Cow genome map
Conread name: | Ss1.1-Emb1-C0005193_O22.5 |
Conread position: | 3-153 |
Cow position: | chr25:22708356-22708198 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 122 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 63, 136 |
Conread position: | 523-669 |
Cow position: | chr25:24669697-24669557 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 110 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 525-667 |
Cow position: | chr25:18988109-18988257 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 116 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 101, 0 |
Conread position: | 534-669 |
Cow position: | chr25:24405992-24405857 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 110 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 109, 13 |
Conread position: | 536-678 |
Cow position: | chr25:12294005-12293858 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 116 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 102, 11 |
Conread position: | 541-668 |
Cow position: | chr25:10643562-10643428 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 106 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 541-669 |
Cow position: | chr25:9957284-9957161 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 104 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 10, 74 |
Conread position: | 542-669 |
Cow position: | chr25:11585267-11585401 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 110 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 542-669 |
Cow position: | chr25:15694732-15694861 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 109 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 7, 81 |
Conread position: | 542-678 |
Cow position: | chr25:17475774-17475641 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 105 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 82, 0 |
Conread position: | 546-669 |
Cow position: | chr25:1735562-1735433 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 112 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 92, 78 |
Conread position: | 546-669 |
Cow position: | chr25:19679096-19679225 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 108 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 93, 78 |
Conread position: | 546-669 |
Cow position: | chr25:21895133-21895007 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 105 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 15, 79 |
Conread position: | 546-669 |
Cow position: | chr25:36026761-36026887 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 105 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 91, 75 |
Conread position: | 546-669 |
Cow position: | chr25:36037026-36036901 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 101 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 98, 78 |
Conread position: | 546-670 |
Cow position: | chr25:17354136-17354256 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 98 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 81, 0 |
Conread position: | 548-661 |
Cow position: | chr25:14117865-14117980 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 98 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 98, 79 |
Conread position: | 548-661 |
Cow position: | chr25:22531043-22531158 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 97 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 90, 66 |
Conread position: | 548-662 |
Cow position: | chr25:12174749-12174629 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 96 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 548-666 |
Cow position: | chr25:16400494-16400383 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 96 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 548-667 |
Cow position: | chr25:1096333-1096455 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 99 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 548-667 |
Cow position: | chr25:25051628-25051504 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 98 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 548-667 |
Cow position: | chr25:28188192-28188071 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 102 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 88, 15 |
Conread position: | 548-668 |
Cow position: | chr25:8347265-8347382 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 99 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 79, 0 |
Conread position: | 548-668 |
Cow position: | chr25:9023401-9023521 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 91, 31 |
Conread position: | 548-668 |
Cow position: | chr25:11437046-11436928 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 96 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 96, 76 |
Conread position: | 548-668 |
Cow position: | chr25:33256125-33256246 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 104 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 98, 12 |
Conread position: | 548-669 |
Cow position: | chr25:1837996-1838116 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 103 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 96, 26 |
Conread position: | 548-669 |
Cow position: | chr25:6891764-6891646 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 100 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 13, 68 |
Conread position: | 548-669 |
Cow position: | chr25:7440611-7440730 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 101 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 548-669 |
Cow position: | chr25:7581671-7581545 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 102 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 96, 12 |
Conread position: | 548-669 |
Cow position: | chr25:8918522-8918392 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 103 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 548-669 |
Cow position: | chr25:9842756-9842883 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 105 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 7, 47 |
Conread position: | 548-669 |
Cow position: | chr25:10156347-10156468 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 101 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 93, 75 |
Conread position: | 548-669 |
Cow position: | chr25:10365996-10365872 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 100 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 548-669 |
Cow position: | chr25:12204226-12204347 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 99 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 97, 76 |
Conread position: | 548-669 |
Cow position: | chr25:13720782-13720660 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 101 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 78, 51 |
Conread position: | 548-669 |
Cow position: | chr25:16001765-16001645 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 9, 77 |
Conread position: | 548-669 |
Cow position: | chr25:16064653-16064768 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 98 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 548-669 |
Cow position: | chr25:16319376-16319251 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 105 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 95, 76 |
