Cow genome map
Conread name: | Ss1.1-Emb1-C0005193_O22.5 |
Conread position: | 507-669 |
Cow position: | chr18:30794118-30794283 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 133 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 39, 34 |
Conread position: | 535-669 |
Cow position: | chr18:18976799-18976937 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 110 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 86, 12 |
Conread position: | 538-669 |
Cow position: | chr18:81474-81606 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 103 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 88, 9 |
Conread position: | 541-659 |
Cow position: | chr18:4556667-4556550 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 98 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 8, 85 |
Conread position: | 541-669 |
Cow position: | chr18:35076105-35076234 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 105 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 8, 24 |
Conread position: | 541-669 |
Cow position: | chr18:55789274-55789141 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 104 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 543-669 |
Cow position: | chr18:24342346-24342469 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 102 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 37, 82 |
Conread position: | 544-678 |
Cow position: | chr18:33606354-33606486 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 110 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 100, 80 |
Conread position: | 546-666 |
Cow position: | chr18:20271296-20271174 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 100 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 102, 77 |
Conread position: | 546-667 |
Cow position: | chr18:15881133-15881011 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 97 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 99, 81 |
Conread position: | 546-669 |
Cow position: | chr18:2569524-2569653 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 111 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 546-669 |
Cow position: | chr18:11811703-11811825 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 103 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 95, 39 |
Conread position: | 546-669 |
Cow position: | chr18:22121158-22121032 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 107 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 100, 0 |
Conread position: | 546-669 |
Cow position: | chr18:26286637-26286760 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 103 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 64, 16 |
Conread position: | 546-669 |
Cow position: | chr18:27388273-27388400 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 99 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 546-669 |
Cow position: | chr18:34527378-34527250 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 105 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 97, 78 |
Conread position: | 548-658 |
Cow position: | chr18:18819940-18819829 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 91 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 91, 76 |
Conread position: | 548-658 |
Cow position: | chr18:50974851-50974745 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 94 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 548-665 |
Cow position: | chr18:8967724-8967845 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 101 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 90, 76 |
Conread position: | 548-667 |
Cow position: | chr18:20864709-20864834 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 102 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 89, 76 |
Conread position: | 548-667 |
Cow position: | chr18:21195613-21195491 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 104 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 11, 73 |
Conread position: | 548-667 |
Cow position: | chr18:33157547-33157665 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 93 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 548-667 |
Cow position: | chr18:48407515-48407640 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 105 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 548-668 |
Cow position: | chr18:2270777-2270652 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 107 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 84, 12 |
Conread position: | 548-668 |
Cow position: | chr18:19831023-19831140 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 99 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 548-669 |
Cow position: | chr18:2592447-2592320 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 106 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 91, 76 |
Conread position: | 548-669 |
Cow position: | chr18:2609003-2608879 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 101 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 88, 75 |
Conread position: | 548-669 |
Cow position: | chr18:5711942-5711819 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 102 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 14, 77 |
Conread position: | 548-669 |
Cow position: | chr18:7076489-7076618 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 103 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 72, 0 |
Conread position: | 548-669 |
Cow position: | chr18:7359460-7359588 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 103 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 548-669 |
Cow position: | chr18:11680446-11680573 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 100 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 548-669 |
Cow position: | chr18:13359788-13359913 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 103 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 78, 39 |
Conread position: | 548-669 |
Cow position: | chr18:14815609-14815489 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 101 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 548-669 |
Cow position: | chr18:15025405-15025522 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 103 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 548-669 |
Cow position: | chr18:20127376-20127254 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 102 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 97, 12 |
Conread position: | 548-669 |
Cow position: | chr18:25282829-25282704 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 105 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 51, 81 |
Conread position: | 548-669 |
Cow position: | chr18:25647523-25647403 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 101 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 93, 12 |
Conread position: | 548-669 |
Cow position: | chr18:38985413-38985540 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 100 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 548-669 |
Cow position: | chr18:39875533-39875410 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 101 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 10, 47 |
Conread position: | 548-669 |
Cow position: | chr18:40758942-40759063 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 103 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 96, 12 |
Conread position: | 548-669 |
Cow position: | chr18:45570747-45570863 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 98 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 548-669 |
Cow position: | chr18:46135046-46135165 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 96 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 548-669 |
Cow position: | chr18:49543204-49543324 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 104 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 79, 0 |
Conread position: | 548-669 |
Cow position: | chr18:49660314-49660193 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 13, 77 |
Conread position: | 548-669 |
Cow position: | chr18:50082520-50082401 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 103 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 13, 77 |
Conread position: | 548-670 |
Cow position: | chr18:11166705-11166829 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 104 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 96, 76 |
Conread position: | 548-670 |
Cow position: | chr18:36445158-36445287 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 110 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 58, 82 |
Conread position: | 548-670 |
Cow position: | chr18:36458660-36458781 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 102 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 548-670 |
Cow position: | chr18:48290712-48290587 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 106 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 98, 76 |
Conread position: | 548-672 |
Cow position: | chr18:35636624-35636499 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 101 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 93, 79 |
Conread position: | 548-672 |
Cow position: | chr18:45880284-45880166 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 100 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 548-672 |
Cow position: | chr18:51691742-51691612 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 105 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 548-673 |
Cow position: | chr18:51712983-51712852 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 107 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 548-674 |
Cow position: | chr18:18919227-18919105 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 101 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 98, 65 |
Conread position: | 548-674 |
Cow position: | chr18:35537503-35537381 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 99 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 548-678 |
Cow position: | chr18:3115186-3115317 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 102 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 76, 12 |
Conread position: | 548-678 |
Cow position: | chr18:21721554-21721422 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 103 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 97, 75 |
Conread position: | 548-681 |
Cow position: | chr18:20174404-20174272 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 102 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 549-661 |
Cow position: | chr18:12058744-12058857 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 94 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 95, 77 |
Conread position: | 549-668 |
Cow position: | chr18:27078576-27078693 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 95 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 549-669 |
Cow position: | chr18:56163314-56163436 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 100 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 93, 75 |
Conread position: | 549-684 |
Cow position: | chr18:49161729-49161588 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 112 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 550-669 |
Cow position: | chr18:24047976-24048092 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 99 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 550-669 |
Cow position: | chr18:39709618-39709740 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 102 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 87, 74 |
Conread position: | 551-669 |
Cow position: | chr18:44549178-44549066 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 96 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 551-669 |
Cow position: | chr18:48453422-48453543 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 101 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 551-669 |
Cow position: | chr18:50381986-50382107 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 101 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 45, 74 |
Conread position: | 552-674 |
Cow position: | chr18:23447352-23447229 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 104 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 92, 72 |
Conread position: | 553-669 |
Cow position: | chr18:28658183-28658060 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 101 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 88, 71 |
Conread position: | 554-674 |
Cow position: | chr18:19761430-19761554 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 104 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 72, 0 |
Conread position: | 555-669 |
Cow position: | chr18:13507999-13507890 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 95 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 557-677 |
Cow position: | chr18:38670377-38670253 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 100 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 84, 63 |
Show alignments to all cow chromosomes.