Cow genome map
| Conread name: | Ss1.1-Emb1-C0005194_J10.5 |
| Conread position: | 1-292 |
| Cow position: | chr24:17036005-17035714 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-288 |
| Cow position: | chr24:17077885-17077601 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-257 |
| Cow position: | chr24:17035496-17035245 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-303 |
| Cow position: | chr24:17035664-17035367 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 106, 86 |
| Conread position: | 9-285 |
| Cow position: | chr24:17035746-17035469 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 12-303 |
| Cow position: | chr24:17036579-17036291 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 13-288 |
| Cow position: | chr24:17036497-17036222 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-288 |
| Cow position: | chr24:17078044-17077769 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-294 |
| Cow position: | chr24:17070760-17071041 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 85, 78 |
| Conread position: | 13-303 |
| Cow position: | chr24:17013213-17013503 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-303 |
| Cow position: | chr24:17035401-17035115 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-294 |
| Cow position: | chr24:17035904-17035628 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 85, 73 |
| Conread position: | 18-294 |
| Cow position: | chr24:17036072-17035796 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-294 |
| Cow position: | chr24:17036324-17036048 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-294 |
| Cow position: | chr24:17070681-17070957 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-294 |
| Cow position: | chr24:17077955-17077679 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 27-216 |
| Cow position: | chr24:17070858-17071047 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 27-234 |
| Cow position: | chr24:17036399-17036192 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 27-242 |
| Cow position: | chr24:17013311-17013525 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 196, 0 |
| Conread position: | 27-292 |
| Cow position: | chr24:17070522-17070787 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 221, 226 |
| Conread position: | 27-294 |
| Cow position: | chr24:17035559-17035292 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 27-294 |
| Cow position: | chr24:17036147-17035880 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 27-301 |
| Cow position: | chr24:17035307-17035033 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 27-304 |
| Cow position: | chr24:17036231-17035952 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 257, 0 |
| Conread position: | 27-307 |
| Cow position: | chr24:17035811-17035529 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 77, 65 |
| Conread position: | 33-256 |
| Cow position: | chr24:17013149-17013372 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 33-294 |
| Cow position: | chr24:17070444-17070705 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 72-294 |
| Cow position: | chr24:17078153-17077931 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.