Conread position: | 548-669 |
Cow position: | chr25:16922038-16921911 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 102 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 548-669 |
Cow position: | chr25:17658371-17658492 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 106 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 98, 12 |
Conread position: | 548-669 |
Cow position: | chr25:17712290-17712410 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 102 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 548-669 |
Cow position: | chr25:18293513-18293629 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 97, 12 |
Conread position: | 548-669 |
Cow position: | chr25:18935119-18934993 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 101 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 13, 74 |
Conread position: | 548-669 |
Cow position: | chr25:26087271-26087398 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 104 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 548-669 |
Cow position: | chr25:26238627-26238750 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 104 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 96, 76 |
Conread position: | 548-669 |
Cow position: | chr25:26700796-26700916 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 100 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 95, 11 |
Conread position: | 548-669 |
Cow position: | chr25:30319693-30319570 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 103 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 96, 76 |
Conread position: | 548-669 |
Cow position: | chr25:33691310-33691436 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 102 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 78, 12 |
Conread position: | 548-669 |
Cow position: | chr25:33839144-33839257 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 100 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 548-670 |
Cow position: | chr25:7800892-7801020 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 102 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 548-672 |
Cow position: | chr25:21950882-21951008 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 102 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 84, 76 |
Conread position: | 548-677 |
Cow position: | chr25:10137854-10137985 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 105 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 96, 76 |
Conread position: | 548-678 |
Cow position: | chr25:18294558-18294429 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 103 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 7, 77 |
Conread position: | 548-678 |
Cow position: | chr25:20348614-20348747 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 105 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 89, 76 |
Conread position: | 548-684 |
Cow position: | chr25:21245850-21245713 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 113 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 98, 12 |
Conread position: | 549-669 |
Cow position: | chr25:7216585-7216710 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 102 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 549-669 |
Cow position: | chr25:21209191-21209065 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 102 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 549-669 |
Cow position: | chr25:40321535-40321410 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 102 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 90, 11 |
Conread position: | 550-647 |
Cow position: | chr25:33687138-33687042 (view UCSC Genome Browser custom track) |
Alignm length: | 98 |
Alignm identity: | 83 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 550-667 |
Cow position: | chr25:6003233-6003110 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 99 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 550-669 |
Cow position: | chr25:18490830-18490948 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 97 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 550-669 |
Cow position: | chr25:23829359-23829240 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 95, 33 |
Conread position: | 551-669 |
Cow position: | chr25:14791511-14791633 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 97 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 551-669 |
Cow position: | chr25:15254572-15254452 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 97 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 94, 73 |
Conread position: | 551-669 |
Cow position: | chr25:15377092-15377207 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 95 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 89, 0 |
Conread position: | 552-667 |
Cow position: | chr25:36119961-36120079 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 96 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 68, 80 |
Conread position: | 553-669 |
Cow position: | chr25:7329305-7329427 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 97 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 553-669 |
Cow position: | chr25:10746661-10746779 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 96 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 93, 68 |
Conread position: | 554-669 |
Cow position: | chr25:12778770-12778649 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 99 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 72, 0 |
Conread position: | 554-669 |
Cow position: | chr25:24452407-24452289 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 98 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 45, 20 |
Conread position: | 556-669 |
Cow position: | chr25:9642118-9642236 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 99 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 83, 67 |
Conread position: | 556-669 |
Cow position: | chr25:14266740-14266624 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 95 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 88, 68 |
Conread position: | 556-678 |
Cow position: | chr25:20402956-20402828 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 100 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 556-684 |
Cow position: | chr25:61421-61550 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 104 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 87, 68 |
Conread position: | 557-669 |
Cow position: | chr25:6474334-6474216 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 98 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 557-670 |
Cow position: | chr25:9396215-9396330 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 93 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 90, 67 |
Conread position: | 558-669 |
Cow position: | chr25:433314-433204 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 90 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 558-669 |
Cow position: | chr25:6256172-6256060 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 95 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 88, 41 |
Show alignments to all cow chromosomes.