Cow genome map
| Conread name: | Ss1.1-Emb1-C0005194_J10.5 |
| Conread position: | 2-288 |
| Cow position: | chr2:78754132-78754419 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 24, 64 |
| Conread position: | 7-294 |
| Cow position: | chr2:78754473-78754755 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 8-301 |
| Cow position: | chr2:78755129-78755421 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 208 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 90, 95 |
| Conread position: | 8-303 |
| Cow position: | chr2:78755380-78755674 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 203 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 9-304 |
| Cow position: | chr2:78755046-78755342 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 205 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 287, 0 |
| Conread position: | 17-274 |
| Cow position: | chr2:82799664-82799921 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-294 |
| Cow position: | chr2:82799496-82799773 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 87, 75 |
| Conread position: | 17-294 |
| Cow position: | chr2:82799580-82799857 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 80, 64 |
| Conread position: | 17-294 |
| Cow position: | chr2:82799748-82800025 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-301 |
| Cow position: | chr2:78754886-78755170 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-301 |
| Cow position: | chr2:82800000-82800284 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 126, 118 |
| Conread position: | 17-320 |
| Cow position: | chr2:78755640-78755944 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 124, 27 |
| Conread position: | 18-285 |
| Cow position: | chr2:78755807-78756075 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 10, 5 |
| Conread position: | 18-294 |
| Cow position: | chr2:78755223-78755498 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 80, 85 |
| Conread position: | 18-301 |
| Cow position: | chr2:78754971-78755254 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-316 |
| Cow position: | chr2:78755307-78755605 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 280, 31 |
| Conread position: | 22-294 |
| Cow position: | chr2:82799837-82800109 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 56, 63 |
| Conread position: | 25-303 |
| Cow position: | chr2:82799420-82799698 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 16, 5 |
| Conread position: | 27-294 |
| Cow position: | chr2:48689477-48689211 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 27-294 |
| Cow position: | chr2:82800178-82800445 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 48, 55 |
| Conread position: | 27-303 |
| Cow position: | chr2:82800094-82800370 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 28-305 |
| Cow position: | chr2:78756070-78756347 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 75, 44 |
| Conread position: | 29-292 |
| Cow position: | chr2:78755734-78755997 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 63, 83 |
| Conread position: | 35-301 |
| Cow position: | chr2:78754820-78755086 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 39-294 |
| Cow position: | chr2:82799938-82800193 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 66-301 |
| Cow position: | chr2:78754116-78754348 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 37, 18 |
| Conread position: | 111-342 |
| Cow position: | chr2:78754812-78755047 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 187, 0 |
Show alignments to all cow chromosomes.