Cow genome map

Conread name: Ss1.1-Emb1-C0005195_K03.5

Conread position: 1-114
Cow position: chrX:40108146-40108259 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 70, 54

Conread position: 1-117
Cow position: chrX:35509482-35509598 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-121
Cow position: chrX:4366543-4366422 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 57, 70

Conread position: 1-121
Cow position: chrX:31279729-31279847 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 1-125
Cow position: chrX:4486826-4486951 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 1-127
Cow position: chrX:3494852-3494974 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 1-127
Cow position: chrX:28107044-28106918 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 55, 78

Conread position: 1-131
Cow position: chrX:41215521-41215389 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 111
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 54, 77

Conread position: 1-132
Cow position: chrX:6480397-6480530 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 47, 72

Conread position: 1-132
Cow position: chrX:40556265-40556393 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 86, 31

Conread position: 1-133
Cow position: chrX:11529536-11529408 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 1-133
Cow position: chrX:11602286-11602418 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 63, 72

Conread position: 1-133
Cow position: chrX:39642430-39642557 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 1-133
Cow position: chrX:42087027-42086892 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 5, 73

Conread position: 1-138
Cow position: chrX:11589169-11589307 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 37, 76

Conread position: 1-141
Cow position: chrX:23497499-23497634 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 115
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 52, 0

Conread position: 1-143
Cow position: chrX:15100176-15100038 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 1-144
Cow position: chrX:41199420-41199278 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 101, 52

Conread position: 1-146
Cow position: chrX:41166631-41166773 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 1-148
Cow position: chrX:10237715-10237863 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 54, 81

Conread position: 1-148
Cow position: chrX:36568859-36569006 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 121, 79

Conread position: 1-148
Cow position: chrX:47100396-47100547 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 58, 82

Conread position: 1-149
Cow position: chrX:41363652-41363810 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 1-152
Cow position: chrX:37867631-37867477 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 56, 82

Conread position: 1-155
Cow position: chrX:5097595-5097756 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 53, 74

Conread position: 1-155
Cow position: chrX:8759821-8759670 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 46, 72

Conread position: 1-155
Cow position: chrX:25286524-25286678 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 84, 38

Conread position: 1-155
Cow position: chrX:31983380-31983542 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 1-155
Cow position: chrX:32747923-32747775 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 1-156
Cow position: chrX:46068565-46068717 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 1-157
Cow position: chrX:41453497-41453343 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 1-158
Cow position: chrX:27415390-27415540 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 1-158
Cow position: chrX:35409950-35409792 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 54, 81

Conread position: 1-158
Cow position: chrX:45759867-45759711 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 19, 55

Conread position: 1-160
Cow position: chrX:19795311-19795466 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 57, 70

Conread position: 1-160
Cow position: chrX:34991559-34991402 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 1-160
Cow position: chrX:37751913-37752068 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 1-161
Cow position: chrX:16556025-16556180 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 1-161
Cow position: chrX:42760451-42760289 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 82

Conread position: 1-161
Cow position: chrX:42875407-42875250 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 48, 0

Conread position: 1-165
Cow position: chrX:597280-597441 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 54, 80

Conread position: 1-166
Cow position: chrX:37749791-37749951 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 1-166
Cow position: chrX:40649100-40648928 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 37, 78

Conread position: 1-166
Cow position: chrX:47755846-47756008 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 1-166
Cow position: chrX:48822144-48822310 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 54, 70

Conread position: 1-167
Cow position: chrX:37867452-37867283 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 46, 82

Conread position: 1-168
Cow position: chrX:31986374-31986544 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 49, 81

Conread position: 1-168
Cow position: chrX:36722615-36722775 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 1-169
Cow position: chrX:34270759-34270592 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 54, 32

Conread position: 1-169
Cow position: chrX:34398585-34398755 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 55, 82

Conread position: 1-169
Cow position: chrX:44995698-44995527 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 54, 80

Conread position: 1-169
Cow position: chrX:48118538-48118703 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 51, 63

Conread position: 1-170
Cow position: chrX:2314420-2314591 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 139
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 54, 82

Conread position: 1-171
Cow position: chrX:46079289-46079112 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 54, 8

