Cow genome map

Conread name: Ss1.1-Emb1-C0005194_C01.5

Conread position: 1-184
Cow position: chr13:56291957-56291773 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 51

Conread position: 1-335
Cow position: chr13:56292125-56291790 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 224
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 264, 0

Conread position: 1-641
Cow position: chr13:56333705-56334352 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 586

Conread position: 1-760
Cow position: chr13:39984141-39984900 (view UCSC Genome Browser custom track)
Alignm length: 764
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 54

Conread position: 1-768
Cow position: chr13:39983973-39984740 (view UCSC Genome Browser custom track)
Alignm length: 770
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 223

Conread position: 1-768
Cow position: chr13:39984057-39984824 (view UCSC Genome Browser custom track)
Alignm length: 770
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 136

Conread position: 1-768
Cow position: chr13:56292624-56291862 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 104

Conread position: 1-768
Cow position: chr13:56292708-56291946 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 51

Conread position: 2-584
Cow position: chr13:39930638-39931217 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 63

Conread position: 2-730
Cow position: chr13:24162729-24163457 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 427
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 95, 88

Conread position: 3-755
Cow position: chr13:56292537-56291790 (view UCSC Genome Browser custom track)
Alignm length: 762
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 21

Conread position: 14-477
Cow position: chr13:29183654-29183201 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 288
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 40, 49

Conread position: 14-768
Cow position: chr13:39983902-39984656 (view UCSC Genome Browser custom track)
Alignm length: 759
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 291

Conread position: 20-702
Cow position: chr13:56333640-56334329 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 418
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 45, 55

Conread position: 24-768
Cow position: chr13:56292848-56292114 (view UCSC Genome Browser custom track)
Alignm length: 757
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 36

Conread position: 59-601
Cow position: chr13:39930611-39931153 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 171

Conread position: 60-768
Cow position: chr13:56333512-56334229 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 536, 0

Conread position: 65-752
Cow position: chr13:22125150-22125837 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 408
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 174, 178

Conread position: 65-752
Cow position: chr13:24162876-24163563 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 405
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 174, 178

Conread position: 65-768
Cow position: chr13:22124898-22125601 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 203

Conread position: 74-509
Cow position: chr13:56317325-56317752 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 263
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 236, 149

Conread position: 92-768
Cow position: chr13:39983812-39984488 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 391, 379

Conread position: 158-729
Cow position: chr13:29183759-29183201 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 338
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 182, 48

Conread position: 161-710
Cow position: chr13:39930629-39931176 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 69

Conread position: 166-765
Cow position: chr13:56292875-56292274 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 100

Conread position: 201-768
Cow position: chr13:39930585-39931152 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 211-726
Cow position: chr13:56317294-56317804 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 308
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 281, 176

Conread position: 242-552
Cow position: chr13:56317930-56318240 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 196
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 76

Conread position: 242-762
Cow position: chr13:29183759-29183243 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 318
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 50, 43

Conread position: 284-768
Cow position: chr13:39930584-39931068 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 298-768
Cow position: chr13:22124711-22125181 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 288
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 22, 29

Conread position: 482-767
Cow position: chr13:39983781-39984067 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 188
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 159

Show alignments to all cow chromosomes.