Cow genome map
| Conread name: | Ss1.1-Emb1-C0005194_C01.5 |
| Conread position: | 1-382 |
| Cow position: | chrX:29045753-29045372 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 361, 301 |
| Conread position: | 1-623 |
| Cow position: | chrX:29045270-29044648 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-702 |
| Cow position: | chrX:25309880-25310581 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 153 |
| Conread position: | 1-720 |
| Cow position: | chrX:12627345-12628062 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 439 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 40, 60 |
| Conread position: | 1-751 |
| Cow position: | chrX:25324925-25324179 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 388, 382 |
| Conread position: | 1-766 |
| Cow position: | chrX:25325093-25324328 (view UCSC Genome Browser custom track) |
| Alignm length: | 768 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 196 |
| Conread position: | 1-768 |
| Cow position: | chrX:25325009-25324242 (view UCSC Genome Browser custom track) |
| Alignm length: | 773 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 325, 314 |
| Conread position: | 1-768 |
| Cow position: | chrX:25325177-25324410 (view UCSC Genome Browser custom track) |
| Alignm length: | 769 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 142 |
| Conread position: | 1-768 |
| Cow position: | chrX:25325261-25324494 (view UCSC Genome Browser custom track) |
| Alignm length: | 769 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 392, 385 |
| Conread position: | 1-768 |
| Cow position: | chrX:25325345-25324578 (view UCSC Genome Browser custom track) |
| Alignm length: | 772 |
| Alignm identity: | 548 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 70 |
| Conread position: | 1-768 |
| Cow position: | chrX:25325429-25324662 (view UCSC Genome Browser custom track) |
| Alignm length: | 769 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 154 |
| Conread position: | 1-768 |
| Cow position: | chrX:25325513-25324746 (view UCSC Genome Browser custom track) |
| Alignm length: | 769 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 144 |
| Conread position: | 1-768 |
| Cow position: | chrX:25325765-25324998 (view UCSC Genome Browser custom track) |
| Alignm length: | 770 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 378, 388 |
| Conread position: | 2-558 |
| Cow position: | chrX:13826789-13826233 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 323 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 138, 146 |
| Conread position: | 2-768 |
| Cow position: | chrX:25309713-25310479 (view UCSC Genome Browser custom track) |
| Alignm length: | 770 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 457, 475 |
| Conread position: | 2-768 |
| Cow position: | chrX:25309797-25310563 (view UCSC Genome Browser custom track) |
| Alignm length: | 767 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-768 |
| Cow position: | chrX:25325595-25324830 (view UCSC Genome Browser custom track) |
| Alignm length: | 769 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 136 |
| Conread position: | 8-711 |
| Cow position: | chrX:14181645-14180942 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 406 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 44, 53 |
| Conread position: | 9-768 |
| Cow position: | chrX:25325843-25325082 (view UCSC Genome Browser custom track) |
| Alignm length: | 764 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 38 |
| Conread position: | 26-721 |
| Cow position: | chrX:13826933-13826238 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 424 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 271, 289 |
| Conread position: | 38-701 |
| Cow position: | chrX:29045316-29044654 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 29 |
| Conread position: | 39-768 |
| Cow position: | chrX:25309667-25310395 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 72-768 |
| Cow position: | chrX:29045850-29045175 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 413, 393 |
| Conread position: | 74-768 |
| Cow position: | chrX:12627334-12628026 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 420 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 54, 72 |
| Conread position: | 75-768 |
| Cow position: | chrX:25325859-25325166 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 21 |
| Conread position: | 75-768 |
| Cow position: | chrX:29045361-29044671 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 29 |
| Conread position: | 76-768 |
| Cow position: | chrX:25325606-25324914 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 326, 310 |
| Conread position: | 277-722 |
| Cow position: | chrX:13826934-13826489 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 260 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 402-765 |
| Cow position: | chrX:25325868-25325505 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 237 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 84, 77 |
| Conread position: | 484-768 |
| Cow position: | chrX:29045858-29045574 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.