Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Emb1-C0005195_K03.5
        

               Conread position:
               1-117
               

               Cow position:
               chr28:3311047-3311165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               54, 80
               

               Conread position:
               1-124
               

               Cow position:
               chr28:4588489-4588370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-124
               

               Cow position:
               chr28:21263328-21263209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-126
               

               Cow position:
               chr28:16856932-16857057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               53, 78
               

               Conread position:
               1-132
               

               Cow position:
               chr28:4866404-4866529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               1-132
               

               Cow position:
               chr28:8655992-8656122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               47, 24
               

               Conread position:
               1-132
               

               Cow position:
               chr28:16252234-16252361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-132
               

               Cow position:
               chr28:17620185-17620317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               43, 82
               

               Conread position:
               1-133
               

               Cow position:
               chr28:3759171-3759033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               35, 81
               

               Conread position:
               1-133
               

               Cow position:
               chr28:16200566-16200700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               54, 81
               

               Conread position:
               1-139
               

               Cow position:
               chr28:16569978-16569842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               63, 75
               

               Conread position:
               1-140
               

               Cow position:
               chr28:11562069-11562210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               54, 82
               

               Conread position:
               1-141
               

               Cow position:
               chr28:26867980-26868116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               60, 50
               

               Conread position:
               1-142
               

               Cow position:
               chr28:2151263-2151406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               9, 77
               

               Conread position:
               1-142
               

               Cow position:
               chr28:8936322-8936184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               1-152
               

               Cow position:
               chr28:11305461-11305611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               141, 49
               

               Conread position:
               1-155
               

               Cow position:
               chr28:5609744-5609896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               1-155
               

               Cow position:
               chr28:7964504-7964657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               1-157
               

               Cow position:
               chr28:22085371-22085523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-158
               

               Cow position:
               chr28:7413837-7413677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               55, 72
               

               Conread position:
               1-158
               

               Cow position:
               chr28:10196696-10196847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               1-160
               

               Cow position:
               chr28:2825596-2825435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               38, 80
               

               Conread position:
               1-162
               

               Cow position:
               chr28:10252741-10252903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               47, 79
               

               Conread position:
               1-165
               

               Cow position:
               chr28:2821435-2821262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               46, 72
               

               Conread position:
               1-165
               

               Cow position:
               chr28:32014959-32014793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               63, 79
               

               Conread position:
               1-166
               

               Cow position:
               chr28:7644918-7644750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               54, 80
               

               Conread position:
               1-169
               

               Cow position:
               chr28:117584-117756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               19, 82
               

               Conread position:
               1-169
               

               Cow position:
               chr28:3137727-3137550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-169
               

               Cow position:
               chr28:4074151-4073976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               50, 86
               

               Conread position:
               1-170
               

               Cow position:
               chr28:9109385-9109222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               1-173
               

               Cow position:
               chr28:19994772-19994943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               44, 136
               

               Conread position:
               1-176
               

               Cow position:
               chr28:4876612-4876443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-177
               

               Cow position:
               chr28:18608191-18608369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               49, 72
               

               Conread position:
               1-178
               

               Cow position:
               chr28:11411365-11411538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               147, 52
               

               Conread position:
               1-178
               

               Cow position:
               chr28:17727938-17728101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-179
               

               Cow position:
               chr28:5674046-5673872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               75, 44
               

               Conread position:
               1-180
               

               Cow position:
               chr28:5441723-5441901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               14, 57
               

               Conread position:
               1-180
               

               Cow position:
               chr28:30902295-30902122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               1-182
               

               Cow position:
               chr28:16879742-16879567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               1-184
               

               Cow position:
               chr28:7014628-7014445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               51, 80
               

               Conread position:
               1-184
               

               Cow position:
               chr28:7131917-7132095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               117, 51
               

               Conread position:
               1-184
               

               Cow position:
               chr28:8396503-8396327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-184
               

               Cow position:
               chr28:19127998-19128177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               46, 82
               

               Conread position:
               1-185
               

               Cow position:
               chr28:18797484-18797311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               1-186
               

               Cow position:
               chr28:15362752-15362569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-187
               

               Cow position:
               chr28:19038844-19039030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               149
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               64, 70
               

               Conread position:
               1-190
               

               Cow position:
               chr28:9384117-9384301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               86, 63
               

               Conread position:
               1-191
               

               Cow position:
               chr28:5232112-5231923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               1-191
               

               Cow position:
               chr28:13048107-13048298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               49, 82
               

               Conread position:
               1-191
               

               Cow position:
               chr28:20174012-20173821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               54, 82
               

               Conread position:
               1-193
               

               Cow position:
               chr28:4163406-4163595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               56, 81
               

               Conread position:
               1-198
               

               Cow position:
               chr28:11398620-11398818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               54, 81
               

               Conread position:
               1-198
               

               Cow position:
               chr28:11743654-11743840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               57, 13
               

               Conread position:
               1-201
               

               Cow position:
               chr28:777850-777651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               89, 74
               

               Conread position:
               1-201
               

               Cow position:
               chr28:3200636-3200435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               54, 81
               

               Conread position:
               1-201
               

               Cow position:
               chr28:6975408-6975217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-201
               

               Cow position:
               chr28:13133809-13133608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               54, 82
               

               Conread position:
               1-201
               

               Cow position:
               chr28:13356192-13356391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               48, 82
               

               Conread position:
               1-202
               

               Cow position:
               chr28:4006955-4006760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               89, 58
               

               Conread position:
               1-202
               

               Cow position:
               chr28:9705830-9705628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               13, 80
               

               Conread position:
               1-204
               

               Cow position:
               chr28:3410815-3411014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               104, 58
               

               Conread position:
               1-204
               

               Cow position:
               chr28:12991309-12991108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               155, 48
               

               Conread position:
               1-205
               

               Cow position:
               chr28:18770264-18770057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               43, 78
               

               Conread position:
               1-206
               

               Cow position:
               chr28:5255045-5254842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               196, 52
               

               Conread position:
               1-207
               

               Cow position:
               chr28:118788-118578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               19, 81
               

               Conread position:
               1-207
               

               Cow position:
               chr28:19216986-19216791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1-211
               

               Cow position:
               chr28:8827338-8827128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               44, 136
               

               Conread position:
               1-212
               

               Cow position:
               chr28:11987340-11987139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               57, 36
               

               Conread position:
               1-212
               

               Cow position:
               chr28:12055578-12055377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               57, 36
               

               Conread position:
               1-212
               

               Cow position:
               chr28:17739999-17739790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               167
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               59, 145
               

               Conread position:
               1-213
               

               Cow position:
               chr28:17680799-17680584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               55, 81
               

               Conread position:
               1-216
               

               Cow position:
               chr28:3445306-3445522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               73, 119
               

               Conread position:
               1-216
               

               Cow position:
               chr28:19015878-19015678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               58, 20
               

               Conread position:
               1-217
               

               Cow position:
               chr28:2279428-2279631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               205, 37
               

               Conread position:
               1-222
               

               Cow position:
               chr28:3726034-3726259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 77
               

               Conread position:
               1-227
               

               Cow position:
               chr28:34843398-34843625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               37, 82
               

               Conread position:
               1-228
               

               Cow position:
               chr28:5236048-5235830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               210, 74
               

               Conread position:
               1-229
               

               Cow position:
               chr28:11059665-11059451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-233
               

               Cow position:
               chr28:6935002-6935238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               56, 71
               

               Conread position:
               1-234
               

               Cow position:
               chr28:11814905-11815136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               119, 52
               

               Conread position:
               1-236
               

               Cow position:
               chr28:4873150-4873407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               44, 245
               

               Conread position:
               1-248
               

               Cow position:
               chr28:17012128-17012362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               106, 38
               

               Conread position:
               1-261
               

               Cow position:
               chr28:4046018-4045769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 38
               

               Conread position:
               1-262
               

               Cow position:
               chr28:2524119-2523856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               197
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               54, 80
               

               Conread position:
               1-268
               

               Cow position:
               chr28:11559459-11559724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 22
               

               Conread position:
               1-271
               

               Cow position:
               chr28:23579076-23578807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               55, 82
               

               Conread position:
               1-277
               

               Cow position:
               chr28:4013257-4012990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               1-280
               

               Cow position:
               chr28:13245738-13245462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               53, 82
               

               Conread position:
               1-294
               

               Cow position:
               chr28:17071514-17071217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               54, 83
               

               Conread position:
               1-294
               

               Cow position:
               chr28:22813422-22813148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               195, 41
               

               Conread position:
               1-296
               

               Cow position:
               chr28:3484760-3484458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 174
               

               Conread position:
               1-299
               

               Cow position:
               chr28:32593459-32593772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               47, 73
               

               Conread position:
               1-303
               

               Cow position:
               chr28:12672287-12672587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 82
               

               Conread position:
               1-303
               

               Cow position:
               chr28:30234558-30234265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               60, 116
               

               Conread position:
               1-311
               

               Cow position:
               chr28:19262410-19262723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 81
               

               Conread position:
               1-334
               

               Cow position:
               chr28:8359074-8358747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               62, 146
               

               Conread position:
               1-337
               

               Cow position:
               chr28:1632471-1632815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 17
               

               Conread position:
               1-337
               

               Cow position:
               chr28:4440473-4440143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               61, 187
               

               Conread position:
               1-337
               

               Cow position:
               chr28:5200001-5199668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               54, 71
               

               Conread position:
               1-340
               

               Cow position:
               chr28:7439413-7439082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               233
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               160, 65
               

               Conread position:
               1-341
               

               Cow position:
               chr28:21046415-21046732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               248
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               107, 60
               

               Conread position:
               1-342
               

               Cow position:
               chr28:8291587-8291270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               198, 42
               

               Conread position:
               1-348
               

               Cow position:
               chr28:11346315-11346660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               276, 52
               

               Conread position:
               1-348
               

               Cow position:
               chr28:13527373-13527032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 81
               

               Conread position:
               1-352
               

               Cow position:
               chr28:657291-657623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               187, 49
               

               Conread position:
               1-352
               

               Cow position:
               chr28:1383098-1383450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               250
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               55, 83
               

               Conread position:
               1-354
               

               Cow position:
               chr28:14720611-14720955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               326, 54
               

               Conread position:
               1-362
               

               Cow position:
               chr28:11866494-11866855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 52
               

               Conread position:
               1-363
               

               Cow position:
               chr28:11828785-11829129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 78
               

               Conread position:
               1-368
               

               Cow position:
               chr28:26982562-26982938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 81
               

               Conread position:
               1-369
               

               Cow position:
               chr28:4834669-4835038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 17
               

               Conread position:
               1-376
               

               Cow position:
               chr28:27313555-27313948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               63, 91
               

               Conread position:
               1-380
               

               Cow position:
               chr28:19055191-19054813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               262
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               54, 83
               

               Conread position:
               1-386
               

               Cow position:
               chr28:4884079-4884476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 74
               

               Conread position:
               1-387
               

               Cow position:
               chr28:29416551-29416927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 52
               

               Conread position:
               1-388
               

               Cow position:
               chr28:12598510-12598134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               270
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               277, 41
               

               Conread position:
               1-395
               

               Cow position:
               chr28:25973716-25973311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               269
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               56, 230
               

               Conread position:
               1-402
               

               Cow position:
               chr28:4016700-4016304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               276, 50
               

               Conread position:
               1-404
               

               Cow position:
               chr28:10053155-10053566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 49
               

               Conread position:
               1-406
               

               Cow position:
               chr28:751402-750997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 72
               

               Conread position:
               1-411
               

               Cow position:
               chr28:11884354-11884757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               274, 25
               

               Conread position:
               1-413
               

               Cow position:
               chr28:16204156-16204570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 188
               

               Conread position:
               1-413
               

               Cow position:
               chr28:34430249-34430663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 82
               

               Conread position:
               1-414
               

               Cow position:
               chr28:9285203-9285615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 35
               

               Conread position:
               1-415
               

               Cow position:
               chr28:4913918-4914340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 110
               

               Conread position:
               1-429
               

               Cow position:
               chr28:5236421-5236852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 86
               

