Cow genome map
Conread name: | Ss1.1-Emb1-C0005194_C01.5 |
Conread position: | 1-278 |
Cow position: | chr24:17070785-17071062 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 199 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 66, 61 |
Conread position: | 1-349 |
Cow position: | chr24:17077851-17077503 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 225 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 153, 158 |
Conread position: | 1-418 |
Cow position: | chr24:17077935-17077518 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-521 |
Cow position: | chr24:17070533-17071053 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 311, 304 |
Conread position: | 1-762 |
Cow position: | chr24:17035884-17035123 (view UCSC Genome Browser custom track) |
Alignm length: | 762 |
Alignm identity: | 492 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-768 |
Cow position: | chr24:17035716-17034949 (view UCSC Genome Browser custom track) |
Alignm length: | 769 |
Alignm identity: | 483 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 388, 382 |
Conread position: | 1-768 |
Cow position: | chr24:17035800-17035033 (view UCSC Genome Browser custom track) |
Alignm length: | 770 |
Alignm identity: | 497 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 388, 378 |
Conread position: | 1-768 |
Cow position: | chr24:17036472-17035705 (view UCSC Genome Browser custom track) |
Alignm length: | 769 |
Alignm identity: | 493 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 732, 726 |
Conread position: | 2-762 |
Cow position: | chr24:17078270-17077510 (view UCSC Genome Browser custom track) |
Alignm length: | 761 |
Alignm identity: | 458 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 2-768 |
Cow position: | chr24:17035967-17035201 (view UCSC Genome Browser custom track) |
Alignm length: | 769 |
Alignm identity: | 500 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 226, 221 |
Conread position: | 2-768 |
Cow position: | chr24:17036051-17035285 (view UCSC Genome Browser custom track) |
Alignm length: | 769 |
Alignm identity: | 501 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 325, 305 |
Conread position: | 2-768 |
Cow position: | chr24:17036219-17035453 (view UCSC Genome Browser custom track) |
Alignm length: | 769 |
Alignm identity: | 493 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 395, 384 |
Conread position: | 2-768 |
Cow position: | chr24:17036303-17035537 (view UCSC Genome Browser custom track) |
Alignm length: | 769 |
Alignm identity: | 504 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 479, 472 |
Conread position: | 2-768 |
Cow position: | chr24:17036387-17035621 (view UCSC Genome Browser custom track) |
Alignm length: | 770 |
Alignm identity: | 511 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 387, 381 |
Conread position: | 5-768 |
Cow position: | chr24:17078351-17077588 (view UCSC Genome Browser custom track) |
Alignm length: | 764 |
Alignm identity: | 457 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 10-768 |
Cow position: | chr24:17036547-17035789 (view UCSC Genome Browser custom track) |
Alignm length: | 760 |
Alignm identity: | 495 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 720, 716 |
Conread position: | 11-426 |
Cow position: | chr24:17070627-17071042 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 210 |
Conread position: | 12-234 |
Cow position: | chr24:16986431-16986653 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 147 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 29, 36 |
Conread position: | 25-353 |
Cow position: | chr24:17013178-17013506 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 209 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 35-727 |
Cow position: | chr24:17078153-17077462 (view UCSC Genome Browser custom track) |
Alignm length: | 694 |
Alignm identity: | 464 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 355, 348 |
Conread position: | 38-594 |
Cow position: | chr24:17070487-17071042 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 358, 25 |
Conread position: | 73-767 |
Cow position: | chr24:17070352-17071047 (view UCSC Genome Browser custom track) |
Alignm length: | 700 |
Alignm identity: | 456 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 51 |
Conread position: | 74-689 |
Cow position: | chr24:17070438-17071053 (view UCSC Genome Browser custom track) |
Alignm length: | 618 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 322, 303 |
Conread position: | 78-435 |
Cow position: | chr24:17013147-17013504 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 237 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 155, 143 |
Conread position: | 110-768 |
Cow position: | chr24:17036612-17035957 (view UCSC Genome Browser custom track) |
Alignm length: | 662 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 25 |
Conread position: | 180-467 |
Cow position: | chr24:17013165-17013452 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 192 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 201-768 |
Cow position: | chr24:17070399-17070964 (view UCSC Genome Browser custom track) |
Alignm length: | 569 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 447, 11 |
Conread position: | 246-616 |
Cow position: | chr24:17013147-17013516 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 236 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 150, 134 |
Conread position: | 261-487 |
Cow position: | chr24:16986428-16986654 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 157 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 135, 121 |
Conread position: | 330-709 |
Cow position: | chr24:17013147-17013525 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 250 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 170, 177 |
Conread position: | 414-768 |
Cow position: | chr24:17013147-17013501 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 233 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 446-654 |
Cow position: | chr24:16986445-16986653 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 140 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 62, 56 |
Conread position: | 530-768 |
Cow position: | chr24:17070390-17070628 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 157 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 536-728 |
Cow position: | chr24:16986451-16986643 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 131 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 113, 91 |
Show alignments to all cow chromosomes.