Cow genome map

Conread name: Ss1.1-Emb1-C0005193_O22.5

Conread position: 538-669
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 108, 9

Conread position: 540-669
Cow position:
Alignm length: 137
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 85

Conread position: 540-669
Cow position:
Alignm length: 131
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 85

Conread position: 541-669
Cow position:
Alignm length: 129
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 541-669
Cow position:
Alignm length: 136
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 23

Conread position: 541-669
Cow position:
Alignm length: 133
Alignm identity: 112
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 8, 84

Conread position: 541-669
Cow position:
Alignm length: 130
Alignm identity: 102
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 104, 83

Conread position: 541-669
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 91, 83

Conread position: 541-669
Cow position:
Alignm length: 131
Alignm identity: 101
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 8, 23

Conread position: 542-669
Cow position:
Alignm length: 131
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 104, 44

Conread position: 542-669
Cow position:
Alignm length: 128
Alignm identity: 105
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 545-669
Cow position:
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 80

Conread position: 545-669
Cow position:
Alignm length: 133
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 80

Conread position: 546-669
Cow position:
Alignm length: 124
Alignm identity: 103
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 78, 0

Conread position: 546-669
Cow position:
Alignm length: 133
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 97, 78

Conread position: 546-669
Cow position:
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 99, 15

Conread position: 546-669
Cow position:
Alignm length: 130
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 546-669
Cow position:
Alignm length: 127
Alignm identity: 106
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 98, 78

Conread position: 546-669
Cow position:
Alignm length: 130
Alignm identity: 106
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 546-669
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 90, 81

Conread position: 546-670
Cow position:
Alignm length: 129
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 95, 78

Conread position: 547-669
Cow position:
Alignm length: 126
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 98, 13

Conread position: 547-674
Cow position:
Alignm length: 134
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 79

Conread position: 548-665
Cow position:
Alignm length: 121
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 97, 57

Conread position: 548-667
Cow position:
Alignm length: 123
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 98, 76

Conread position: 548-667
Cow position:
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 548-667
Cow position:
Alignm length: 120
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 6, 0

Conread position: 548-667
Cow position:
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 60

Conread position: 548-667
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 548-667
Cow position:
Alignm length: 120
Alignm identity: 99
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 548-667
Cow position:
Alignm length: 123
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 97, 79

Conread position: 548-669
Cow position:
Alignm length: 124
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 97, 76

Conread position: 548-669
Cow position:
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 96, 76

Conread position: 548-669
Cow position:
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 79

Conread position: 548-669
Cow position:
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 76

Conread position: 548-669
Cow position:
Alignm length: 126
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 87, 78

Conread position: 548-669
Cow position:
Alignm length: 122
Alignm identity: 104
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 548-669
Cow position:
Alignm length: 128
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 548-669
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 101, 75

Conread position: 548-669
Cow position:
Alignm length: 128
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 84, 76

Conread position: 548-669
Cow position:
Alignm length: 125
Alignm identity: 105
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 78, 0

Conread position: 548-669
Cow position:
Alignm length: 125
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 98, 76

Conread position: 548-669
Cow position:
Alignm length: 126
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 548-669
Cow position:
Alignm length: 125
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 98, 16

Conread position: 548-669
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 548-669
Cow position:
Alignm length: 128
Alignm identity: 103
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 548-669
Cow position:
Alignm length: 129
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 91, 76

Conread position: 548-669
Cow position:
Alignm length: 129
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 12

Conread position: 548-669
Cow position:
Alignm length: 126
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 97, 76

Conread position: 548-669
Cow position:
Alignm length: 126
Alignm identity: 104
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 78, 45

Conread position: 548-669
Cow position:
Alignm length: 128
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 78, 12

Conread position: 548-669
Cow position:
Alignm length: 126
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 89, 76

Conread position: 548-669
Cow position:
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 97, 46

Conread position: 548-669
Cow position:
Alignm length: 122
Alignm identity: 103
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 548-669
Cow position:
Alignm length: 129
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 548-669
Cow position:
Alignm length: 123
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 93, 12