Conread position: 1-172
Cow position: chrX:23358919-23359085 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 64, 0

Conread position: 1-174
Cow position: chrX:51704-51872 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 54, 78

Conread position: 1-174
Cow position: chrX:16763732-16763903 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 148, 51

Conread position: 1-174
Cow position: chrX:32867068-32866899 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 39, 0

Conread position: 1-175
Cow position: chrX:32235548-32235719 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 18, 12

Conread position: 1-178
Cow position: chrX:24425803-24425982 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 1-178
Cow position: chrX:28068049-28067870 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 40, 82

Conread position: 1-179
Cow position: chrX:41809977-41810149 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 1-182
Cow position: chrX:20583861-20583682 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 144
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 54, 0

Conread position: 1-183
Cow position: chrX:908139-907961 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 88, 63

Conread position: 1-184
Cow position: chrX:29467584-29467764 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 1-186
Cow position: chrX:19356662-19356481 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 80

Conread position: 1-190
Cow position: chrX:16323817-16324006 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 60, 74

Conread position: 1-191
Cow position: chrX:1122348-1122536 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 78

Conread position: 1-191
Cow position: chrX:38302012-38301816 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 158
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 42, 81

Conread position: 1-192
Cow position: chrX:8642243-8642054 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 54, 80

Conread position: 1-193
Cow position: chrX:19717712-19717527 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 52, 0

Conread position: 1-196
Cow position: chrX:17524185-17524381 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 54, 81

Conread position: 1-196
Cow position: chrX:35658995-35658802 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 49, 77

Conread position: 1-197
Cow position: chrX:19018630-19018830 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 41, 79

Conread position: 1-198
Cow position: chrX:34420934-34420735 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 82

Conread position: 1-199
Cow position: chrX:16836096-16836286 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 1-201
Cow position: chrX:29478920-29478722 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 155
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 63, 80

Conread position: 1-202
Cow position: chrX:27668764-27668964 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 189, 17

Conread position: 1-202
Cow position: chrX:44040375-44040178 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 54, 82

Conread position: 1-204
Cow position: chrX:11762813-11763007 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 48, 0

Conread position: 1-204
Cow position: chrX:30672186-30672401 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 46, 85

Conread position: 1-204
Cow position: chrX:32574514-32574312 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 54, 31

Conread position: 1-204
Cow position: chrX:43008808-43008605 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 49, 82

Conread position: 1-206
Cow position: chrX:23335777-23335979 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 46, 80

Conread position: 1-210
Cow position: chrX:26843068-26843281 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 56, 84

Conread position: 1-211
Cow position: chrX:3806876-3806670 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 1-215
Cow position: chrX:27074853-27075066 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 169
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 48, 76

Conread position: 1-215
Cow position: chrX:42282775-42282559 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 45, 77

Conread position: 1-215
Cow position: chrX:42449815-42450033 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 173
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 54, 81

Conread position: 1-233
Cow position: chrX:44660390-44660622 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 42, 152

Conread position: 1-234
Cow position: chrX:43150629-43150385 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 54, 77

Conread position: 1-236
Cow position: chrX:42894120-42893880 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 182
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 159, 36

Conread position: 1-239
Cow position: chrX:24749285-24749047 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 57, 33

Conread position: 1-239
Cow position: chrX:47061585-47061354 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 162
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 195, 52

Conread position: 1-243
Cow position: chrX:48121007-48121243 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 202, 39

Conread position: 1-244
Cow position: chrX:4645716-4645957 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 78

Conread position: 1-245
Cow position: chrX:36391990-36392234 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 128, 68

Conread position: 1-246
Cow position: chrX:36367736-36367989 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 54, 82

Conread position: 1-248
Cow position: chrX:22392790-22393035 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 188
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 200, 54

Conread position: 1-256
Cow position: chrX:19469317-19469563 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 201, 50

Conread position: 1-257
Cow position: chrX:30532-30271 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 177
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 56, 82

Conread position: 1-259
Cow position: chrX:27511619-27511367 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 37

Conread position: 1-259
Cow position: chrX:39352970-39352720 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 199
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 183, 37

Conread position: 1-261
Cow position: chrX:44702867-44703134 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 31, 36

Conread position: 1-262
Cow position: chrX:13147178-13146918 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 177
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 54, 80