               Conread position:
               1-431
               

               Cow position:
               chr28:22346199-22345765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 194
               

               Conread position:
               1-439
               

               Cow position:
               chr28:20409565-20409141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 119
               

               Conread position:
               1-451
               

               Cow position:
               chr28:26743805-26743348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 79
               

               Conread position:
               1-453
               

               Cow position:
               chr28:15263544-15264000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 80
               

               Conread position:
               1-458
               

               Cow position:
               chr28:11426374-11426825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 41
               

               Conread position:
               1-458
               

               Cow position:
               chr28:30303034-30303474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 52
               

               Conread position:
               1-481
               

               Cow position:
               chr28:10669761-10669270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 233
               

               Conread position:
               1-481
               

               Cow position:
               chr28:12430781-12430305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               485
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 133
               

               Conread position:
               1-488
               

               Cow position:
               chr28:3023742-3024220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 53
               

               Conread position:
               1-488
               

               Cow position:
               chr28:30293411-30293898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 82
               

               Conread position:
               1-488
               

               Cow position:
               chr28:34877798-34878281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 88
               

               Conread position:
               1-490
               

               Cow position:
               chr28:3143711-3144200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               507
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 41
               

               Conread position:
               1-490
               

               Cow position:
               chr28:7267775-7268246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 47
               

               Conread position:
               1-490
               

               Cow position:
               chr28:8347908-8347409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               507
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 82
               

               Conread position:
               1-490
               

               Cow position:
               chr28:28765726-28766223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               502
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 81
               

               Conread position:
               1-491
               

               Cow position:
               chr28:11759387-11759851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 169
               

               Conread position:
               1-491
               

               Cow position:
               chr28:16416324-16415841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               310
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               53, 30
               

               Conread position:
               1-491
               

               Cow position:
               chr28:22323433-22322951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               277, 65
               

               Conread position:
               1-492
               

               Cow position:
               chr28:3746371-3745888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               502
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 50
               

               Conread position:
               1-492
               

               Cow position:
               chr28:4138493-4138993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               518
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 83
               

               Conread position:
               1-492
               

               Cow position:
               chr28:5827105-5826633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               269, 41
               

               Conread position:
               1-492
               

               Cow position:
               chr28:10615773-10616265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 54
               

               Conread position:
               1-492
               

               Cow position:
               chr28:10745389-10744890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               503
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 81
               

               Conread position:
               1-492
               

               Cow position:
               chr28:11585035-11585522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 48
               

               Conread position:
               1-492
               

               Cow position:
               chr28:12964756-12964262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               510
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 140
               

               Conread position:
               1-492
               

               Cow position:
               chr28:14998238-14997749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 27
               

               Conread position:
               1-492
               

               Cow position:
               chr28:16919000-16919476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               499
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               278, 50
               

               Conread position:
               1-492
               

               Cow position:
               chr28:17637687-17638179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 102
               

               Conread position:
               1-492
               

               Cow position:
               chr28:20124955-20124474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 35
               

               Conread position:
               1-492
               

               Cow position:
               chr28:21103646-21104159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               524
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 78
               

               Conread position:
               1-492
               

               Cow position:
               chr28:21363917-21363443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               497
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 81
               

               Conread position:
               1-492
               

               Cow position:
               chr28:21845128-21844641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 52
               

               Conread position:
               1-492
               

               Cow position:
               chr28:21868631-21868136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               499
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 74
               

               Conread position:
               1-492
               

               Cow position:
               chr28:22308818-22308346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               497
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 82
               

               Conread position:
               1-492
               

               Cow position:
               chr28:22332705-22332235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 182
               

               Conread position:
               1-492
               

               Cow position:
               chr28:23531040-23530549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 56
               

               Conread position:
               1-492
               

               Cow position:
               chr28:23616579-23616087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 103
               

               Conread position:
               1-492
               

               Cow position:
               chr28:24672442-24671958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 82
               

               Conread position:
               1-496
               

               Cow position:
               chr28:8787713-8787231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 76
               

               Conread position:
               1-496
               

               Cow position:
               chr28:22500333-22500805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               505
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 25
               

               Conread position:
               3-496
               

               Cow position:
               chr28:2819944-2819441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               511
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 50
               

               Conread position:
               4-117
               

               Cow position:
               chr28:24767578-24767463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               39, 79
               

               Conread position:
               4-131
               

               Cow position:
               chr28:6301255-6301126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               51, 78
               

               Conread position:
               4-139
               

               Cow position:
               chr28:26960742-26960872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               4-141
               

               Cow position:
               chr28:8681266-8681395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               4-161
               

               Cow position:
               chr28:11827859-11827703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               49, 68
               

               Conread position:
               4-162
               

               Cow position:
               chr28:22307180-22307023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               51, 84
               

               Conread position:
               4-163
               

               Cow position:
               chr28:20281924-20281771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               4-169
               

               Cow position:
               chr28:4022847-4022680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               51, 78
               

               Conread position:
               4-170
               

               Cow position:
               chr28:20046713-20046559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               4-179
               

               Cow position:
               chr28:27429197-27429028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               4-184
               

               Cow position:
               chr28:24646759-24646585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               54, 44
               

               Conread position:
               4-184
               

               Cow position:
               chr28:32358275-32358100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               4-204
               

               Cow position:
               chr28:21008499-21008692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               158
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               4-233
               

               Cow position:
               chr28:11816508-11816726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               195, 29
               

               Conread position:
               4-236
               

               Cow position:
               chr28:20397197-20397429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 75
               

               Conread position:
               4-244
               

               Cow position:
               chr28:33322628-33322387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               115, 49
               

               Conread position:
               4-264
               

               Cow position:
               chr28:10298015-10297776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               4-268
               

               Cow position:
               chr28:7350824-7350567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               4-289
               

               Cow position:
               chr28:3011096-3011385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 78
               

               Conread position:
               4-322
               

               Cow position:
               chr28:10863624-10863927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               259, 49
               

               Conread position:
               4-326
               

               Cow position:
               chr28:10495127-10495426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               36, 77
               

               Conread position:
               4-351
               

               Cow position:
               chr28:4643599-4643939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 28
               

               Conread position:
               4-362
               

               Cow position:
               chr28:30937507-30937852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               254
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               213, 36
               

               Conread position:
               4-369
               

               Cow position:
               chr28:4881072-4881438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               273, 49
               

               Conread position:
               4-373
               

               Cow position:
               chr28:4159135-4158755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 228
               

               Conread position:
               4-373
               

               Cow position:
               chr28:4809946-4809597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 30
               

               Conread position:
               4-373
               

               Cow position:
               chr28:10845273-10844922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 14
               

               Conread position:
               4-396
               

               Cow position:
               chr28:5074350-5074724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               271
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               199, 43
               

               Conread position:
               4-398
               

               Cow position:
               chr28:14710512-14710123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               274
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               52, 79
               

               Conread position:
               4-407
               

               Cow position:
               chr28:9100100-9099704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 78
               

               Conread position:
               4-408
               

               Cow position:
               chr28:5144343-5144754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 80
               

               Conread position:
               4-429
               

               Cow position:
               chr28:27218496-27218068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 78
               

               Conread position:
               4-437
               

               Cow position:
               chr28:34134029-34133604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 17
               

               Conread position:
               4-456
               

               Cow position:
               chr28:7144971-7144511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 77
               

               Conread position:
               4-490
               

               Cow position:
               chr28:5931517-5931034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 57
               

               Conread position:
               4-491
               

               Cow position:
               chr28:22133079-22132612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 35
               

               Conread position:
               4-491
               

               Cow position:
               chr28:24966557-24966074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               497
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 51
               

               Conread position:
               4-491
               

               Cow position:
               chr28:25727544-25727067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 146
               

               Conread position:
               4-492
               

               Cow position:
               chr28:4307722-4308213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               505
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 80
               

               Conread position:
               4-492
               

               Cow position:
               chr28:14657887-14657381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               517
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 79
               

               Conread position:
               4-492
               

               Cow position:
               chr28:33884573-33884095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 53
               

               Conread position:
               4-495
               

               Cow position:
               chr28:23460315-23459819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               512
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 79
               

               Conread position:
               4-516
               

               Cow position:
               chr28:5204361-5203864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               519
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 22
               

               Conread position:
               5-154
               

               Cow position:
               chr28:3678529-3678384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               5-161
               

               Cow position:
               chr28:3423947-3423792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               5-164
               

               Cow position:
               chr28:26530697-26530854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               5-166
               

               Cow position:
               chr28:8716210-8716379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               43, 82
               

               Conread position:
               5-169
               

               Cow position:
               chr28:13269888-13269738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               5-174
               

               Cow position:
               chr28:14242866-14242695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               58, 31
               

               Conread position:
               5-176
               

               Cow position:
               chr28:7557560-7557734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               5-184
               

               Cow position:
               chr28:5188260-5188437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               105, 48
               

               Conread position:
               5-184
               

               Cow position:
               chr28:29850652-29850823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               5-191
               

               Cow position:
               chr28:8259802-8259613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               50, 79
               

               Conread position:
               5-195
               

               Cow position:
               chr28:4937069-4937261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               50, 77
               

               Conread position:
               5-201
               

               Cow position:
               chr28:17948947-17949137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               53, 36
               

               Conread position:
               5-202
               

               Cow position:
               chr28:555666-555479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               5-204
               

               Cow position:
               chr28:5630269-5630071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               61, 98
               

               Conread position:
               5-214
               

               Cow position:
               chr28:4186073-4185871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               5-236
               

               Cow position:
               chr28:20759523-20759760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               188
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               41, 110
               

               Conread position:
               5-277
               

               Cow position:
               chr28:5138829-5139097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               180, 37
               

               Conread position:
               5-284
               

               Cow position:
               chr28:6358240-6358517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               208
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               50, 78
               

               Conread position:
               5-290
               

               Cow position:
               chr28:12933563-12933844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               213
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               130, 48
               

               Conread position:
               5-290
               

               Cow position:
               chr28:18369843-18370121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               217
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               34, 77
               

               Conread position:
               5-294
               

               Cow position:
               chr28:19564065-19564345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 46
               

               Conread position:
               5-309
               

               Cow position:
               chr28:7008811-7009107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               5-311
               

               Cow position:
               chr28:3449479-3449165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 48
               

               Conread position:
               5-315
               

               Cow position:
               chr28:23296489-23296186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               272, 48
               

               Conread position:
               5-336
               

               Cow position:
               chr28:29988939-29989272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 61
               

               Conread position:
               5-352
               

               Cow position:
               chr28:11762868-11762526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               51, 79
               

               Conread position:
               5-366
               

               Cow position:
               chr28:23724299-23724645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 43
               

               Conread position:
               5-386
               

               Cow position:
               chr28:5436916-5437301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 68
               

               Conread position:
               5-407
               

               Cow position:
               chr28:12951586-12951202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               272, 50
               

               Conread position:
               5-415
               

               Cow position:
               chr28:9636288-9636695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 36
               

               Conread position:
               5-415
               

               Cow position:
               chr28:11422645-11423042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 50
               

               Conread position:
               5-427
               

               Cow position:
               chr28:26103868-26103465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 35
               

               Conread position:
               5-438
               

               Cow position:
               chr28:9740627-9740210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 28
               

               Conread position:
               5-443
               

               Cow position:
               chr28:34230401-34229963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 77
               

               Conread position:
               5-463
               

               Cow position:
               chr28:662270-661835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 41
               

               Conread position:
               5-488
               

               Cow position:
               chr28:16085484-16085014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 12
               

               Conread position:
               5-490
               

               Cow position:
               chr28:7697809-7698290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 132
               

               Conread position:
               5-490
               

               Cow position:
               chr28:25700698-25701173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               499
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 35
               

               Conread position:
               5-492
               

               Cow position:
               chr28:4071131-4070649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 46
               

               Conread position:
               5-492
               

               Cow position:
               chr28:5684870-5684389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               272, 50
               

               Conread position:
               5-492
               

               Cow position:
               chr28:5818008-5817537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 29
               

               Conread position:
               5-492
               

               Cow position:
               chr28:9426182-9426657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 37
               

               Conread position:
               5-492
               

               Cow position:
               chr28:10606468-10606927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 13
               

