 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 78 |
| Conread position: | 548-678 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 90, 76 |
| Conread position: | 548-678 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 89, 79 |
| Conread position: | 548-680 |
| Cow position: | |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 548-684 |
| Cow position: | |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 123, 16 |
| Conread position: | 548-684 |
| Cow position: | |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 97, 79 |
| Conread position: | 548-703 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 91, 79 |
| Conread position: | 550-659 |
| Cow position: | |
| Alignm length: | 111 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 96, 77 |
| Conread position: | 550-667 |
| Cow position: | |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 550-669 |
| Cow position: | |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 95, 11 |
| Conread position: | 550-669 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 86, 74 |
| Conread position: | 550-669 |
| Cow position: | |
| Alignm length: | 120 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 550-669 |
| Cow position: | |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 96, 61 |
| Conread position: | 550-669 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 550-678 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 84, 74 |
| Conread position: | 550-678 |
| Cow position: | |
| Alignm length: | 130 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 94, 74 |
| Conread position: | 551-669 |
| Cow position: | |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 553-674 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 79, 70 |
| Conread position: | 554-669 |
| Cow position: | |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 90, 70 |
| Conread position: | 554-669 |
| Cow position: | |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 554-669 |
| Cow position: | |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 82, 70 |
| Conread position: | 554-669 |
| Cow position: | |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 82, 73 |
| Conread position: | 554-670 |
| Cow position: | |
| Alignm length: | 120 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 92, 70 |
| Conread position: | 555-669 |
| Cow position: | |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 90, 69 |
| Conread position: | 555-669 |
| Cow position: | |
| Alignm length: | 115 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 556-667 |
| Cow position: | |
| Alignm length: | 115 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 70, 38 |
| Conread position: | 557-669 |
| Cow position: | |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 557-669 |
| Cow position: | |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 557-678 |
| Cow position: | |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 87, 78 |
Show alignments to all cow chromosomes.