Cow genome map
| Conread name: | Ss1.1-Emb1-C0005194_C01.5 |
| Conread position: | 1-426 |
| Cow position: | chr3:62721999-62721574 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 222 |
| Conread position: | 1-583 |
| Cow position: | chr3:62722167-62721585 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 396, 390 |
| Conread position: | 1-602 |
| Cow position: | chr3:77351166-77350576 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 8 |
| Conread position: | 1-676 |
| Cow position: | chr3:68027082-68027757 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 388, 379 |
| Conread position: | 1-684 |
| Cow position: | chr3:68045675-68046356 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 667, 0 |
| Conread position: | 1-729 |
| Cow position: | chr3:62742767-62743474 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 132 |
| Conread position: | 1-768 |
| Cow position: | chr3:62742352-62743098 (view UCSC Genome Browser custom track) |
| Alignm length: | 770 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 535, 289 |
| Conread position: | 2-280 |
| Cow position: | chr3:77350837-77350564 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 50, 58 |
| Conread position: | 2-520 |
| Cow position: | chr3:62722082-62721564 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 311, 305 |
| Conread position: | 6-768 |
| Cow position: | chr3:68026919-68027681 (view UCSC Genome Browser custom track) |
| Alignm length: | 765 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 654, 639 |
| Conread position: | 7-768 |
| Cow position: | chr3:68045598-68046356 (view UCSC Genome Browser custom track) |
| Alignm length: | 764 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 13 |
| Conread position: | 11-465 |
| Cow position: | chr3:77350912-77350471 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 114, 127 |
| Conread position: | 11-688 |
| Cow position: | chr3:62722241-62721564 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 212 |
| Conread position: | 11-768 |
| Cow position: | chr3:62742279-62743026 (view UCSC Genome Browser custom track) |
| Alignm length: | 762 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 53 |
| Conread position: | 11-768 |
| Cow position: | chr3:62742695-62743429 (view UCSC Genome Browser custom track) |
| Alignm length: | 761 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 43 |
| Conread position: | 24-723 |
| Cow position: | chr3:68027021-68027720 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 21 |
| Conread position: | 24-762 |
| Cow position: | chr3:62722312-62721574 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 283 |
| Conread position: | 30-768 |
| Cow position: | chr3:77351305-77350578 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 39 |
| Conread position: | 33-508 |
| Cow position: | chr3:62743035-62743505 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 52-768 |
| Cow position: | chr3:62722369-62721652 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 56-768 |
| Cow position: | chr3:68045562-68046274 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 168 |
| Conread position: | 59-766 |
| Cow position: | chr3:62742242-62742945 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 81 |
| Conread position: | 72-549 |
| Cow position: | chr3:77350935-77350471 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 298 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 233, 0 |
| Conread position: | 150-768 |
| Cow position: | chr3:62742250-62742862 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 497, 103 |
Show alignments to all cow chromosomes.