               Conread position:
               5-492
               

               Cow position:
               chr28:10978008-10977549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 8
               

               Conread position:
               5-492
               

               Cow position:
               chr28:11527089-11527569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 62
               

               Conread position:
               5-492
               

               Cow position:
               chr28:13474469-13473992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 48
               

               Conread position:
               5-492
               

               Cow position:
               chr28:16210931-16211412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 64
               

               Conread position:
               5-492
               

               Cow position:
               chr28:25057129-25056656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               273, 48
               

               Conread position:
               6-150
               

               Cow position:
               chr28:3729847-3729992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               32, 75
               

               Conread position:
               6-166
               

               Cow position:
               chr28:2077670-2077511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               52, 75
               

               Conread position:
               6-176
               

               Cow position:
               chr28:21207208-21207368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               91, 44
               

               Conread position:
               6-184
               

               Cow position:
               chr28:26531109-26531285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               52, 70
               

               Conread position:
               6-203
               

               Cow position:
               chr28:19294964-19295158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               51, 64
               

               Conread position:
               6-284
               

               Cow position:
               chr28:26055647-26055368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               199, 45
               

               Conread position:
               6-298
               

               Cow position:
               chr28:11079469-11079185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               214
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               91, 20
               

               Conread position:
               6-309
               

               Cow position:
               chr28:8140654-8140350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 53
               

               Conread position:
               6-377
               

               Cow position:
               chr28:5224873-5224512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               266
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               11, 74
               

               Conread position:
               6-398
               

               Cow position:
               chr28:18625406-18625001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 222
               

               Conread position:
               6-411
               

               Cow position:
               chr28:26340503-26340102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 188
               

               Conread position:
               6-440
               

               Cow position:
               chr28:3408053-3408480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               333, 47
               

               Conread position:
               6-488
               

               Cow position:
               chr28:7512412-7512901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               496
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 78
               

               Conread position:
               6-488
               

               Cow position:
               chr28:15272101-15272570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 78
               

               Conread position:
               6-490
               

               Cow position:
               chr28:16346367-16346829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 36
               

               Conread position:
               6-492
               

               Cow position:
               chr28:1838165-1837692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               506
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 80
               

               Conread position:
               7-143
               

               Cow position:
               chr28:19118140-19118002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               7-184
               

               Cow position:
               chr28:4364657-4364830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               7-185
               

               Cow position:
               chr28:6563726-6563907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               48, 75
               

               Conread position:
               7-260
               

               Cow position:
               chr28:4182169-4181921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               45, 26
               

               Conread position:
               7-439
               

               Cow position:
               chr28:26533714-26533280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 71
               

               Conread position:
               7-478
               

               Cow position:
               chr28:22371504-22371977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 35
               

               Conread position:
               7-481
               

               Cow position:
               chr28:2801395-2800942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               318
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               59, 96
               

               Conread position:
               7-489
               

               Cow position:
               chr28:2960663-2961129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 24
               

               Conread position:
               8-152
               

               Cow position:
               chr28:24651440-24651582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               8-168
               

               Cow position:
               chr28:13448291-13448131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               56, 73
               

               Conread position:
               8-177
               

               Cow position:
               chr28:4877261-4877432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               8-262
               

               Cow position:
               chr28:24707075-24706819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               42, 194
               

               Conread position:
               8-281
               

               Cow position:
               chr28:11307347-11307612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 187
               

               Conread position:
               8-301
               

               Cow position:
               chr28:23447660-23447949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               47, 26
               

               Conread position:
               8-310
               

               Cow position:
               chr28:5193494-5193187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 53
               

               Conread position:
               8-350
               

               Cow position:
               chr28:1538335-1537997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 74
               

               Conread position:
               8-428
               

               Cow position:
               chr28:23793144-23793552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 61
               

               Conread position:
               8-481
               

               Cow position:
               chr28:6059295-6059771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 75
               

               Conread position:
               8-492
               

               Cow position:
               chr28:4282322-4282807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 73
               

               Conread position:
               8-492
               

               Cow position:
               chr28:30803777-30803288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               315
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               154, 56
               

               Conread position:
               8-492
               

               Cow position:
               chr28:31649239-31648762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 47
               

               Conread position:
               9-175
               

               Cow position:
               chr28:24996453-24996612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               9-214
               

               Cow position:
               chr28:8304408-8304211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               149, 42
               

               Conread position:
               9-276
               

               Cow position:
               chr28:11197506-11197771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               45, 74
               

               Conread position:
               9-330
               

               Cow position:
               chr28:10907252-10906924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               48, 70
               

               Conread position:
               9-331
               

               Cow position:
               chr28:24082436-24082116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 66
               

               Conread position:
               9-429
               

               Cow position:
               chr28:3492621-3493036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 44
               

               Conread position:
               9-491
               

               Cow position:
               chr28:11686852-11687339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 71
               

               Conread position:
               9-492
               

               Cow position:
               chr28:14151392-14150923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 76
               

               Conread position:
               10-184
               

               Cow position:
               chr28:10775549-10775721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               137, 6
               

               Conread position:
               10-420
               

               Cow position:
               chr28:31841182-31841583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               287
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               61, 45
               

               Conread position:
               11-117
               

               Cow position:
               chr28:5711847-5711953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               55, 65
               

               Conread position:
               11-163
               

               Cow position:
               chr28:2777694-2777543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               11-360
               

               Cow position:
               chr28:9684173-9684504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               242
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               328, 28
               

               Conread position:
               11-361
               

               Cow position:
               chr28:13289993-13290319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               268, 42
               

               Conread position:
               11-381
               

               Cow position:
               chr28:4089895-4090249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 44
               

               Conread position:
               13-148
               

               Cow position:
               chr28:8258985-8258852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               14-318
               

               Cow position:
               chr28:9812433-9812142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               14-380
               

               Cow position:
               chr28:28631898-28631519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               42, 58
               

               Conread position:
               14-412
               

               Cow position:
               chr28:33036317-33036701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 39
               

               Conread position:
               15-133
               

               Cow position:
               chr28:24726280-24726394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               43, 27
               

               Conread position:
               15-166
               

               Cow position:
               chr28:8167193-8167342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               39, 56
               

               Conread position:
               15-429
               

               Cow position:
               chr28:16386359-16386758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 50
               

               Conread position:
               19-327
               

               Cow position:
               chr28:25728350-25728049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               258, 47
               

               Conread position:
               21-243
               

               Cow position:
               chr28:4823765-4823541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               178
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               26, 176
               

               Conread position:
               23-377
               

               Cow position:
               chr28:14512685-14512325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 13
               

               Conread position:
               23-429
               

               Cow position:
               chr28:25596775-25596380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 30
               

               Conread position:
               23-490
               

               Cow position:
               chr28:15601431-15600951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 60
               

               Conread position:
               24-126
               

               Cow position:
               chr28:10533170-10533270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               24-428
               

               Cow position:
               chr28:16369933-16370325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 39
               

               Conread position:
               24-431
               

               Cow position:
               chr28:4938952-4938584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               26-194
               

               Cow position:
               chr28:5552566-5552733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               135, 54
               

               Conread position:
               26-244
               

               Cow position:
               chr28:7437323-7437526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               27-426
               

               Cow position:
               chr28:2899138-2898746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 49
               

               Conread position:
               28-273
               

               Cow position:
               chr28:30865566-30865325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               15, 99
               

               Conread position:
               29-197
               

               Cow position:
               chr28:4101665-4101499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               115, 26
               

               Conread position:
               30-172
               

               Cow position:
               chr28:12385146-12385289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               17, 47
               

               Conread position:
               30-204
               

               Cow position:
               chr28:8149484-8149659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               25, 48
               

               Conread position:
               30-212
               

               Cow position:
               chr28:2772856-2772678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               28, 48
               

               Conread position:
               30-265
               

               Cow position:
               chr28:25677198-25677434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               120, 12
               

               Conread position:
               30-274
               

               Cow position:
               chr28:13232965-13233205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               28, 94
               

               Conread position:
               30-428
               

               Cow position:
               chr28:19079699-19080099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 50
               

               Conread position:
               31-328
               

               Cow position:
               chr28:30746585-30746879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 44
               

               Conread position:
               33-189
               

               Cow position:
               chr28:30081580-30081737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               22, 45
               

               Conread position:
               33-199
               

               Cow position:
               chr28:23047757-23047598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               33-256
               

               Cow position:
               chr28:3160809-3161032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               5, 31
               

               Conread position:
               33-307
               

               Cow position:
               chr28:32844789-32845064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               10, 101
               

               Conread position:
               33-407
               

               Cow position:
               chr28:4274701-4275061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               12, 52
               

               Conread position:
               33-409
               

               Cow position:
               chr28:2131781-2132155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 38
               

               Conread position:
               33-491
               

               Cow position:
               chr28:25564227-25563764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 52
               

               Conread position:
               34-321
               

               Cow position:
               chr28:3741018-3740736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               235, 154
               

               Conread position:
               34-362
               

               Cow position:
               chr28:6091505-6091174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               235
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               114, 193
               

               Conread position:
               34-438
               

               Cow position:
               chr28:4841248-4841658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 44
               

               Conread position:
               34-491
               

               Cow position:
               chr28:18139321-18139770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 42
               

               Conread position:
               35-473
               

               Cow position:
               chr28:16411127-16410695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               283
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               12, 43
               

               Conread position:
               36-368
               

               Cow position:
               chr28:10999529-10999860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               235
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               41, 27
               

               Conread position:
               36-377
               

               Cow position:
               chr28:7415870-7416209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               244
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               22, 45
               

               Conread position:
               36-492
               

               Cow position:
               chr28:5771504-5771051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 46
               

               Conread position:
               37-160
               

               Cow position:
               chr28:11365390-11365511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               37-169
               

               Cow position:
               chr28:2743219-2743088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               37-189
               

               Cow position:
               chr28:3397065-3397210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               37-204
               

               Cow position:
               chr28:32179831-32179668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               27, 10
               

               Conread position:
               37-217
               

               Cow position:
               chr28:7498008-7498190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               27, 39
               

               Conread position:
               37-269
               

               Cow position:
               chr28:8147725-8147953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 41
               

               Conread position:
               37-277
               

               Cow position:
               chr28:25195840-25195614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               37-342
               

               Cow position:
               chr28:2752355-2752662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 34
               

               Conread position:
               37-422
               

               Cow position:
               chr28:14649482-14649102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 78
               

               Conread position:
               37-436
               

               Cow position:
               chr28:19025866-19026262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 39
               

               Conread position:
               37-468
               

               Cow position:
               chr28:31109864-31110296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 45
               

               Conread position:
               37-488
               

               Cow position:
               chr28:16110076-16109642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 44
               

               Conread position:
               37-492
               

               Cow position:
               chr28:7684565-7684991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 44
               

               Conread position:
               37-492
               

               Cow position:
               chr28:19222013-19222460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 38
               

               Conread position:
               37-492
               

               Cow position:
               chr28:26685257-26684800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 54
               

               Conread position:
               37-496
               

               Cow position:
               chr28:8021963-8022430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 40
               

               Conread position:
               37-497
               

               Cow position:
               chr28:6971209-6971659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 34
               

               Conread position:
               38-319
               

               Cow position:
               chr28:27161191-27161472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 17
               

               Conread position:
               38-427
               

               Cow position:
               chr28:22321556-22321172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 14
               

               Conread position:
               38-436
               

               Cow position:
               chr28:29434290-29434684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 33
               

               Conread position:
               38-492
               

               Cow position:
               chr28:7548920-7549377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 17
               

               Conread position:
               38-492
               

               Cow position:
               chr28:20313415-20312959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 40
               

               Conread position:
               39-174
               

               Cow position:
               chr28:29041919-29042052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               39-415
               

               Cow position:
               chr28:26220393-26220023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 37
               

               Conread position:
               39-490
               

               Cow position:
               chr28:25400004-25399577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 36
               

               Conread position:
               39-492
               

               Cow position:
               chr28:32174764-32174340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 16
               

               Conread position:
               40-166
               

               Cow position:
               chr28:19024569-19024443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               18, 36
               