Conread position: 1-264
Cow position: chrX:2674759-2675022 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 177
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 54, 139

Conread position: 1-265
Cow position: chrX:5063436-5063187 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 182
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 70

Conread position: 1-266
Cow position: chrX:13122142-13121863 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-267
Cow position: chrX:5134672-5134404 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 189
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 31, 108

Conread position: 1-271
Cow position: chrX:25037190-25036915 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 74

Conread position: 1-272
Cow position: chrX:1087950-1088209 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 201, 39

Conread position: 1-275
Cow position: chrX:36866371-36866095 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 82

Conread position: 1-277
Cow position: chrX:22284037-22283754 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 188
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 56, 156

Conread position: 1-277
Cow position: chrX:39220284-39220002 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 84

Conread position: 1-284
Cow position: chrX:6559258-6559531 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 207
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 54, 81

Conread position: 1-284
Cow position: chrX:33800519-33800237 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 182
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 63, 175

Conread position: 1-285
Cow position: chrX:35590560-35590844 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 193
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 54, 83

Conread position: 1-287
Cow position: chrX:48071360-48071072 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 194
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 65, 216

Conread position: 1-289
Cow position: chrX:27261389-27261097 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 79

Conread position: 1-290
Cow position: chrX:33654645-33654933 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 56, 81

Conread position: 1-294
Cow position: chrX:4296626-4296916 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 204
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 65, 187

Conread position: 1-294
Cow position: chrX:12095573-12095870 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 81

Conread position: 1-294
Cow position: chrX:25282816-25283110 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 46, 113

Conread position: 1-294
Cow position: chrX:42855661-42855360 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 83

Conread position: 1-297
Cow position: chrX:10516452-10516157 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 71

Conread position: 1-301
Cow position: chrX:40337109-40336797 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 220
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 54, 72

Conread position: 1-302
Cow position: chrX:34836873-34837158 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 276, 52

Conread position: 1-305
Cow position: chrX:13924059-13923764 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 209
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 274, 54

Conread position: 1-308
Cow position: chrX:46546676-46546987 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 207
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 54, 83

Conread position: 1-309
Cow position: chrX:46022973-46022677 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 212
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 54, 80

Conread position: 1-311
Cow position: chrX:13853802-13853509 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 223
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 199, 41

Conread position: 1-311
Cow position: chrX:26881364-26881681 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 17

Conread position: 1-312
Cow position: chrX:38654234-38654544 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 79

Conread position: 1-312
Cow position: chrX:46291339-46291025 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 226
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 109, 55

Conread position: 1-318
Cow position: chrX:4403516-4403194 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 231
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 54, 80

Conread position: 1-320
Cow position: chrX:17949294-17949612 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 220
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 65, 171

Conread position: 1-320
Cow position: chrX:40320605-40320283 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 219
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 54, 83

Conread position: 1-325
Cow position: chrX:34222911-34222586 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 77

Conread position: 1-328
Cow position: chrX:43115347-43115021 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 75

Conread position: 1-329
Cow position: chrX:34504855-34505178 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 41

Conread position: 1-334
Cow position: chrX:36393143-36393483 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 227
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 54, 83

Conread position: 1-334
Cow position: chrX:45977122-45976784 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 8

Conread position: 1-337
Cow position: chrX:18204265-18204602 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 80

Conread position: 1-342
Cow position: chrX:15231461-15231798 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 232
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 55, 214

Conread position: 1-342
Cow position: chrX:34314219-34313889 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 54

Conread position: 1-343
Cow position: chrX:29723949-29723596 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 79

Conread position: 1-347
Cow position: chrX:869984-870315 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 235
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 24, 18

Conread position: 1-361
Cow position: chrX:41068918-41068564 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 41

Conread position: 1-363
Cow position: chrX:14275550-14275901 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 254
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 182, 52

Conread position: 1-367
Cow position: chrX:35885534-35885899 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 52

Conread position: 1-368
Cow position: chrX:14955570-14955938 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 260
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 53, 82

Conread position: 1-368
Cow position: chrX:22921519-22921143 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 261
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 65, 97

Conread position: 1-368
Cow position: chrX:25207663-25208017 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 48

