Cow genome map
| Conread name: | Ss1.1-Emb1-C0005193_O22.5 |
| Conread position: | 540-669 |
| Cow position: | chr26:24280595-24280726 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 9, 85 |
| Conread position: | 541-669 |
| Cow position: | chr26:7525701-7525570 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 8, 84 |
| Conread position: | 542-669 |
| Cow position: | chr26:25393798-25393929 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 546-651 |
| Cow position: | chr26:6714510-6714406 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 546-668 |
| Cow position: | chr26:15857449-15857577 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 92, 78 |
| Conread position: | 546-669 |
| Cow position: | chr26:6793913-6794042 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 546-669 |
| Cow position: | chr26:9867341-9867219 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 98, 15 |
| Conread position: | 546-669 |
| Cow position: | chr26:18918297-18918177 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 548-658 |
| Cow position: | chr26:20182535-20182649 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 548-663 |
| Cow position: | chr26:2994897-2994784 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 548-664 |
| Cow position: | chr26:30034630-30034514 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 98, 76 |
| Conread position: | 548-667 |
| Cow position: | chr26:17057458-17057579 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 78, 12 |
| Conread position: | 548-667 |
| Cow position: | chr26:20291907-20291786 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 96, 76 |
| Conread position: | 548-668 |
| Cow position: | chr26:3182174-3182048 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 548-668 |
| Cow position: | chr26:8352734-8352859 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 12 |
| Conread position: | 548-669 |
| Cow position: | chr26:4585435-4585310 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 82, 76 |
| Conread position: | 548-669 |
| Cow position: | chr26:6793716-6793840 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 548-669 |
| Cow position: | chr26:6827941-6828067 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 93, 73 |
| Conread position: | 548-669 |
| Cow position: | chr26:9082452-9082336 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 548-669 |
| Cow position: | chr26:11263412-11263539 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 548-669 |
| Cow position: | chr26:13021374-13021247 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 548-669 |
| Cow position: | chr26:13270903-13270776 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 548-669 |
| Cow position: | chr26:14174071-14174198 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 90, 75 |
| Conread position: | 548-669 |
| Cow position: | chr26:16167138-16167017 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 96, 76 |
| Conread position: | 548-669 |
| Cow position: | chr26:19774528-19774405 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 93, 12 |
| Conread position: | 548-669 |
| Cow position: | chr26:23926203-23926088 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 548-669 |
| Cow position: | chr26:25737246-25737369 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 96, 76 |
| Conread position: | 548-669 |
| Cow position: | chr26:26294413-26294298 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 548-670 |
| Cow position: | chr26:12807741-12807617 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 91, 31 |
| Conread position: | 548-670 |
| Cow position: | chr26:28442230-28442111 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 98, 13 |
| Conread position: | 548-674 |
| Cow position: | chr26:31061975-31062103 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 97, 76 |
| Conread position: | 548-678 |
| Cow position: | chr26:22180275-22180411 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 548-678 |
| Cow position: | chr26:23600017-23599885 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 85, 76 |
| Conread position: | 548-681 |
| Cow position: | chr26:11134921-11134785 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 78, 42 |
| Conread position: | 549-678 |
| Cow position: | chr26:25442114-25441981 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 45, 65 |
| Conread position: | 550-669 |
| Cow position: | chr26:19459449-19459577 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 550-669 |
| Cow position: | chr26:32898094-32897973 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 96, 74 |
| Conread position: | 550-683 |
| Cow position: | chr26:28243842-28243711 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 95, 61 |
| Conread position: | 551-667 |
| Cow position: | chr26:30254856-30254743 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 94, 63 |
| Conread position: | 552-669 |
| Cow position: | chr26:21637258-21637135 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 552-683 |
| Cow position: | chr26:6006267-6006131 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 554-668 |
| Cow position: | chr26:8746052-8745931 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 554-669 |
| Cow position: | chr26:613891-613780 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 554-670 |
| Cow position: | chr26:5988940-5988827 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 555-684 |
| Cow position: | chr26:4363086-4363213 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 89, 72 |
| Conread position: | 556-669 |
| Cow position: | chr26:28319316-28319201 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 88, 68 |
| Conread position: | 557-669 |
| Cow position: | chr26:32652942-32652828 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 89, 67 |
| Conread position: | 561-669 |
| Cow position: | chr26:33567255-33567149 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 85, 63 |
| Conread position: | 565-669 |
| Cow position: | chr26:25526038-25526145 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
Show alignments to all cow chromosomes.