               Conread position:
               40-234
               

               Cow position:
               chr28:7805287-7805481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               6, 26
               

               Conread position:
               40-272
               

               Cow position:
               chr28:7388636-7388861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               15, 31
               

               Conread position:
               40-287
               

               Cow position:
               chr28:17398098-17398335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               23, 36
               

               Conread position:
               40-287
               

               Cow position:
               chr28:17414339-17414576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               23, 36
               

               Conread position:
               40-287
               

               Cow position:
               chr28:34247897-34248133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               237, 23
               

               Conread position:
               40-322
               

               Cow position:
               chr28:4355682-4355403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               215
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               18, 31
               

               Conread position:
               40-386
               

               Cow position:
               chr28:15081787-15082134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               230
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               188, 44
               

               Conread position:
               40-406
               

               Cow position:
               chr28:11007335-11006947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               119, 55
               

               Conread position:
               40-474
               

               Cow position:
               chr28:16409549-16409120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               287
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               24, 41
               

               Conread position:
               40-490
               

               Cow position:
               chr28:28164221-28163783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 78
               

               Conread position:
               40-491
               

               Cow position:
               chr28:3769536-3769984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               316
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               163, 35
               

               Conread position:
               40-492
               

               Cow position:
               chr28:34561477-34561043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 23
               

               Conread position:
               40-497
               

               Cow position:
               chr28:5365987-5366465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 83
               

               Conread position:
               41-362
               

               Cow position:
               chr28:18759922-18760228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 22
               

               Conread position:
               41-488
               

               Cow position:
               chr28:12619708-12619254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 8
               

               Conread position:
               42-202
               

               Cow position:
               chr28:5867854-5867702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               42-427
               

               Cow position:
               chr28:8408870-8408486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 152
               

               Conread position:
               42-448
               

               Cow position:
               chr28:23410189-23410596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 35
               

               Conread position:
               42-492
               

               Cow position:
               chr28:16398656-16398207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               296
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               19, 73
               

               Conread position:
               42-503
               

               Cow position:
               chr28:29199864-29199406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 34
               

               Conread position:
               43-147
               

               Cow position:
               chr28:9927770-9927871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               87
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               43-232
               

               Cow position:
               chr28:5650603-5650792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               17, 70
               

               Conread position:
               43-240
               

               Cow position:
               chr28:7619017-7619215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               164, 183
               

               Conread position:
               43-266
               

               Cow position:
               chr28:17601421-17601638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               15, 36
               

               Conread position:
               43-427
               

               Cow position:
               chr28:25249487-25249105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 33
               

               Conread position:
               43-433
               

               Cow position:
               chr28:33052169-33051764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 22
               

               Conread position:
               43-437
               

               Cow position:
               chr28:10172286-10172674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               309, 23
               

               Conread position:
               43-491
               

               Cow position:
               chr28:21355364-21354910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 37
               

               Conread position:
               43-492
               

               Cow position:
               chr28:25806707-25806282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 6
               

               Conread position:
               44-173
               

               Cow position:
               chr28:9418834-9418963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               20, 36
               

               Conread position:
               45-256
               

               Cow position:
               chr28:11348554-11348351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               32, 40
               

               Conread position:
               45-492
               

               Cow position:
               chr28:4188684-4188215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 30
               

               Conread position:
               46-234
               

               Cow position:
               chr28:7776373-7776560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               108, 18
               

               Conread position:
               46-259
               

               Cow position:
               chr28:12070361-12070154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               151, 98
               

               Conread position:
               46-463
               

               Cow position:
               chr28:616510-616117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 31
               

               Conread position:
               46-490
               

               Cow position:
               chr28:18591401-18590957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 106
               

               Conread position:
               47-189
               

               Cow position:
               chr28:10163926-10163787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               17, 34
               

               Conread position:
               47-242
               

               Cow position:
               chr28:4765804-4765611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               73, 30
               

               Conread position:
               47-434
               

               Cow position:
               chr28:3078555-3078935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 16
               

               Conread position:
               47-488
               

               Cow position:
               chr28:30326963-30327396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 29
               

               Conread position:
               48-492
               

               Cow position:
               chr28:11752011-11752460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 179
               

               Conread position:
               49-332
               

               Cow position:
               chr28:22571542-22571816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               213
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               156, 26
               

               Conread position:
               49-369
               

               Cow position:
               chr28:16419302-16418980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               150, 30
               

               Conread position:
               49-438
               

               Cow position:
               chr28:26719468-26719099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 14
               

               Conread position:
               49-463
               

               Cow position:
               chr28:18354200-18354606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 27
               

               Conread position:
               49-492
               

               Cow position:
               chr28:10588895-10589344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 21
               

               Conread position:
               50-178
               

               Cow position:
               chr28:26784117-26784243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               50-448
               

               Cow position:
               chr28:14235080-14234703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 58
               

               Conread position:
               51-429
               

               Cow position:
               chr28:18934578-18934200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 24
               

               Conread position:
               51-472
               

               Cow position:
               chr28:23007606-23008023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 24
               

               Conread position:
               52-331
               

               Cow position:
               chr28:33284987-33285267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               85, 32
               

               Conread position:
               52-490
               

               Cow position:
               chr28:3914841-3914397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 24
               

               Conread position:
               52-490
               

               Cow position:
               chr28:33163339-33163770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 96
               

               Conread position:
               53-392
               

               Cow position:
               chr28:24018110-24017788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               246
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               10, 94
               

               Conread position:
               53-492
               

               Cow position:
               chr28:26922245-26922685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 23
               

               Conread position:
               53-505
               

               Cow position:
               chr28:16770712-16770265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 43
               

               Conread position:
               54-407
               

               Cow position:
               chr28:11817843-11818191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 25
               

               Conread position:
               54-409
               

               Cow position:
               chr28:17362480-17362811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               124, 105
               

               Conread position:
               54-432
               

               Cow position:
               chr28:13865960-13865590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 21
               

               Conread position:
               54-496
               

               Cow position:
               chr28:7865450-7865012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 21
               

               Conread position:
               55-183
               

               Cow position:
               chr28:3147599-3147475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               55-453
               

               Cow position:
               chr28:5128607-5129003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 173
               

               Conread position:
               55-492
               

               Cow position:
               chr28:21598130-21598568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 138
               

               Conread position:
               56-214
               

               Cow position:
               chr28:7156956-7156797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               140, 19
               

               Conread position:
               56-346
               

               Cow position:
               chr28:6643164-6643446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               148, 28
               

               Conread position:
               56-422
               

               Cow position:
               chr28:14508250-14508612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               253
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               66, 19
               

               Conread position:
               56-431
               

               Cow position:
               chr28:11500765-11501147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               260
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               72, 28
               

               Conread position:
               56-438
               

               Cow position:
               chr28:14494942-14494571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               266
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               215, 19
               

               Conread position:
               56-439
               

               Cow position:
               chr28:30608068-30608441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 19
               

               Conread position:
               56-448
               

               Cow position:
               chr28:23676257-23675873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 13
               

               Conread position:
               56-479
               

               Cow position:
               chr28:20963410-20963833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               288
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               144, 28
               

               Conread position:
               56-480
               

               Cow position:
               chr28:25825747-25826166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               291
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               147, 28
               

               Conread position:
               57-222
               

               Cow position:
               chr28:4438830-4438664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               33, 12
               

               Conread position:
               57-289
               

               Cow position:
               chr28:5166885-5166654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               64, 22
               

               Conread position:
               57-294
               

               Cow position:
               chr28:7372004-7372238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               146, 18
               

               Conread position:
               57-309
               

               Cow position:
               chr28:17601757-17602006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               204, 18
               

               Conread position:
               57-491
               

               Cow position:
               chr28:15678004-15677586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               57-492
               

               Cow position:
               chr28:25763141-25762717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 22
               

               Conread position:
               59-222
               

               Cow position:
               chr28:2762311-2762148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               144, 16
               

               Conread position:
               59-456
               

               Cow position:
               chr28:31871639-31872026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               273
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               8, 27
               

               Conread position:
               59-491
               

               Cow position:
               chr28:11047714-11047262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 21
               

               Conread position:
               59-492
               

               Cow position:
               chr28:14934074-14933647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 20
               

               Conread position:
               60-473
               

               Cow position:
               chr28:16407199-16406791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               285
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               142, 20
               

               Conread position:
               61-439
               

               Cow position:
               chr28:11379925-11380305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               259
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               36, 47
               

               Conread position:
               62-346
               

               Cow position:
               chr28:32365958-32365675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 163
               

               Conread position:
               62-369
               

               Cow position:
               chr28:3169074-3169383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               15, 82
               

               Conread position:
               62-430
               

               Cow position:
               chr28:13608011-13607632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 21
               

               Conread position:
               62-492
               

               Cow position:
               chr28:26614986-26614580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 13
               

               Conread position:
               63-438
               

               Cow position:
               chr28:13176577-13176940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 12
               

               Conread position:
               63-492
               

               Cow position:
               chr28:21380992-21380566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 6
               

               Conread position:
               65-201
               

               Cow position:
               chr28:5205381-5205247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               65-436
               

               Cow position:
               chr28:1099554-1099901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 10
               

               Conread position:
               65-487
               

               Cow position:
               chr28:15043752-15044164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 10
               

               Conread position:
               67-329
               

               Cow position:
               chr28:2873028-2872765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               126, 154
               

               Conread position:
               68-408
               

               Cow position:
               chr28:4098938-4098614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               136, 124
               

               Conread position:
               69-440
               

               Cow position:
               chr28:2340645-2340266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               15, 47
               

               Conread position:
               69-470
               

               Cow position:
               chr28:7228282-7228677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 11
               

               Conread position:
               70-211
               

               Cow position:
               chr28:19345356-19345216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               87, 45
               

               Conread position:
               70-216
               

               Cow position:
               chr28:10964525-10964382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               127, 72
               

               Conread position:
               70-436
               

               Cow position:
               chr28:23621643-23621289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 41
               

               Conread position:
               71-481
               

               Cow position:
               chr28:11786612-11787010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 139
               

               Conread position:
               72-428
               

               Cow position:
               chr28:21502501-21502144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 126
               

               Conread position:
               72-432
               

               Cow position:
               chr28:2862972-2862606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 121
               

               Conread position:
               75-489
               

               Cow position:
               chr28:32300256-32300678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               285
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               112, 37
               

               Conread position:
               75-491
               

               Cow position:
               chr28:13890053-13889630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 31
               

               Conread position:
               75-498
               

               Cow position:
               chr28:2814408-2814819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 79
               

               Conread position:
               76-376
               

               Cow position:
               chr28:18186656-18186345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 106
               

               Conread position:
               77-432
               

               Cow position:
               chr28:21873857-21873517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               191, 9
               

               Conread position:
               77-491
               

               Cow position:
               chr28:13693847-13693435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 7
               

               Conread position:
               77-491
               

               Cow position:
               chr28:32304893-32305312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               274
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               17, 31
               

               Conread position:
               77-492
               

               Cow position:
               chr28:19301386-19300981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               262
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               17, 31
               

               Conread position:
               78-426
               

               Cow position:
               chr28:34636764-34636429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               241
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               19, 30
               

               Conread position:
               78-492
               

               Cow position:
               chr28:4536558-4536156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 119
               

               Conread position:
               80-427
               

               Cow position:
               chr28:23772197-23772550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               105, 147
               

               Conread position:
               80-491
               

               Cow position:
               chr28:10474302-10473894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               264
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               127, 138
               

               Conread position:
               80-492
               

               Cow position:
               chr28:5747360-5747766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               272
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               106, 25
               

               Conread position:
               80-492
               

               Cow position:
               chr28:8911132-8911535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               278
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               131, 49
               

               Conread position:
               80-492
               

               Cow position:
               chr28:11733024-11733440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               119, 124
               

               Conread position:
               80-492
               

               Cow position:
               chr28:11931280-11931701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               272
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               26, 149
               

               Conread position:
               80-492
               

               Cow position:
               chr28:28341400-28340982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               266
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               106, 71
               

               Conread position:
               80-492
               

               Cow position:
               chr28:30842665-30842271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               274
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               87, 60
               