Conread position: 548-669
Cow position:
Alignm length: 124
Alignm identity: 108
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 97, 79

Conread position: 548-669
Cow position:
Alignm length: 122
Alignm identity: 100
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 548-669
Cow position:
Alignm length: 128
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 548-669
Cow position:
Alignm length: 127
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 61

Conread position: 548-669
Cow position:
Alignm length: 123
Alignm identity: 105
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 96, 17

Conread position: 548-669
Cow position:
Alignm length: 122
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 548-669
Cow position:
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 86, 76

Conread position: 548-669
Cow position:
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 97, 76

Conread position: 548-669
Cow position:
Alignm length: 128
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 548-669
Cow position:
Alignm length: 125
Alignm identity: 104
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 98, 76

Conread position: 548-669
Cow position:
Alignm length: 128
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 98, 73

Conread position: 548-670
Cow position:
Alignm length: 125
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 12

Conread position: 548-670
Cow position:
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 98, 76

Conread position: 548-672
Cow position:
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 15, 0

Conread position: 548-672
Cow position:
Alignm length: 129
Alignm identity: 104
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 548-674
Cow position:
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 548-674
Cow position:
Alignm length: 128
Alignm identity: 103
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 548-674
Cow position:
Alignm length: 134
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 91, 43

Conread position: 548-676
Cow position:
Alignm length: 129
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 548-677
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 548-678
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 76

Conread position: 548-678
Cow position:
Alignm length: 133
Alignm identity: 100
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 78, 0

Conread position: 548-678
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 89, 76

Conread position: 548-678
Cow position:
Alignm length: 134
Alignm identity: 102
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 87, 76

Conread position: 548-678
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 13, 80

Conread position: 548-683
Cow position:
Alignm length: 138
Alignm identity: 111
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 78, 84

Conread position: 548-684
Cow position:
Alignm length: 145
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 41

Conread position: 549-669
Cow position:
Alignm length: 121
Alignm identity: 93
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 104, 0

Conread position: 549-669
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 97, 75

Conread position: 549-669
Cow position:
Alignm length: 123
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 549-669
Cow position:
Alignm length: 124
Alignm identity: 103
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 549-669
Cow position:
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 549-669
Cow position:
Alignm length: 124
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 97, 75

Conread position: 549-670
Cow position:
Alignm length: 123
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 95, 74

Conread position: 550-649
Cow position:
Alignm length: 100
Alignm identity: 84
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 550-667
Cow position:
Alignm length: 121
Alignm identity: 101
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 94, 0

Conread position: 550-669
Cow position:
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 550-669
Cow position:
Alignm length: 127
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 550-670
Cow position:
Alignm length: 124
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 96, 11

Conread position: 551-658
Cow position:
Alignm length: 108
Alignm identity: 89
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 551-667
Cow position:
Alignm length: 120
Alignm identity: 100
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 93, 73

Conread position: 551-670
Cow position:
Alignm length: 128
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 115

Conread position: 551-678
Cow position:
Alignm length: 129
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 73

Conread position: 552-669
Cow position:
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 92, 72

Conread position: 552-669
Cow position:
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 110, 13

Conread position: 552-669
Cow position:
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 89, 72

Conread position: 552-669
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 553-670
Cow position:
Alignm length: 121
Alignm identity: 102
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 93, 71

Conread position: 554-669
Cow position:
Alignm length: 119
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 68, 95

Conread position: 554-669
Cow position:
Alignm length: 116
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 555-668
Cow position:
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 71, 0

Conread position: 555-669
Cow position:
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 71, 0

Conread position: 555-669
Cow position:
Alignm length: 118
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 69

Conread position: 555-669
Cow position:
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 89, 71

Conread position: 556-669
Cow position:
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 68

Conread position: 558-674
Cow position:
Alignm length: 117
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 561-674
Cow position:
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 85, 63

Show alignments to all cow chromosomes.