Conread position: 1-369
Cow position: chrX:169343-169697 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 75

Conread position: 1-369
Cow position: chrX:4399316-4398954 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 75

Conread position: 1-369
Cow position: chrX:6407742-6407377 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 72

Conread position: 1-369
Cow position: chrX:22387042-22387419 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 152

Conread position: 1-369
Cow position: chrX:34792122-34792482 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 40

Conread position: 1-369
Cow position: chrX:37956046-37955666 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 81

Conread position: 1-374
Cow position: chrX:27145797-27145446 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 52

Conread position: 1-376
Cow position: chrX:36061357-36060973 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 258
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 62, 94

Conread position: 1-380
Cow position: chrX:32821238-32820847 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 88

Conread position: 1-383
Cow position: chrX:35382844-35383205 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 35

Conread position: 1-390
Cow position: chrX:8869206-8869601 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 54

Conread position: 1-393
Cow position: chrX:7863382-7863768 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 263
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 62, 188

Conread position: 1-393
Cow position: chrX:47484064-47484467 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 84

Conread position: 1-395
Cow position: chrX:33001096-33000706 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 52

Conread position: 1-398
Cow position: chrX:43779667-43780053 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 32

Conread position: 1-400
Cow position: chrX:36356302-36355921 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 77

Conread position: 1-403
Cow position: chrX:39938340-39938728 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 40

Conread position: 1-404
Cow position: chrX:16996691-16996300 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 278
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 54, 195

Conread position: 1-405
Cow position: chrX:44397209-44396807 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 113

Conread position: 1-406
Cow position: chrX:45110849-45110447 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 52

Conread position: 1-407
Cow position: chrX:9425564-9425951 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 20

Conread position: 1-407
Cow position: chrX:40035241-40035655 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 77

Conread position: 1-409
Cow position: chrX:29542030-29542430 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 75

Conread position: 1-410
Cow position: chrX:27175198-27174782 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 83

Conread position: 1-412
Cow position: chrX:34412046-34411625 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 78

Conread position: 1-415
Cow position: chrX:11633880-11633461 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 76

Conread position: 1-415
Cow position: chrX:36283538-36283128 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 83

Conread position: 1-415
Cow position: chrX:48237014-48236594 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 69

Conread position: 1-416
Cow position: chrX:29601631-29602051 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 70

Conread position: 1-421
Cow position: chrX:16541458-16541899 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 83

Conread position: 1-424
Cow position: chrX:22074994-22074574 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 17

Conread position: 1-428
Cow position: chrX:7722175-7721754 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 62

Conread position: 1-429
Cow position: chrX:4768926-4768519 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 48

Conread position: 1-429
Cow position: chrX:22822253-22821816 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 89

Conread position: 1-429
Cow position: chrX:27515057-27514637 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 187

Conread position: 1-429
Cow position: chrX:36976150-36975718 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 82

Conread position: 1-432
Cow position: chrX:36198174-36197733 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 291
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 20, 33

Conread position: 1-432
Cow position: chrX:38549644-38549214 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 32

Conread position: 1-434
Cow position: chrX:12979637-12980065 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 69

Conread position: 1-434
Cow position: chrX:30962677-30963108 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 196

Conread position: 1-434
Cow position: chrX:35543082-35542655 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 62

Conread position: 1-438
Cow position: chrX:21672760-21672311 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 201

Conread position: 1-438
Cow position: chrX:32420409-32419970 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 80

Conread position: 1-438
Cow position: chrX:34543984-34543547 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 83

Conread position: 1-438
Cow position: chrX:38935477-38935041 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 90

Conread position: 1-439
Cow position: chrX:21663493-21663068 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 83

Conread position: 1-439
Cow position: chrX:45449108-45448646 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 302
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 54, 83

Conread position: 1-442
Cow position: chrX:20677565-20677121 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 82

Conread position: 1-445
Cow position: chrX:27431723-27432166 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 54

Conread position: 1-448
Cow position: chrX:13177283-13177717 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 54

Conread position: 1-451
Cow position: chrX:14973559-14973985 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 41

Conread position: 1-451
Cow position: chrX:47991790-47991340 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 290
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 46, 32

Conread position: 1-452
Cow position: chrX:24365624-24366083 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 82