               Conread position:
               83-436
               

               Cow position:
               chr28:20265494-20265134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               14, 28
               

               Conread position:
               83-439
               

               Cow position:
               chr28:9176662-9177016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               242
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               120, 11
               

               Conread position:
               83-491
               

               Cow position:
               chr28:13726256-13725847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               13, 25
               

               Conread position:
               84-312
               

               Cow position:
               chr28:5297370-5297141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               111, 59
               

               Conread position:
               84-406
               

               Cow position:
               chr28:25283286-25282976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               239
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               197, 51
               

               Conread position:
               84-492
               

               Cow position:
               chr28:5792800-5792387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 141
               

               Conread position:
               88-478
               

               Cow position:
               chr28:30809577-30809185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               100, 67
               

               Conread position:
               89-330
               

               Cow position:
               chr28:10057500-10057745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               99, 128
               

               Conread position:
               89-472
               

               Cow position:
               chr28:34442671-34443059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 109
               

               Conread position:
               89-492
               

               Cow position:
               chr28:12947036-12946630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 136
               

               Conread position:
               89-492
               

               Cow position:
               chr28:13267876-13267466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 46
               

               Conread position:
               91-452
               

               Cow position:
               chr28:21672878-21672524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               258
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               116, 51
               

               Conread position:
               94-458
               

               Cow position:
               chr28:31987696-31987324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 133
               

               Conread position:
               94-491
               

               Cow position:
               chr28:16687108-16686720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 17
               

               Conread position:
               95-362
               

               Cow position:
               chr28:17235655-17235914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               182, 55
               

               Conread position:
               95-425
               

               Cow position:
               chr28:10529409-10529731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 120
               

               Conread position:
               96-492
               

               Cow position:
               chr28:10681745-10682137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 29
               

               Conread position:
               100-492
               

               Cow position:
               chr28:10533859-10534242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 70
               

               Conread position:
               102-320
               

               Cow position:
               chr28:12363083-12363305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               98, 91
               

               Conread position:
               104-491
               

               Cow position:
               chr28:33698182-33697799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               267
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               57, 8
               

               Conread position:
               105-342
               

               Cow position:
               chr28:7500960-7501189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               173, 31
               

               Conread position:
               105-429
               

               Cow position:
               chr28:24367872-24368203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               247
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               163, 20
               

               Conread position:
               105-442
               

               Cow position:
               chr28:8382409-8382068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               91, 65
               

               Conread position:
               105-492
               

               Cow position:
               chr28:5941818-5941427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               254
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               81, 116
               

               Conread position:
               105-492
               

               Cow position:
               chr28:17662618-17663009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               260
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               81, 116
               

               Conread position:
               105-492
               

               Cow position:
               chr28:26727347-26727727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               263
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               81, 113
               

               Conread position:
               105-492
               

               Cow position:
               chr28:29035321-29035711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               262
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               67, 116
               

               Conread position:
               107-436
               

               Cow position:
               chr28:25071188-25070857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               244
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               172, 74
               

               Conread position:
               108-491
               

               Cow position:
               chr28:34208777-34208404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               254
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               59, 122
               

               Conread position:
               111-363
               

               Cow position:
               chr28:3105333-3105052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               9, 130
               

               Conread position:
               112-426
               

               Cow position:
               chr28:22485317-22484999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 112
               

               Conread position:
               112-492
               

               Cow position:
               chr28:12758436-12758822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 297
               

               Conread position:
               113-492
               

               Cow position:
               chr28:4588160-4587781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 22
               

               Conread position:
               114-492
               

               Cow position:
               chr28:7751239-7751615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 26
               

               Conread position:
               115-395
               

               Cow position:
               chr28:2737745-2738030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               73, 102
               

               Conread position:
               116-492
               

               Cow position:
               chr28:3256858-3256486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 78
               

               Conread position:
               117-427
               

               Cow position:
               chr28:18462553-18462862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               80, 26
               

               Conread position:
               120-492
               

               Cow position:
               chr28:3000552-3000926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               46, 56
               

               Conread position:
               121-429
               

               Cow position:
               chr28:4058037-4057734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 95
               

               Conread position:
               122-387
               

               Cow position:
               chr28:3714855-3714591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               89, 71
               

               Conread position:
               123-490
               

               Cow position:
               chr28:18717077-18717438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 70
               

               Conread position:
               126-489
               

               Cow position:
               chr28:22279150-22279493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               133, 67
               

               Conread position:
               129-428
               

               Cow position:
               chr28:14218428-14218727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               71, 31
               

               Conread position:
               129-429
               

               Cow position:
               chr28:6862001-6861701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 43
               

               Conread position:
               129-497
               

               Cow position:
               chr28:16401946-16401577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               256
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               74, 26
               

               Conread position:
               136-492
               

               Cow position:
               chr28:5904772-5904421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 46
               

               Conread position:
               136-492
               

               Cow position:
               chr28:18791056-18790697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 58
               

               Conread position:
               136-493
               

               Cow position:
               chr28:20538900-20538534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               246
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               50, 91
               

               Conread position:
               137-481
               

               Cow position:
               chr28:34579376-34579724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               67, 84
               

               Conread position:
               137-491
               

               Cow position:
               chr28:15591015-15590682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               124, 45
               

               Conread position:
               138-360
               

               Cow position:
               chr28:22339032-22338820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               61, 54
               

               Conread position:
               138-429
               

               Cow position:
               chr28:25424256-25424554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 94
               

               Conread position:
               138-439
               

               Cow position:
               chr28:16252818-16253117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 89
               

               Conread position:
               138-481
               

               Cow position:
               chr28:17288254-17287924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 66
               

               Conread position:
               138-481
               

               Cow position:
               chr28:34581071-34581419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               70, 55
               

               Conread position:
               138-488
               

               Cow position:
               chr28:26269372-26269020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 90
               

               Conread position:
               138-490
               

               Cow position:
               chr28:17316903-17316551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 74
               

               Conread position:
               138-492
               

               Cow position:
               chr28:4215413-4215055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               243
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               142, 70
               

               Conread position:
               138-492
               

               Cow position:
               chr28:7208833-7209185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               140, 70
               

               Conread position:
               138-492
               

               Cow position:
               chr28:15008210-15007847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 96
               

               Conread position:
               138-492
               

               Cow position:
               chr28:28098774-28098415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               47, 63
               

               Conread position:
               139-423
               

               Cow position:
               chr28:7723354-7723642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               27, 80
               

               Conread position:
               139-430
               

               Cow position:
               chr28:6334530-6334231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               46, 88
               

               Conread position:
               139-439
               

               Cow position:
               chr28:33256628-33256327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               47, 65
               

               Conread position:
               139-448
               

               Cow position:
               chr28:8963558-8963253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               140, 54
               

               Conread position:
               139-486
               

               Cow position:
               chr28:1172630-1172981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               12, 83
               

               Conread position:
               139-488
               

               Cow position:
               chr28:20934105-20934456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               47, 82
               

               Conread position:
               139-490
               

               Cow position:
               chr28:12651644-12651290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 82
               

               Conread position:
               139-491
               

               Cow position:
               chr28:9268144-9267786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               252
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               46, 90
               

               Conread position:
               139-492
               

               Cow position:
               chr28:786954-786597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 82
               

               Conread position:
               139-492
               

               Cow position:
               chr28:1509176-1508820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               248
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               86, 26
               

               Conread position:
               139-492
               

               Cow position:
               chr28:2089537-2089181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               243
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               140, 47
               

               Conread position:
               139-492
               

               Cow position:
               chr28:4583284-4582923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               36, 31
               

               Conread position:
               139-492
               

               Cow position:
               chr28:5212633-5212276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 82
               

               Conread position:
               139-492
               

               Cow position:
               chr28:5360975-5361330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               245
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               47, 77
               

               Conread position:
               139-492
               

               Cow position:
               chr28:9848287-9848642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 82
               

               Conread position:
               139-492
               

               Cow position:
               chr28:11504978-11505331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               241
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               47, 33
               

               Conread position:
               139-492
               

               Cow position:
               chr28:11547053-11547394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               63, 54
               

               Conread position:
               139-492
               

               Cow position:
               chr28:17392862-17392505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               241
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               47, 82
               

               Conread position:
               139-492
               

               Cow position:
               chr28:18515851-18516205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               36, 31
               

               Conread position:
               139-492
               

               Cow position:
               chr28:19515352-19515707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               245
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               58, 64
               

               Conread position:
               139-492
               

               Cow position:
               chr28:24605775-24606126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               29, 36
               

               Conread position:
               139-492
               

               Cow position:
               chr28:26418705-26419061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 83
               

               Conread position:
               139-492
               

               Cow position:
               chr28:27503555-27503913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               46, 79
               

               Conread position:
               139-492
               

               Cow position:
               chr28:27683662-27684021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               248
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               47, 83
               

               Conread position:
               139-492
               

               Cow position:
               chr28:34598617-34598260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               245
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               26, 46
               

               Conread position:
               139-493
               

               Cow position:
               chr28:33466869-33466505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               239
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               47, 87
               

               Conread position:
               140-311
               

               Cow position:
               chr28:33893973-33894144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               13, 53
               

               Conread position:
               140-357
               

               Cow position:
               chr28:28903627-28903847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               55, 88
               

               Conread position:
               140-439
               

               Cow position:
               chr28:16243731-16244021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 48
               

               Conread position:
               140-449
               

               Cow position:
               chr28:11506048-11505741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               141, 43
               

               Conread position:
               140-458
               

               Cow position:
               chr28:28472295-28471974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               141, 11
               

               Conread position:
               140-473
               

               Cow position:
               chr28:6486631-6486302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               61, 46
               

               Conread position:
               140-474
               

               Cow position:
               chr28:7607272-7606935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               64, 90
               

               Conread position:
               140-481
               

               Cow position:
               chr28:8066825-8066479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               11, 82
               

               Conread position:
               140-486
               

               Cow position:
               chr28:8111646-8111298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               87, 53
               

               Conread position:
               140-486
               

               Cow position:
               chr28:34007906-34008262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               45, 30
               

               Conread position:
               140-488
               

               Cow position:
               chr28:6318867-6319219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               62, 53
               

               Conread position:
               140-489
               

               Cow position:
               chr28:6775593-6775945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               65, 53
               

               Conread position:
               140-492
               

               Cow position:
               chr28:1199491-1199135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               57, 81
               

               Conread position:
               140-492
               

               Cow position:
               chr28:1262301-1261945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               244
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               65, 53
               

               Conread position:
               140-492
               

               Cow position:
               chr28:1942999-1943357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               64, 53
               

               Conread position:
               140-492
               

               Cow position:
               chr28:1957659-1957303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               241
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               67, 53
               

               Conread position:
               140-492
               

               Cow position:
               chr28:2423004-2422649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               141, 53
               

               Conread position:
               140-492
               

               Cow position:
               chr28:2646003-2645649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               141, 53
               

               Conread position:
               140-492
               

               Cow position:
               chr28:3187248-3187604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               244
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               47, 81
               

               Conread position:
               140-492
               

               Cow position:
               chr28:3892274-3891918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               11, 82
               

               Conread position:
               140-492
               

               Cow position:
               chr28:4311284-4310929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               62, 53
               

               Conread position:
               140-492
               

               Cow position:
               chr28:5335219-5335574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               142, 53
               

               Conread position:
               140-492
               

               Cow position:
               chr28:5638347-5637991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               65, 53
               

               Conread position:
               140-492
               

               Cow position:
               chr28:7196811-7197167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               11, 54
               

               Conread position:
               140-492
               

               Cow position:
               chr28:9183161-9182808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               141, 53
               

               Conread position:
               140-492
               

               Cow position:
               chr28:10513178-10512829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               230
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               178, 53
               

               Conread position:
               140-492
               

               Cow position:
               chr28:11280661-11281017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               141, 53
               

               Conread position:
               140-492
               

               Cow position:
               chr28:14113722-14113365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               236
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               65, 53
               

               Conread position:
               140-492
               

               Cow position:
               chr28:14434377-14434015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               140-492
               

