Cow genome map
| Conread name: | Ss1.1-Emb1-C0005194_J10.5 |
| Conread position: | 1-285 |
| Cow position: | chr6:49429189-49429473 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 14, 25 |
| Conread position: | 17-256 |
| Cow position: | chr6:49341213-49341451 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 227, 0 |
| Conread position: | 26-285 |
| Cow position: | chr6:49396193-49396446 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 246, 34 |
| Conread position: | 26-294 |
| Cow position: | chr6:49340886-49341154 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 26-303 |
| Cow position: | chr6:49340550-49340827 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 170, 165 |
| Conread position: | 26-303 |
| Cow position: | chr6:49340802-49341079 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 74, 67 |
| Conread position: | 27-292 |
| Cow position: | chr6:49340467-49340732 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 27-292 |
| Cow position: | chr6:49341055-49341320 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 189 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 239, 233 |
| Conread position: | 27-294 |
| Cow position: | chr6:49340719-49340986 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 187 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 27-294 |
| Cow position: | chr6:49396272-49396539 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 27-301 |
| Cow position: | chr6:49396608-49396882 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 46 |
| Conread position: | 27-303 |
| Cow position: | chr6:49340635-49340911 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 194 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 241, 231 |
| Conread position: | 27-304 |
| Cow position: | chr6:49341139-49341418 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 195 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 266, 0 |
| Conread position: | 116-292 |
| Cow position: | chr6:49340388-49340564 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.