Conread position: 1-452
Cow position: chrX:28877968-28878416 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 87

Conread position: 1-453
Cow position: chrX:41674298-41673848 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 35

Conread position: 1-456
Cow position: chrX:32019935-32020380 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 171

Conread position: 1-457
Cow position: chrX:20152046-20151591 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 36

Conread position: 1-464
Cow position: chrX:27508826-27509285 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 82

Conread position: 1-466
Cow position: chrX:9634991-9635449 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 142

Conread position: 1-467
Cow position: chrX:25815701-25816165 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 83

Conread position: 1-469
Cow position: chrX:8925878-8925431 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 41

Conread position: 1-472
Cow position: chrX:42587224-42587703 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 79

Conread position: 1-478
Cow position: chrX:8731292-8730799 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 82

Conread position: 1-478
Cow position: chrX:13913273-13912799 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 178

Conread position: 1-479
Cow position: chrX:34377137-34376676 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 46

Conread position: 1-480
Cow position: chrX:1055183-1055670 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 82

Conread position: 1-485
Cow position: chrX:42589557-42590045 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 67

Conread position: 1-486
Cow position: chrX:44192244-44192730 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 82

Conread position: 1-487
Cow position: chrX:47344497-47344005 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 85

Conread position: 1-488
Cow position: chrX:161601-161138 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 41

Conread position: 1-488
Cow position: chrX:4268872-4269357 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 41

Conread position: 1-490
Cow position: chrX:6544443-6543964 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 58

Conread position: 1-490
Cow position: chrX:11656276-11655787 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 54

Conread position: 1-490
Cow position: chrX:12437085-12437528 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 32

Conread position: 1-490
Cow position: chrX:47210638-47211142 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 82

Conread position: 1-491
Cow position: chrX:11982337-11981828 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 321
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 29

Conread position: 1-491
Cow position: chrX:25035183-25035679 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 81

Conread position: 1-491
Cow position: chrX:34238921-34238428 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 83

Conread position: 1-492
Cow position: chrX:152103-151607 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 83

Conread position: 1-492
Cow position: chrX:1615860-1616345 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 32

Conread position: 1-492
Cow position: chrX:7351502-7351008 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 87

Conread position: 1-492
Cow position: chrX:8900217-8899730 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 62

Conread position: 1-492
Cow position: chrX:9251965-9252468 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 186

Conread position: 1-492
Cow position: chrX:9650829-9651339 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 54

Conread position: 1-492
Cow position: chrX:10831283-10831806 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 88

Conread position: 1-492
Cow position: chrX:11844042-11844532 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 83

Conread position: 1-492
Cow position: chrX:12250013-12249507 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 32

Conread position: 1-492
Cow position: chrX:12290916-12290443 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 79

Conread position: 1-492
Cow position: chrX:13647586-13648078 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 187

Conread position: 1-492
Cow position: chrX:13868902-13868403 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 82

Conread position: 1-492
Cow position: chrX:15485435-15485919 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 187

Conread position: 1-492
Cow position: chrX:15597226-15596751 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 83

Conread position: 1-492
Cow position: chrX:21064480-21063992 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 216

Conread position: 1-492
Cow position: chrX:21593490-21592992 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 140

Conread position: 1-492
Cow position: chrX:22813263-22812768 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 81

Conread position: 1-492
Cow position: chrX:26493205-26492708 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 82

Conread position: 1-492
Cow position: chrX:27446881-27446397 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 29

Conread position: 1-492
Cow position: chrX:27705785-27705299 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 17

Conread position: 1-492
Cow position: chrX:28632284-28632772 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 82

Conread position: 1-492
Cow position: chrX:28846694-28847170 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 52

Conread position: 1-492
Cow position: chrX:30337756-30338213 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 337
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 54, 125

Conread position: 1-492
Cow position: chrX:31436667-31436186 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 52

Conread position: 1-492
Cow position: chrX:33466823-33466323 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 81

Conread position: 1-492
Cow position: chrX:33855025-33855534 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 54

Conread position: 1-492
Cow position: chrX:34441255-34441741 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 81

Conread position: 1-492
Cow position: chrX:34565483-34565006 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 72