               Cow position:
               chr28:17687364-17687721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               236
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               11, 82
               

               Conread position:
               140-492
               

               Cow position:
               chr28:20966366-20966722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               239
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               141, 53
               

               Conread position:
               140-492
               

               Cow position:
               chr28:21766855-21767211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               243
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               46, 79
               

               Conread position:
               140-492
               

               Cow position:
               chr28:21893485-21893841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               65, 53
               

               Conread position:
               140-492
               

               Cow position:
               chr28:22083457-22083813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               57, 83
               

               Conread position:
               140-492
               

               Cow position:
               chr28:24592806-24592450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               65, 53
               

               Conread position:
               140-492
               

               Cow position:
               chr28:25105131-25104775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               57, 81
               

               Conread position:
               140-492
               

               Cow position:
               chr28:25411914-25411558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               57, 81
               

               Conread position:
               140-492
               

               Cow position:
               chr28:25682913-25683269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               237
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               65, 53
               

               Conread position:
               140-492
               

               Cow position:
               chr28:25829687-25829335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               65, 53
               

               Conread position:
               140-492
               

               Cow position:
               chr28:27479061-27478707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               243
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               57, 81
               

               Conread position:
               140-492
               

               Cow position:
               chr28:28356490-28356846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               141, 60
               

               Conread position:
               140-492
               

               Cow position:
               chr28:28798258-28798608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               139, 75
               

               Conread position:
               140-492
               

               Cow position:
               chr28:29221996-29222347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               65, 53
               

               Conread position:
               140-492
               

               Cow position:
               chr28:29683534-29683177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               11, 82
               

               Conread position:
               140-492
               

               Cow position:
               chr28:34732027-34731671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               57, 81
               

               Conread position:
               140-494
               

               Cow position:
               chr28:9277182-9276827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               141, 53
               

               Conread position:
               141-367
               

               Cow position:
               chr28:15589682-15589459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               138, 74
               

               Conread position:
               141-381
               

               Cow position:
               chr28:28764651-28764413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               61, 44
               

               Conread position:
               141-427
               

               Cow position:
               chr28:8416071-8416365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               201
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               56, 91
               

               Conread position:
               141-490
               

               Cow position:
               chr28:23802686-23802341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               243
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               45, 80
               

               Conread position:
               141-492
               

               Cow position:
               chr28:5270924-5270569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               45, 80
               

               Conread position:
               141-492
               

               Cow position:
               chr28:34244003-34243647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               241
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               61, 81
               

               Conread position:
               142-346
               

               Cow position:
               chr28:15944188-15943984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               63, 46
               

               Conread position:
               142-491
               

               Cow position:
               chr28:14675544-14675193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               239
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               52, 29
               

               Conread position:
               142-492
               

               Cow position:
               chr28:21491132-21491486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               236
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               58, 51
               

               Conread position:
               142-492
               

               Cow position:
               chr28:32362795-32362452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               231
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               60, 51
               

               Conread position:
               143-448
               

               Cow position:
               chr28:30899854-30900165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               138, 50
               

               Conread position:
               143-465
               

               Cow position:
               chr28:13411792-13412118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               54, 78
               

               Conread position:
               143-492
               

               Cow position:
               chr28:29658461-29658805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               137, 42
               

               Conread position:
               143-492
               

               Cow position:
               chr28:30561502-30561149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               235
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               54, 78
               

               Conread position:
               144-432
               

               Cow position:
               chr28:12961858-12961566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               53, 77
               

               Conread position:
               144-437
               

               Cow position:
               chr28:32265545-32265843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               53, 96
               

               Conread position:
               144-451
               

               Cow position:
               chr28:97091-97402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               53, 77
               

               Conread position:
               144-491
               

               Cow position:
               chr28:7887794-7888144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               50, 77
               

               Conread position:
               144-492
               

               Cow position:
               chr28:332740-332388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               237
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               53, 77
               

               Conread position:
               144-492
               

               Cow position:
               chr28:1575213-1575565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               53, 77
               

               Conread position:
               144-492
               

               Cow position:
               chr28:3628362-3628015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               61, 16
               

               Conread position:
               144-492
               

               Cow position:
               chr28:7060321-7059969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               235
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               53, 77
               

               Conread position:
               144-492
               

               Cow position:
               chr28:7715522-7715874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               53, 77
               

               Conread position:
               144-492
               

               Cow position:
               chr28:7794121-7794474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               53, 77
               

               Conread position:
               144-492
               

               Cow position:
               chr28:7936929-7936577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               53, 77
               

               Conread position:
               144-492
               

               Cow position:
               chr28:7970447-7970799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               53, 77
               

               Conread position:
               144-492
               

               Cow position:
               chr28:10934122-10934474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               53, 77
               

               Conread position:
               144-492
               

               Cow position:
               chr28:12259816-12260168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               53, 77
               

               Conread position:
               144-492
               

               Cow position:
               chr28:15107288-15107640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               53, 77
               

               Conread position:
               144-492
               

               Cow position:
               chr28:15285508-15285859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               240
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               61, 49
               

               Conread position:
               144-492
               

               Cow position:
               chr28:15408404-15408756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               53, 77
               

               Conread position:
               144-492
               

               Cow position:
               chr28:22577492-22577140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               53, 77
               

               Conread position:
               144-492
               

               Cow position:
               chr28:23312281-23312631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               137, 59
               

               Conread position:
               144-492
               

               Cow position:
               chr28:23489453-23489804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               137, 76
               

               Conread position:
               144-492
               

               Cow position:
               chr28:23823032-23823385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               234
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               61, 49
               

               Conread position:
               144-492
               

               Cow position:
               chr28:25555934-25556278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               137, 76
               

               Conread position:
               144-492
               

               Cow position:
               chr28:25892797-25893145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               236
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               137, 49
               

               Conread position:
               144-492
               

               Cow position:
               chr28:30209666-30210015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               233
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               50, 60
               

               Conread position:
               144-492
               

               Cow position:
               chr28:30283741-30284093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               53, 77
               

               Conread position:
               144-492
               

               Cow position:
               chr28:34380092-34379740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               53, 77
               

               Conread position:
               145-337
               

               Cow position:
               chr28:33032293-33032105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               52, 81
               

               Conread position:
               145-438
               

               Cow position:
               chr28:4888720-4889017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               134, 48
               

               Conread position:
               145-489
               

               Cow position:
               chr28:29393044-29392690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               32, 56
               

               Conread position:
               145-490
               

               Cow position:
               chr28:9851644-9851323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               145-491
               

               Cow position:
               chr28:12942413-12942078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               52, 205
               

               Conread position:
               145-492
               

               Cow position:
               chr28:17130572-17130920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               53, 40
               

               Conread position:
               146-377
               

               Cow position:
               chr28:25459564-25459325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               47, 83
               

               Conread position:
               146-428
               

               Cow position:
               chr28:29135734-29135447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               6, 76
               

               Conread position:
               146-451
               

               Cow position:
               chr28:19065620-19065302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               146-472
               

               Cow position:
               chr28:19173498-19173828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               5, 76
               

               Conread position:
               146-473
               

               Cow position:
               chr28:30978302-30977988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               122, 40
               

               Conread position:
               146-478
               

               Cow position:
               chr28:16857376-16857713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               6, 76
               

               Conread position:
               146-492
               

               Cow position:
               chr28:3881663-3882010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               6, 53
               

               Conread position:
               146-492
               

               Cow position:
               chr28:15998231-15998580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               8, 75
               

               Conread position:
               146-492
               

               Cow position:
               chr28:22318615-22318965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               234
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               5, 75
               

               Conread position:
               146-492
               

               Cow position:
               chr28:29044658-29044309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               5, 75
               

               Conread position:
               147-427
               

               Cow position:
               chr28:28076390-28076654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               132, 46
               

               Conread position:
               147-492
               

               Cow position:
               chr28:19222574-19222909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 7
               

               Conread position:
               148-396
               

               Cow position:
               chr28:9108475-9108222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               131, 75
               

               Conread position:
               148-458
               

               Cow position:
               chr28:17370332-17370019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               57, 45
               

               Conread position:
               149-332
               

               Cow position:
               chr28:7542055-7542240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               45, 69
               

               Conread position:
               150-358
               

               Cow position:
               chr28:7607950-7608161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               47, 185
               

               Conread position:
               150-470
               

               Cow position:
               chr28:15063313-15063632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               232
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               65, 41
               

               Conread position:
               150-473
               

               Cow position:
               chr28:6546356-6546686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               230
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               11, 43
               

               Conread position:
               150-490
               

               Cow position:
               chr28:7503872-7503524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 77
               

               Conread position:
               150-491
               

               Cow position:
               chr28:8681813-8682165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 53
               

               Conread position:
               150-500
               

               Cow position:
               chr28:5552912-5553248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 79
               

               Conread position:
               151-490
               

               Cow position:
               chr28:882482-882825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               31, 20
               

               Conread position:
               151-492
               

               Cow position:
               chr28:800252-800597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               54, 42
               

               Conread position:
               151-492
               

               Cow position:
               chr28:14610789-14610444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               130, 42
               

               Conread position:
               154-426
               

               Cow position:
               chr28:24646561-24646291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               33, 74
               

               Conread position:
               154-476
               

               Cow position:
               chr28:22351518-22351192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               6, 69
               

               Conread position:
               154-492
               

               Cow position:
               chr28:12048687-12049028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 24
               

               Conread position:
               155-294
               

               Cow position:
               chr28:7644475-7644332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               39, 73
               

               Conread position:
               155-362
               

               Cow position:
               chr28:19024166-19023947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               39, 73
               

               Conread position:
               155-364
               

               Cow position:
               chr28:118029-118243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               171
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               42, 69
               

               Conread position:
               155-432
               

               Cow position:
               chr28:5773657-5773387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 38
               

               Conread position:
               155-478
               

               Cow position:
               chr28:5769219-5768892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 38
               

               Conread position:
               155-492
               

               Cow position:
               chr28:4022409-4022067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 71
               

               Conread position:
               155-492
               

               Cow position:
               chr28:15374802-15375137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 48
               

               Conread position:
               155-492
               

               Cow position:
               chr28:23480237-23480576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 47
               

               Conread position:
               155-497
               

               Cow position:
               chr28:4880243-4880583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 71
               

               Conread position:
               156-492
               

               Cow position:
               chr28:12593635-12593320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               122, 37
               

               Conread position:
               157-380
               

               Cow position:
               chr28:22739811-22739597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 48
               

               Conread position:
               157-428
               

               Cow position:
               chr28:6307911-6307641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 68
               

               Conread position:
               157-481
               

               Cow position:
               chr28:10762680-10762371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               46, 36
               

               Conread position:
               157-491
               

               Cow position:
               chr28:16441397-16441076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 9
               

               Conread position:
               157-492
               

               Cow position:
               chr28:4957228-4957559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               134, 45
               

               Conread position:
               157-492
               

               Cow position:
               chr28:10879788-10879459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               49, 70
               

               Conread position:
               158-409
               

               Cow position:
               chr28:10212699-10212930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               122, 24
               

               Conread position:
               158-411
               

               Cow position:
               chr28:19394637-19394395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               199
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               46, 35
               

               Conread position:
               158-422
               

               Cow position:
               chr28:1583113-1582847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               122, 50
               

               Conread position:
               158-448
               

               Cow position:
               chr28:29455642-29455928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               121, 36
               

               Conread position:
               158-492
               

               Cow position:
               chr28:3751332-3751004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 57
               

               Conread position:
               158-492
               

               Cow position:
               chr28:10900835-10900505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 35
               

               Conread position:
               159-396
               

               Cow position:
               chr28:10478326-10478562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               121, 56
               

               Conread position:
               159-492
               

               Cow position:
               chr28:3474978-3474657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 34
               

               Conread position:
               159-498
               

               Cow position:
               chr28:9390348-9390686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 11
               

               Conread position:
               162-415
               

               Cow position:
               chr28:7547313-7547585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               43, 29
               

               Conread position:
               162-490
               

               Cow position:
               chr28:17029703-17030022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 31
               

               Conread position:
               162-492
               

               Cow position:
               chr28:15713274-15712949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               219
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               113, 43
               

