Cow genome map
Conread name: | Ss1.1-Emb1-C0005194_J10.5 |
Conread position: | 1-210 |
Cow position: | chr28:7758125-7758334 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 140 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-271 |
Cow position: | chr28:7757873-7758143 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 189 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-288 |
Cow position: | chr28:9299258-9299545 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 193 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-292 |
Cow position: | chr28:7757957-7758248 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 195 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-297 |
Cow position: | chr28:9253308-9253604 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-301 |
Cow position: | chr28:7757621-7757921 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-301 |
Cow position: | chr28:7758529-7758828 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 197 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 149, 156 |
Conread position: | 1-301 |
Cow position: | chr28:9253056-9253356 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-303 |
Cow position: | chr28:7810385-7810678 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 202 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 138, 0 |
Conread position: | 1-303 |
Cow position: | chr28:9298605-9298904 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 207 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 1-313 |
Cow position: | chr28:9298854-9299166 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 215 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 97, 90 |
Conread position: | 3-301 |
Cow position: | chr28:9253142-9253440 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 205 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 5-293 |
Cow position: | chr28:9298691-9298978 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 188 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 127, 0 |
Conread position: | 6-294 |
Cow position: | chr28:7810306-7810585 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 201 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 229, 0 |
Conread position: | 6-342 |
Cow position: | chr28:7757710-7758050 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 281, 0 |
Conread position: | 7-303 |
Cow position: | chr28:9252893-9253190 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 200 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 7-318 |
Cow position: | chr28:7810475-7810779 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 218 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 289, 50 |
Conread position: | 9-236 |
Cow position: | chr28:7810720-7810947 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 160 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 9-294 |
Cow position: | chr28:7757461-7757746 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 198 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 42, 56 |
Conread position: | 9-294 |
Cow position: | chr28:9252980-9253265 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 9-294 |
Cow position: | chr28:9253232-9253517 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 9-301 |
Cow position: | chr28:9290133-9290420 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 201 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 9-303 |
Cow position: | chr28:7758453-7758747 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 204 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 9-304 |
Cow position: | chr28:9289962-9290258 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 195 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 90, 161 |
Conread position: | 9-313 |
Cow position: | chr28:7810552-7810858 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 199 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 285, 0 |
Conread position: | 13-221 |
Cow position: | chr28:9253404-9253612 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 146 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 13-290 |
Cow position: | chr28:9299438-9299712 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 181 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 190, 123 |
Conread position: | 13-304 |
Cow position: | chr28:11333668-11333381 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 191 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 283, 200 |
Conread position: | 14-284 |
Cow position: | chr28:34696299-34696568 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 174 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 15-294 |
Cow position: | chr28:9290221-9290496 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 190 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 17-273 |
Cow position: | chr28:33210365-33210622 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 167 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 196, 0 |
Conread position: | 17-292 |
Cow position: | chr28:7757385-7757660 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 186 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 17-294 |
Cow position: | chr28:7758057-7758334 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 190 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 17-335 |
Cow position: | chr28:7757805-7758124 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 217 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 154, 160 |
Conread position: | 25-281 |
Cow position: | chr28:11333908-11333652 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 176 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 73, 67 |
Conread position: | 27-241 |
Cow position: | chr28:9290481-9290695 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 142 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 27-294 |
Cow position: | chr28:7758387-7758654 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 183 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 27-294 |
Cow position: | chr28:11333990-11333723 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 173 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 28-294 |
Cow position: | chr28:11334073-11333807 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 167 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 29-294 |
Cow position: | chr28:7810656-7810921 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 186 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 29-313 |
Cow position: | chr28:9290400-9290685 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 190 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 240, 64 |
Conread position: | 45-293 |
Cow position: | chr28:9299218-9299466 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 165 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 58-301 |
Cow position: | chr28:7758334-7758577 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 139 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 63-257 |
Cow position: | chr28:34673370-34673564 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 134 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 67-294 |
Cow position: | chr28:7810283-7810510 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 161 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 69-294 |
Cow position: | chr28:33210333-33210558 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 147 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 93, 109 |
Conread position: | 94-301 |
Cow position: | chr28:9299186-9299390 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 139 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 113-316 |
Cow position: | chr28:7757397-7757602 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 142 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 174, 0 |
Show alignments to all cow chromosomes.