Conread position: 1-492
Cow position: chrX:37489927-37489424 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 91

Conread position: 1-492
Cow position: chrX:38218911-38218424 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 54

Conread position: 1-492
Cow position: chrX:38964295-38963817 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 32

Conread position: 1-492
Cow position: chrX:41790229-41790734 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 36

Conread position: 1-492
Cow position: chrX:42246983-42247470 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 81

Conread position: 1-492
Cow position: chrX:44055001-44054511 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 79

Conread position: 1-492
Cow position: chrX:45502336-45501854 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 28

Conread position: 1-492
Cow position: chrX:47873138-47873635 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 69

Conread position: 1-497
Cow position: chrX:31294371-31294838 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 79

Conread position: 1-497
Cow position: chrX:42994792-42994315 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 62

Conread position: 1-500
Cow position: chrX:41238164-41238665 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 40

Conread position: 1-502
Cow position: chrX:31250588-31250086 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 36

Conread position: 1-505
Cow position: chrX:1175792-1176281 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 27

Conread position: 3-407
Cow position: chrX:47046316-47046729 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 87

Conread position: 3-429
Cow position: chrX:6278296-6278737 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 85

Conread position: 4-103
Cow position: chrX:10479945-10479844 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 77

Conread position: 4-112
Cow position: chrX:1996256-1996366 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 51, 77

Conread position: 4-124
Cow position: chrX:231826-231944 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 54, 44

Conread position: 4-142
Cow position: chrX:4169839-4169975 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 52

Conread position: 4-144
Cow position: chrX:26881884-26882026 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 79

Conread position: 4-146
Cow position: chrX:22552783-22552927 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 43, 69

Conread position: 4-153
Cow position: chrX:6640619-6640474 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 73

Conread position: 4-166
Cow position: chrX:4092120-4091956 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 78

Conread position: 4-167
Cow position: chrX:29451350-29451519 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 41, 81

Conread position: 4-169
Cow position: chrX:46910005-46909844 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 49, 0

Conread position: 4-182
Cow position: chrX:31480161-31479987 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 4-184
Cow position: chrX:32942880-32943062 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 57, 68

Conread position: 4-184
Cow position: chrX:41862555-41862378 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 4-185
Cow position: chrX:1719303-1719128 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 4-188
Cow position: chrX:28837081-28836903 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 51, 79

Conread position: 4-201
Cow position: chrX:11859341-11859539 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 50, 80

Conread position: 4-201
Cow position: chrX:26205259-26205450 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 49, 0

Conread position: 4-201
Cow position: chrX:38587647-38587845 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 158
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 45, 68

Conread position: 4-205
Cow position: chrX:24633889-24633678 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 60, 72

Conread position: 4-209
Cow position: chrX:47079823-47079618 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 41, 190

Conread position: 4-222
Cow position: chrX:28940439-28940221 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 171
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 48, 72

Conread position: 4-233
Cow position: chrX:4289629-4289405 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 152, 38

Conread position: 4-233
Cow position: chrX:48474104-48473873 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 46, 80

Conread position: 4-251
Cow position: chrX:35986015-35985766 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 192
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 42, 76

Conread position: 4-256
Cow position: chrX:40108318-40108573 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 36, 78

Conread position: 4-262
Cow position: chrX:296587-296332 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 187
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 51, 79

Conread position: 4-267
Cow position: chrX:27460061-27459788 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 189
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 52, 68

Conread position: 4-293
Cow position: chrX:38208359-38208637 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 212
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 169, 22

Conread position: 4-293
Cow position: chrX:38560745-38560462 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 205
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 196, 35

Conread position: 4-297
Cow position: chrX:31515366-31515070 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 35

Conread position: 4-299
Cow position: chrX:21328109-21327802 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 78

Conread position: 4-311
Cow position: chrX:42927635-42927932 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 12

Conread position: 4-316
Cow position: chrX:5679735-5680053 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 222
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 37, 74

Conread position: 4-331
Cow position: chrX:41871252-41870938 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 242
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 196, 22

Conread position: 4-333
Cow position: chrX:27302072-27301734 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 233
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 52, 68

Conread position: 4-340
Cow position: chrX:41027355-41027015 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 79

Conread position: 4-341
Cow position: chrX:45875587-45875249 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 78