               Conread position:
               162-509
               

               Cow position:
               chr28:6577654-6577325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               336, 5
               

               Conread position:
               164-458
               

               Cow position:
               chr28:22170697-22171000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 66
               

               Conread position:
               165-461
               

               Cow position:
               chr28:26784452-26784752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 61
               

               Conread position:
               166-406
               

               Cow position:
               chr28:8656736-8656965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               187
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               113, 27
               

               Conread position:
               167-497
               

               Cow position:
               chr28:16363956-16364291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 26
               

               Conread position:
               168-307
               

               Cow position:
               chr28:5838547-5838407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               109, 25
               

               Conread position:
               168-319
               

               Cow position:
               chr28:1096318-1096180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               109, 25
               

               Conread position:
               168-492
               

               Cow position:
               chr28:23840212-23839897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 58
               

               Conread position:
               172-403
               

               Cow position:
               chr28:12987411-12987174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               107, 47
               

               Conread position:
               172-492
               

               Cow position:
               chr28:7590177-7590498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 25
               

               Conread position:
               173-414
               

               Cow position:
               chr28:5658547-5658317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               186
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               173-491
               

               Cow position:
               chr28:31971750-31972066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               42, 55
               

               Conread position:
               174-492
               

               Cow position:
               chr28:18096984-18096662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               11, 27
               

               Conread position:
               174-507
               

               Cow position:
               chr28:27428749-27428424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               244
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               30, 19
               

               Conread position:
               176-492
               

               Cow position:
               chr28:1213543-1213864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               64, 44
               

               Conread position:
               177-497
               

               Cow position:
               chr28:2124428-2124119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 47
               

               Conread position:
               184-492
               

               Cow position:
               chr28:5826093-5825781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               217
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               106, 24
               

               Conread position:
               186-420
               

               Cow position:
               chr28:6051725-6051490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               22, 39
               

               Conread position:
               187-437
               

               Cow position:
               chr28:28414663-28414410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               81, 40
               

               Conread position:
               191-363
               

               Cow position:
               chr28:8935925-8935747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               191-492
               

               Cow position:
               chr28:13356590-13356897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 34
               

               Conread position:
               192-436
               

               Cow position:
               chr28:23869456-23869211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               81, 32
               

               Conread position:
               192-491
               

               Cow position:
               chr28:10642032-10642330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               216
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               23, 36
               

               Conread position:
               192-492
               

               Cow position:
               chr28:22040038-22040343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               12, 43
               

               Conread position:
               193-414
               

               Cow position:
               chr28:23776032-23775808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               11, 29
               

               Conread position:
               193-427
               

               Cow position:
               chr28:2905555-2905330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               86, 23
               

               Conread position:
               193-429
               

               Cow position:
               chr28:8348668-8348905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               185
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               86, 31
               

               Conread position:
               193-441
               

               Cow position:
               chr28:13787145-13786896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               88, 10
               

               Conread position:
               194-403
               

               Cow position:
               chr28:13447680-13447482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               83, 30
               

               Conread position:
               194-409
               

               Cow position:
               chr28:2627659-2627877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               85, 26
               

               Conread position:
               194-431
               

               Cow position:
               chr28:13241846-13242078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               183
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               85, 8
               

               Conread position:
               194-466
               

               Cow position:
               chr28:16214921-16215180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               202
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               85, 29
               

               Conread position:
               194-470
               

               Cow position:
               chr28:34852767-34852488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               85, 26
               

               Conread position:
               194-483
               

               Cow position:
               chr28:34082034-34082324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 29
               

               Conread position:
               194-491
               

               Cow position:
               chr28:30099117-30098817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               85, 26
               

               Conread position:
               194-492
               

               Cow position:
               chr28:1810762-1811060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               219
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               11, 23
               

               Conread position:
               194-492
               

               Cow position:
               chr28:7746329-7746021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               85, 26
               

               Conread position:
               194-492
               

               Cow position:
               chr28:12458141-12457841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 14
               

               Conread position:
               194-492
               

               Cow position:
               chr28:24604157-24603864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               194-492
               

               Cow position:
               chr28:30531757-30532058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               85, 26
               

               Conread position:
               194-492
               

               Cow position:
               chr28:33640808-33640504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               85, 27
               

               Conread position:
               195-387
               

               Cow position:
               chr28:31433355-31433162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               84, 20
               

               Conread position:
               195-492
               

               Cow position:
               chr28:6960480-6960181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 19
               

               Conread position:
               196-492
               

               Cow position:
               chr28:11827469-11827171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               231
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               83, 28
               

               Conread position:
               196-492
               

               Cow position:
               chr28:29824428-29824125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               198-491
               

               Cow position:
               chr28:28590715-28590414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               70, 10
               

               Conread position:
               198-492
               

               Cow position:
               chr28:26782064-26781768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 19
               

               Conread position:
               200-411
               

               Cow position:
               chr28:3077966-3077759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               79, 24
               

               Conread position:
               201-438
               

               Cow position:
               chr28:29073777-29074015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               57, 26
               

               Conread position:
               203-429
               

               Cow position:
               chr28:24996615-24996840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 21
               

               Conread position:
               203-492
               

               Cow position:
               chr28:19295386-19295677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 25
               

               Conread position:
               204-492
               

               Cow position:
               chr28:2949514-2949227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               75, 19
               

               Conread position:
               205-397
               

               Cow position:
               chr28:5188433-5188622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               73, 12
               

               Conread position:
               205-485
               

               Cow position:
               chr28:16404540-16404256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               10, 19
               

               Conread position:
               205-492
               

               Cow position:
               chr28:2279694-2279982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 19
               

               Conread position:
               206-492
               

               Cow position:
               chr28:11451493-11451790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 18
               

               Conread position:
               207-490
               

               Cow position:
               chr28:23231095-23231378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 21
               

               Conread position:
               210-492
               

               Cow position:
               chr28:22300922-22300645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               97, 47
               

               Conread position:
               214-431
               

               Cow position:
               chr28:17625169-17625388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               49, 13
               

               Conread position:
               214-432
               

               Cow position:
               chr28:34150564-34150786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               54, 13
               

               Conread position:
               214-492
               

               Cow position:
               chr28:10888627-10888348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 10
               

               Conread position:
               216-491
               

               Cow position:
               chr28:17738113-17738393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 8
               

               Conread position:
               219-497
               

               Cow position:
               chr28:29806227-29806517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               60, 5
               

               Conread position:
               220-490
               

               Cow position:
               chr28:33943645-33943921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               60, 43
               

               Conread position:
               220-492
               

               Cow position:
               chr28:34626996-34626719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               198
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               59, 26
               

               Conread position:
               224-428
               

               Cow position:
               chr28:7328849-7328651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               162
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               55, 14
               

               Conread position:
               224-448
               

               Cow position:
               chr28:32275303-32275073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               224-492
               

               Cow position:
               chr28:6650767-6651041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               224-492
               

               Cow position:
               chr28:12702081-12701807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               224-492
               

               Cow position:
               chr28:15616764-15616490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               224-492
               

               Cow position:
               chr28:19186437-19186163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               224-492
               

               Cow position:
               chr28:22304799-22304542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               56, 14
               

               Conread position:
               224-492
               

               Cow position:
               chr28:24993701-24993427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               225-353
               

               Cow position:
               chr28:26264759-26264627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               225-414
               

               Cow position:
               chr28:9294967-9294776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               114, 93
               

               Conread position:
               225-439
               

               Cow position:
               chr28:24887336-24887116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               225-491
               

               Cow position:
               chr28:15605736-15605464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               225-492
               

               Cow position:
               chr28:5071202-5071475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               225-492
               

               Cow position:
               chr28:7830777-7830504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               225-492
               

               Cow position:
               chr28:10563604-10563334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               56, 188
               

               Conread position:
               225-492
               

               Cow position:
               chr28:12117026-12117300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               225-492
               

               Cow position:
               chr28:16598362-16598087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               56, 235
               

               Conread position:
               225-492
               

               Cow position:
               chr28:23309123-23309396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               225-492
               

               Cow position:
               chr28:23686251-23685978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               225-492
               

               Cow position:
               chr28:27939033-27938760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               225-492
               

               Cow position:
               chr28:33689722-33689449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               226-438
               

               Cow position:
               chr28:15688992-15688780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               42, 95
               

               Conread position:
               226-476
               

               Cow position:
               chr28:16350103-16350339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               181, 41
               

               Conread position:
               226-492
               

               Cow position:
               chr28:23212029-23212300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               196
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               55, 211
               

               Conread position:
               228-500
               

               Cow position:
               chr28:13371223-13371490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 88
               

               Conread position:
               229-492
               

               Cow position:
               chr28:3246280-3246027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               198
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               51, 39
               

               Conread position:
               235-490
               

               Cow position:
               chr28:28214191-28213930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               238-407
               

               Cow position:
               chr28:7980475-7980649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               238-444
               

               Cow position:
               chr28:2941-3151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               238-492
               

               Cow position:
               chr28:16182547-16182288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               240-336
               

               Cow position:
               chr28:19015346-19015444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               85
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               240-478
               

               Cow position:
               chr28:22254003-22254247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               240-492
               

               Cow position:
               chr28:21129188-21129438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               40, 135
               

               Conread position:
               241-416
               

               Cow position:
               chr28:10456588-10456761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               49, 24
               

               Conread position:
               241-438
               

               Cow position:
               chr28:32747862-32747678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               241-470
               

               Cow position:
               chr28:16622948-16622720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               38, 78
               

               Conread position:
               241-473
               

               Cow position:
               chr28:11355986-11356220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               113, 42
               

               Conread position:
               241-490
               

               Cow position:
               chr28:5805454-5805206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               195
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               38, 94
               

               Conread position:
               241-492
               

               Cow position:
               chr28:481513-481770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               241-492
               

               Cow position:
               chr28:5311153-5311410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               241-492
               

               Cow position:
               chr28:6534600-6534857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               40, 97
               

               Conread position:
               241-492
               

               Cow position:
               chr28:9709957-9710214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               241-492
               

               Cow position:
               chr28:10192838-10193095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               241-492
               

               Cow position:
               chr28:10868214-10868471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               241-492
               

               Cow position:
               chr28:13322806-13323063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               241-492
               

               Cow position:
               chr28:15916331-15916588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               241-492
               

               Cow position:
               chr28:22208585-22208842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               241-492
               

               Cow position:
               chr28:32785032-32785284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               38, 80
               

               Conread position:
               242-487
               

               Cow position:
               chr28:20759984-20760236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               242-492
               

               Cow position:
               chr28:17762599-17762343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               14, 205
               

               Conread position:
               243-400
               

               Cow position:
               chr28:2888366-2888206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               38, 104
               

               Conread position:
               246-503
               

               Cow position:
               chr28:3161138-3161404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               30, 39
               

               Conread position:
               247-429
               

               Cow position:
               chr28:32813063-32813251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               30, 131
               

               Conread position:
               247-443
               

               Cow position:
               chr28:22136915-22137114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               7, 59
               

               Conread position:
               247-488
               

               Cow position:
               chr28:5054091-5054338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               29, 240
               

               Conread position:
               249-468
               

               Cow position:
               chr28:26723605-26723385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               30, 72
               

               Conread position:
               249-473
               

               Cow position:
               chr28:10303847-10303621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               75, 30
               

               Conread position:
               249-492
               

               Cow position:
               chr28:12980614-12980868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               251-470
               

               Cow position:
               chr28:16388558-16388353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               28, 89
               

               Conread position:
               252-415
               

               Cow position:
               chr28:13902038-13902197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               253-491
               

               Cow position:
               chr28:25334945-25334705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               89, 30
               

               Conread position:
               254-496
               

               Cow position:
               chr28:31142042-31142283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               24, 64
               

               Conread position:
               255-448
               

               Cow position:
               chr28:16450780-16450965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               24, 61
               

               Conread position:
               255-492
               

               Cow position:
               chr28:8372397-8372156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 191
               

               Conread position:
               257-492
               

               Cow position:
               chr28:3480193-3479950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               257-492
               

               Cow position:
               chr28:25693632-25693873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               24, 84
               

