Cow genome map

Conread name: Ss1.1-Emb1-C0005194_J10.5

Conread position: 1-210
Cow position: chr28:7758125-7758334 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 140
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-271
Cow position: chr28:7757873-7758143 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 189
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 1-288
Cow position: chr28:9299258-9299545 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 193
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 1-292
Cow position: chr28:7757957-7758248 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 195
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 1-297
Cow position: chr28:9253308-9253604 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-301
Cow position: chr28:7757621-7757921 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-301
Cow position: chr28:7758529-7758828 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 197
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 149, 156

Conread position: 1-301
Cow position: chr28:9253056-9253356 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-303
Cow position: chr28:7810385-7810678 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 202
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 138, 0

Conread position: 1-303
Cow position: chr28:9298605-9298904 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 207
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 63, 0

Conread position: 1-313
Cow position: chr28:9298854-9299166 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 215
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 97, 90

Conread position: 3-301
Cow position: chr28:9253142-9253440 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 205
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 5-293
Cow position: chr28:9298691-9298978 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 188
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 127, 0

Conread position: 6-294
Cow position: chr28:7810306-7810585 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 229, 0

Conread position: 6-342
Cow position: chr28:7757710-7758050 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 0

Conread position: 7-303
Cow position: chr28:9252893-9253190 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 200
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 44, 0

Conread position: 7-318
Cow position: chr28:7810475-7810779 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 218
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 289, 50

Conread position: 9-236
Cow position: chr28:7810720-7810947 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 9-294
Cow position: chr28:7757461-7757746 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 198
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 42, 56

Conread position: 9-294
Cow position: chr28:9252980-9253265 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 9-294
Cow position: chr28:9253232-9253517 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 9-301
Cow position: chr28:9290133-9290420 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 201
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 75, 0

Conread position: 9-303
Cow position: chr28:7758453-7758747 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 204
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 9-304
Cow position: chr28:9289962-9290258 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 195
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 90, 161

Conread position: 9-313
Cow position: chr28:7810552-7810858 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 199
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 285, 0

Conread position: 13-221
Cow position: chr28:9253404-9253612 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 13-290
Cow position: chr28:9299438-9299712 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 181
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 190, 123

Conread position: 13-304
Cow position: chr28:11333668-11333381 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 191
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 283, 200

Conread position: 14-284
Cow position: chr28:34696299-34696568 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 174
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 15-294
Cow position: chr28:9290221-9290496 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 190
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 22, 0

Conread position: 17-273
Cow position: chr28:33210365-33210622 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 167
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 196, 0

Conread position: 17-292
Cow position: chr28:7757385-7757660 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 186
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 17-294
Cow position: chr28:7758057-7758334 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 190
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 17-335
Cow position: chr28:7757805-7758124 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 217
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 154, 160

Conread position: 25-281
Cow position: chr28:11333908-11333652 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 73, 67

Conread position: 27-241
Cow position: chr28:9290481-9290695 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 27-294
Cow position: chr28:7758387-7758654 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 27-294
Cow position: chr28:11333990-11333723 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 173
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 28-294
Cow position: chr28:11334073-11333807 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 167
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 29-294
Cow position: chr28:7810656-7810921 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 186
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 29-313
Cow position: chr28:9290400-9290685 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 190
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 240, 64

Conread position: 45-293
Cow position: chr28:9299218-9299466 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 165
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 58-301
Cow position: chr28:7758334-7758577 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 139
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 63-257
Cow position: chr28:34673370-34673564 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 67-294
Cow position: chr28:7810283-7810510 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 69-294
Cow position: chr28:33210333-33210558 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 147
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 93, 109

Conread position: 94-301
Cow position: chr28:9299186-9299390 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 113-316
Cow position: chr28:7757397-7757602 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 174, 0

Show alignments to all cow chromosomes.