Cow genome map
Conread name: | Ss1.1-Emb1-C0005194_C01.5 |
Conread position: | 1-184 |
Cow position: | chr13:56291957-56291773 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 131 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 59, 51 |
Conread position: | 1-335 |
Cow position: | chr13:56292125-56291790 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 224 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 264, 0 |
Conread position: | 1-641 |
Cow position: | chr13:56333705-56334352 (view UCSC Genome Browser custom track) |
Alignm length: | 651 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 341, 586 |
Conread position: | 1-760 |
Cow position: | chr13:39984141-39984900 (view UCSC Genome Browser custom track) |
Alignm length: | 764 |
Alignm identity: | 485 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 54 |
Conread position: | 1-768 |
Cow position: | chr13:39983973-39984740 (view UCSC Genome Browser custom track) |
Alignm length: | 770 |
Alignm identity: | 482 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 233, 223 |
Conread position: | 1-768 |
Cow position: | chr13:39984057-39984824 (view UCSC Genome Browser custom track) |
Alignm length: | 770 |
Alignm identity: | 485 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 136 |
Conread position: | 1-768 |
Cow position: | chr13:56292624-56291862 (view UCSC Genome Browser custom track) |
Alignm length: | 778 |
Alignm identity: | 504 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 104 |
Conread position: | 1-768 |
Cow position: | chr13:56292708-56291946 (view UCSC Genome Browser custom track) |
Alignm length: | 778 |
Alignm identity: | 500 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 51 |
Conread position: | 2-584 |
Cow position: | chr13:39930638-39931217 (view UCSC Genome Browser custom track) |
Alignm length: | 586 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 63 |
Conread position: | 2-730 |
Cow position: | chr13:24162729-24163457 (view UCSC Genome Browser custom track) |
Alignm length: | 731 |
Alignm identity: | 427 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 95, 88 |
Conread position: | 3-755 |
Cow position: | chr13:56292537-56291790 (view UCSC Genome Browser custom track) |
Alignm length: | 762 |
Alignm identity: | 494 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 21 |
Conread position: | 14-477 |
Cow position: | chr13:29183654-29183201 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 288 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 40, 49 |
Conread position: | 14-768 |
Cow position: | chr13:39983902-39984656 (view UCSC Genome Browser custom track) |
Alignm length: | 759 |
Alignm identity: | 467 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 301, 291 |
Conread position: | 20-702 |
Cow position: | chr13:56333640-56334329 (view UCSC Genome Browser custom track) |
Alignm length: | 695 |
Alignm identity: | 418 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 45, 55 |
Conread position: | 24-768 |
Cow position: | chr13:56292848-56292114 (view UCSC Genome Browser custom track) |
Alignm length: | 757 |
Alignm identity: | 475 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 36 |
Conread position: | 59-601 |
Cow position: | chr13:39930611-39931153 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 175, 171 |
Conread position: | 60-768 |
Cow position: | chr13:56333512-56334229 (view UCSC Genome Browser custom track) |
Alignm length: | 718 |
Alignm identity: | 433 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 536, 0 |
Conread position: | 65-752 |
Cow position: | chr13:22125150-22125837 (view UCSC Genome Browser custom track) |
Alignm length: | 692 |
Alignm identity: | 408 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 174, 178 |
Conread position: | 65-752 |
Cow position: | chr13:24162876-24163563 (view UCSC Genome Browser custom track) |
Alignm length: | 692 |
Alignm identity: | 405 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 174, 178 |
Conread position: | 65-768 |
Cow position: | chr13:22124898-22125601 (view UCSC Genome Browser custom track) |
Alignm length: | 707 |
Alignm identity: | 418 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 203 |
Conread position: | 74-509 |
Cow position: | chr13:56317325-56317752 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 263 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 236, 149 |
Conread position: | 92-768 |
Cow position: | chr13:39983812-39984488 (view UCSC Genome Browser custom track) |
Alignm length: | 678 |
Alignm identity: | 422 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 391, 379 |
Conread position: | 158-729 |
Cow position: | chr13:29183759-29183201 (view UCSC Genome Browser custom track) |
Alignm length: | 576 |
Alignm identity: | 338 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 182, 48 |
Conread position: | 161-710 |
Cow position: | chr13:39930629-39931176 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 69 |
Conread position: | 166-765 |
Cow position: | chr13:56292875-56292274 (view UCSC Genome Browser custom track) |
Alignm length: | 611 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 100 |
Conread position: | 201-768 |
Cow position: | chr13:39930585-39931152 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 211-726 |
Cow position: | chr13:56317294-56317804 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 308 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 281, 176 |
Conread position: | 242-552 |
Cow position: | chr13:56317930-56318240 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 196 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 54, 76 |
Conread position: | 242-762 |
Cow position: | chr13:29183759-29183243 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 318 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 50, 43 |
Conread position: | 284-768 |
Cow position: | chr13:39930584-39931068 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 298-768 |
Cow position: | chr13:22124711-22125181 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 288 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 22, 29 |
Conread position: | 482-767 |
Cow position: | chr13:39983781-39984067 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 188 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 8, 159 |
Show alignments to all cow chromosomes.