               Conread position:
               258-492
               

               Cow position:
               chr28:8972878-8972657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               14, 26
               

               Conread position:
               258-492
               

               Cow position:
               chr28:22582954-22582721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               60, 76
               

               Conread position:
               259-480
               

               Cow position:
               chr28:16879354-16879568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               176
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               20, 76
               

               Conread position:
               261-478
               

               Cow position:
               chr28:8740521-8740304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               18, 66
               

               Conread position:
               262-489
               

               Cow position:
               chr28:7013669-7013901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               16, 37
               

               Conread position:
               262-492
               

               Cow position:
               chr28:6047967-6047731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               263-492
               

               Cow position:
               chr28:2615649-2615884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               263-492
               

               Cow position:
               chr28:10455610-10455845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               263-492
               

               Cow position:
               chr28:10871264-10871029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               264-491
               

               Cow position:
               chr28:7009100-7009320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               16, 22
               

               Conread position:
               265-479
               

               Cow position:
               chr28:10296112-10295890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               15, 192
               

               Conread position:
               266-492
               

               Cow position:
               chr28:16925300-16925526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               146
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               268-492
               

               Cow position:
               chr28:3740755-3740537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               11, 47
               

               Conread position:
               269-492
               

               Cow position:
               chr28:27755123-27754895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               21, 10
               

               Conread position:
               271-487
               

               Cow position:
               chr28:28792378-28792163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               9, 39
               

               Conread position:
               271-492
               

               Cow position:
               chr28:5371000-5371223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               7, 173
               

               Conread position:
               272-432
               

               Cow position:
               chr28:7697098-7697257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               272-492
               

               Cow position:
               chr28:28779473-28779262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               275-492
               

               Cow position:
               chr28:11923911-11924134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               6, 12
               

               Conread position:
               275-492
               

               Cow position:
               chr28:30250289-30250066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               276-438
               

               Cow position:
               chr28:31415527-31415688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               150, 123
               

               Conread position:
               277-428
               

               Cow position:
               chr28:13936316-13936165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               277-492
               

               Cow position:
               chr28:7372351-7372566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 107
               

               Conread position:
               277-492
               

               Cow position:
               chr28:34656244-34656024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               40, 9
               

               Conread position:
               279-490
               

               Cow position:
               chr28:33234990-33234774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               279-492
               

               Cow position:
               chr28:3011528-3011735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               63, 87
               

               Conread position:
               283-402
               

               Cow position:
               chr28:8628883-8629002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               283-438
               

               Cow position:
               chr28:22051666-22051506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               285-492
               

               Cow position:
               chr28:4047035-4046832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               117, 67
               

               Conread position:
               285-492
               

               Cow position:
               chr28:19564699-19564908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               163
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               286-419
               

               Cow position:
               chr28:25498609-25498746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               286-421
               

               Cow position:
               chr28:7389218-7389081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               53, 93
               

               Conread position:
               286-424
               

               Cow position:
               chr28:22583523-22583385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               53, 114
               

               Conread position:
               286-427
               

               Cow position:
               chr28:16475884-16475745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               78, 68
               

               Conread position:
               286-428
               

               Cow position:
               chr28:19133678-19133532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               286-432
               

               Cow position:
               chr28:5255640-5255495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               286-452
               

               Cow position:
               chr28:23111829-23111659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               286-491
               

               Cow position:
               chr28:12938891-12938688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               286-491
               

               Cow position:
               chr28:13719410-13719206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               20, 132
               

               Conread position:
               286-491
               

               Cow position:
               chr28:18180245-18180449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               117, 148
               

               Conread position:
               286-491
               

               Cow position:
               chr28:19358315-19358528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               286-492
               

               Cow position:
               chr28:2512476-2512686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               287-458
               

               Cow position:
               chr28:3463046-3462876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               57, 109
               

               Conread position:
               287-492
               

               Cow position:
               chr28:1885121-1884911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               288-429
               

               Cow position:
               chr28:12933873-12934014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               289-428
               

               Cow position:
               chr28:25291241-25291102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               289-492
               

               Cow position:
               chr28:16246378-16246580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               32, 110
               

               Conread position:
               291-492
               

               Cow position:
               chr28:16364909-16365116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               51, 96
               

               Conread position:
               292-492
               

               Cow position:
               chr28:4058613-4058412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               47, 159
               

               Conread position:
               292-492
               

               Cow position:
               chr28:7485291-7485493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               293-451
               

               Cow position:
               chr28:2864368-2864519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               293-458
               

               Cow position:
               chr28:757380-757544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               27, 117
               

               Conread position:
               293-492
               

               Cow position:
               chr28:7882694-7882489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               46, 162
               

               Conread position:
               293-492
               

               Cow position:
               chr28:14742689-14742485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               293-492
               

               Cow position:
               chr28:31223709-31223909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               56, 33
               

               Conread position:
               294-457
               

               Cow position:
               chr28:8103505-8103669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               45, 102
               

               Conread position:
               295-429
               

               Cow position:
               chr28:34122975-34123106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               41, 47
               

               Conread position:
               298-467
               

               Cow position:
               chr28:5837992-5837822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               302-485
               

               Cow position:
               chr28:23253922-23254098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               37, 69
               

               Conread position:
               302-492
               

               Cow position:
               chr28:1315916-1316105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               28, 129
               

               Conread position:
               306-490
               

               Cow position:
               chr28:22358414-22358234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               307-491
               

               Cow position:
               chr28:16003937-16003752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               308-465
               

               Cow position:
               chr28:18558864-18559020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 26
               

               Conread position:
               308-492
               

               Cow position:
               chr28:7945888-7946071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               10, 26
               

               Conread position:
               308-492
               

               Cow position:
               chr28:10463738-10463921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               93, 11
               

               Conread position:
               308-492
               

               Cow position:
               chr28:23114415-23114598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               10, 26
               

               Conread position:
               314-460
               

               Cow position:
               chr28:1537573-1537420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               31, 115
               

               Conread position:
               314-492
               

               Cow position:
               chr28:3097918-3097741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               314-492
               

               Cow position:
               chr28:9647163-9647341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               25, 135
               

               Conread position:
               315-410
               

               Cow position:
               chr28:34844388-34844483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               83
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-427
               

               Cow position:
               chr28:3726524-3726413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               316-465
               

               Cow position:
               chr28:15965491-15965638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               316-492
               

               Cow position:
               chr28:24994716-24994536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               316-492
               

               Cow position:
               chr28:25128124-25128298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               318-492
               

               Cow position:
               chr28:28185654-28185487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               319-491
               

               Cow position:
               chr28:10577759-10577931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               323-481
               

               Cow position:
               chr28:17613218-17613058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               325-492
               

               Cow position:
               chr28:3427008-3427176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               14, 125
               

               Conread position:
               325-492
               

               Cow position:
               chr28:22344556-22344391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               332-479
               

               Cow position:
               chr28:23281374-23281524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               336-492
               

               Cow position:
               chr28:7443900-7443744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               341-492
               

               Cow position:
               chr28:24694415-24694264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               341-492
               

               Cow position:
               chr28:33032067-33031917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               342-492
               

               Cow position:
               chr28:19194597-19194446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               342-492
               

               Cow position:
               chr28:27995151-27995002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               345-486
               

               Cow position:
               chr28:8290569-8290426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               349-492
               

               Cow position:
               chr28:25768302-25768158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               352-492
               

               Cow position:
               chr28:29942978-29942837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               87, 56
               

               Conread position:
               353-492
               

               Cow position:
               chr28:32824187-32824044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               354-492
               

               Cow position:
               chr28:3202960-3202824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               357-492
               

               Cow position:
               chr28:2842392-2842260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               118, 10
               

               Conread position:
               359-491
               

               Cow position:
               chr28:25476631-25476498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               360-492
               

               Cow position:
               chr28:5110539-5110671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               360-492
               

               Cow position:
               chr28:10980957-10980825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-117
Cow position:	chr28:3311047-3311165 (view UCSC Genome Browser custom track)
Alignm length:	120
Alignm identity:	98
Alignm E-value:	7e-24
Alignm gaps (pig, cow):	54, 80
Conread position:	1-124
Cow position:	chr28:4588489-4588370 (view UCSC Genome Browser custom track)
Alignm length:	124
Alignm identity:	99
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	52, 0
Conread position:	1-126
Cow position:	chr28:16856932-16857057 (view UCSC Genome Browser custom track)
Alignm length:	127
Alignm identity:	98
Alignm E-value:	5e-22
Alignm gaps (pig, cow):	53, 78
Conread position:	1-132
Cow position:	chr28:4866404-4866529 (view UCSC Genome Browser custom track)
Alignm length:	132
Alignm identity:	105
Alignm E-value:	7e-24
Alignm gaps (pig, cow):	41, 0
Conread position:	1-133
Cow position:	chr28:3759171-3759033 (view UCSC Genome Browser custom track)
Alignm length:	140
Alignm identity:	108
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	35, 81
Conread position:	1-139
Cow position:	chr28:16569978-16569842 (view UCSC Genome Browser custom track)
Alignm length:	140
Alignm identity:	113
Alignm E-value:	3e-28
Alignm gaps (pig, cow):	63, 75
Conread position:	1-140
Cow position:	chr28:11562069-11562210 (view UCSC Genome Browser custom track)
Alignm length:	143
Alignm identity:	108
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	54, 82
Conread position:	1-141
Cow position:	chr28:26867980-26868116 (view UCSC Genome Browser custom track)
Alignm length:	142
Alignm identity:	109
Alignm E-value:	6e-23
Alignm gaps (pig, cow):	60, 50
Conread position:	1-142
Cow position:	chr28:2151263-2151406 (view UCSC Genome Browser custom track)
Alignm length:	145
Alignm identity:	114
Alignm E-value:	9e-27
Alignm gaps (pig, cow):	9, 77
Conread position:	1-152
Cow position:	chr28:11305461-11305611 (view UCSC Genome Browser custom track)
Alignm length:	154
Alignm identity:	117
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	141, 49
Conread position:	1-155
Cow position:	chr28:5609744-5609896 (view UCSC Genome Browser custom track)
Alignm length:	155
Alignm identity:	119
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	54, 0
Conread position:	1-157
Cow position:	chr28:22085371-22085523 (view UCSC Genome Browser custom track)
Alignm length:	157
Alignm identity:	117
Alignm E-value:	7e-25
Alignm gaps (pig, cow):	48, 0
Conread position:	1-158
Cow position:	chr28:7413837-7413677 (view UCSC Genome Browser custom track)
Alignm length:	162
Alignm identity:	117
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	55, 72
Conread position:	1-160
Cow position:	chr28:2825596-2825435 (view UCSC Genome Browser custom track)
Alignm length:	163
Alignm identity:	117
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	38, 80
Conread position:	1-162
Cow position:	chr28:10252741-10252903 (view UCSC Genome Browser custom track)
Alignm length:	164
Alignm identity:	116
Alignm E-value:	5e-21
Alignm gaps (pig, cow):	47, 79
Conread position:	1-165
Cow position:	chr28:2821435-2821262 (view UCSC Genome Browser custom track)
Alignm length:	175
Alignm identity:	127
Alignm E-value:	5e-21
Alignm gaps (pig, cow):	46, 72
Conread position:	1-166
Cow position:	chr28:7644918-7644750 (view UCSC Genome Browser custom track)
Alignm length:	171
Alignm identity:	132
Alignm E-value:	1e-29
Alignm gaps (pig, cow):	54, 80
Conread position:	1-169
Cow position:	chr28:117584-117756 (view UCSC Genome Browser custom track)
Alignm length:	174
Alignm identity:	134
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	19, 82
Conread position:	1-170
Cow position:	chr28:9109385-9109222 (view UCSC Genome Browser custom track)
Alignm length:	170
Alignm identity:	129
Alignm E-value:	3e-28
Alignm gaps (pig, cow):	41, 0
Conread position:	1-173
Cow position:	chr28:19994772-19994943 (view UCSC Genome Browser custom track)
Alignm length:	176
Alignm identity:	132
Alignm E-value:	3e-28
Alignm gaps (pig, cow):	44, 136