Cow genome map
| Conread name: | Ss1.1-Emb1-C0005194_C01.5 |
| Conread position: | 1-344 |
| Cow position: | chr10:9031321-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-666 |
| Cow position: | chr10:9010500-9009835 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 64 |
| Conread position: | 1-724 |
| Cow position: | chr10:9010584-9009861 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 150 |
| Conread position: | 1-760 |
| Cow position: | chr10:9031405-9032144 (view UCSC Genome Browser custom track) |
| Alignm length: | 771 |
| Alignm identity: | 441 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 431, 178 |
| Conread position: | 1-766 |
| Cow position: | chr10:8996688-8995932 (view UCSC Genome Browser custom track) |
| Alignm length: | 766 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 689, 0 |
| Conread position: | 1-767 |
| Cow position: | chr10:8996772-8996006 (view UCSC Genome Browser custom track) |
| Alignm length: | 769 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 61 |
| Conread position: | 2-459 |
| Cow position: | chr10:21939087-21938633 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 152, 156 |
| Conread position: | 6-428 |
| Cow position: | chr10:9031242-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 246 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 62, 69 |
| Conread position: | 9-768 |
| Cow position: | chr10:8996850-8996089 (view UCSC Genome Browser custom track) |
| Alignm length: | 763 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 379 |
| Conread position: | 35-761 |
| Cow position: | chr10:21939376-21938666 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 443 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 30, 19 |
| Conread position: | 55-768 |
| Cow position: | chr10:8996886-8996173 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 65-761 |
| Cow position: | chr10:21939192-21938496 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 425 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 178, 156 |
| Conread position: | 76-512 |
| Cow position: | chr10:9031228-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 82 |
| Conread position: | 84-768 |
| Cow position: | chr10:9010583-9009901 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 91-768 |
| Cow position: | chr10:8996934-8996257 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 141 |
| Conread position: | 160-596 |
| Cow position: | chr10:9031228-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 247 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 167-713 |
| Cow position: | chr10:21939174-21938631 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 337 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 230, 220 |
| Conread position: | 201-768 |
| Cow position: | chr10:21939378-21938825 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 339 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 244-680 |
| Cow position: | chr10:9031228-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 328-764 |
| Cow position: | chr10:9031228-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 77 |
| Conread position: | 412-768 |
| Cow position: | chr10:9031228-9031584 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 235 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 94, 86 |
Show alignments to all cow chromosomes.