Cow genome map

Conread name: Ss1.1-Emb1-C0005194_C01.5

Conread position: 1-278
Cow position: chr24:17070785-17071062 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 66, 61

Conread position: 1-349
Cow position: chr24:17077851-17077503 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 225
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 153, 158

Conread position: 1-418
Cow position: chr24:17077935-17077518 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-521
Cow position: chr24:17070533-17071053 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 304

Conread position: 1-762
Cow position: chr24:17035884-17035123 (view UCSC Genome Browser custom track)
Alignm length: 762
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-768
Cow position: chr24:17035716-17034949 (view UCSC Genome Browser custom track)
Alignm length: 769
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 388, 382

Conread position: 1-768
Cow position: chr24:17035800-17035033 (view UCSC Genome Browser custom track)
Alignm length: 770
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 388, 378

Conread position: 1-768
Cow position: chr24:17036472-17035705 (view UCSC Genome Browser custom track)
Alignm length: 769
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 732, 726

Conread position: 2-762
Cow position: chr24:17078270-17077510 (view UCSC Genome Browser custom track)
Alignm length: 761
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-768
Cow position: chr24:17035967-17035201 (view UCSC Genome Browser custom track)
Alignm length: 769
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 221

Conread position: 2-768
Cow position: chr24:17036051-17035285 (view UCSC Genome Browser custom track)
Alignm length: 769
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 305

Conread position: 2-768
Cow position: chr24:17036219-17035453 (view UCSC Genome Browser custom track)
Alignm length: 769
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 395, 384

Conread position: 2-768
Cow position: chr24:17036303-17035537 (view UCSC Genome Browser custom track)
Alignm length: 769
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 479, 472

Conread position: 2-768
Cow position: chr24:17036387-17035621 (view UCSC Genome Browser custom track)
Alignm length: 770
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 387, 381

Conread position: 5-768
Cow position: chr24:17078351-17077588 (view UCSC Genome Browser custom track)
Alignm length: 764
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-768
Cow position: chr24:17036547-17035789 (view UCSC Genome Browser custom track)
Alignm length: 760
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 720, 716

Conread position: 11-426
Cow position: chr24:17070627-17071042 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 210

Conread position: 12-234
Cow position: chr24:16986431-16986653 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 147
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 36

Conread position: 25-353
Cow position: chr24:17013178-17013506 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 209
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 35-727
Cow position: chr24:17078153-17077462 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 348

Conread position: 38-594
Cow position: chr24:17070487-17071042 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 25

Conread position: 73-767
Cow position: chr24:17070352-17071047 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 51

Conread position: 74-689
Cow position: chr24:17070438-17071053 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 303

Conread position: 78-435
Cow position: chr24:17013147-17013504 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 237
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 155, 143

Conread position: 110-768
Cow position: chr24:17036612-17035957 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 25

Conread position: 180-467
Cow position: chr24:17013165-17013452 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 192
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 201-768
Cow position: chr24:17070399-17070964 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 447, 11

Conread position: 246-616
Cow position: chr24:17013147-17013516 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 236
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 150, 134

Conread position: 261-487
Cow position: chr24:16986428-16986654 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 135, 121

Conread position: 330-709
Cow position: chr24:17013147-17013525 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 250
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 170, 177

Conread position: 414-768
Cow position: chr24:17013147-17013501 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 233
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 446-654
Cow position: chr24:16986445-16986653 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 140
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 56

Conread position: 530-768
Cow position: chr24:17070390-17070628 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 157
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 536-728
Cow position: chr24:16986451-16986643 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 113, 91

Show alignments to all cow chromosomes.