Conread position: 4-342
Cow position: chrX:35822528-35822198 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 237
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 201, 45

Conread position: 4-342
Cow position: chrX:47279741-47280076 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 231
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 51, 92

Conread position: 4-369
Cow position: chrX:47186131-47186492 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 82

Conread position: 4-374
Cow position: chrX:4278922-4279291 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 79

Conread position: 4-397
Cow position: chrX:7337038-7336629 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 75

Conread position: 4-423
Cow position: chrX:28013243-28013665 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 199

Conread position: 4-427
Cow position: chrX:7513709-7513287 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 285
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 59, 92

Conread position: 4-436
Cow position: chrX:42492326-42492748 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 192

Conread position: 4-437
Cow position: chrX:45598413-45598843 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 51

Conread position: 4-481
Cow position: chrX:46032531-46033001 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 79

Conread position: 4-488
Cow position: chrX:5919687-5919180 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 61

Conread position: 4-490
Cow position: chrX:5637984-5638460 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 38

Conread position: 4-490
Cow position: chrX:45373089-45373584 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 325
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 53, 8

Conread position: 4-491
Cow position: chrX:5017216-5017699 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 84

Conread position: 4-492
Cow position: chrX:3654798-3654314 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 24

Conread position: 4-492
Cow position: chrX:5118303-5118777 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 73

Conread position: 4-492
Cow position: chrX:10865675-10866161 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 153

Conread position: 4-492
Cow position: chrX:15147002-15147478 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 75

Conread position: 4-492
Cow position: chrX:38094329-38094819 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 38

Conread position: 4-492
Cow position: chrX:46532295-46532814 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 81

Conread position: 5-127
Cow position: chrX:39094136-39094251 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 5-162
Cow position: chrX:5876297-5876143 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 5-165
Cow position: chrX:17498517-17498355 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 50, 77

Conread position: 5-167
Cow position: chrX:29687981-29688144 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 27, 74

Conread position: 5-168
Cow position: chrX:8327099-8326934 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 50, 73

Conread position: 5-170
Cow position: chrX:11781441-11781281 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 5-170
Cow position: chrX:28850912-28850757 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 5-172
Cow position: chrX:7910878-7911046 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 39, 33

Conread position: 5-181
Cow position: chrX:19761943-19761771 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 48, 0

Conread position: 5-181
Cow position: chrX:20345645-20345470 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 78

Conread position: 5-184
Cow position: chrX:30824179-30824001 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 156, 41

Conread position: 5-184
Cow position: chrX:35392109-35392280 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 5-190
Cow position: chrX:35285368-35285181 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 148
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 50, 77

Conread position: 5-191
Cow position: chrX:24170531-24170722 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 43, 81

Conread position: 5-201
Cow position: chrX:11653961-11653761 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 53, 37

Conread position: 5-201
Cow position: chrX:39290548-39290357 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 5-201
Cow position: chrX:42331470-42331276 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 155, 34

Conread position: 5-202
Cow position: chrX:4327989-4328186 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 55, 188

Conread position: 5-202
Cow position: chrX:16984829-16984638 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 152
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 48, 0

Conread position: 5-202
Cow position: chrX:32910291-32910101 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 158
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 59, 43

Conread position: 5-205
Cow position: chrX:39180039-39180240 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 50, 77

Conread position: 5-207
Cow position: chrX:4559928-4559731 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 160
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 50, 67

Conread position: 5-211
Cow position: chrX:20677953-20678152 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 197, 56

Conread position: 5-216
Cow position: chrX:38968089-38967875 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 48, 83

Conread position: 5-217
Cow position: chrX:42836375-42836165 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 50, 77

Conread position: 5-234
Cow position: chrX:17956883-17956660 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 179
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 59, 71

Conread position: 5-236
Cow position: chrX:19394749-19394515 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 62, 190

Conread position: 5-242
Cow position: chrX:11325914-11326143 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 197, 46

Conread position: 5-257
Cow position: chrX:1360276-1360028 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 183
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 147, 47

Conread position: 5-261
Cow position: chrX:4109379-4109128 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 192
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 50, 77

Conread position: 5-261
Cow position: chrX:20957433-20957186 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 51, 75

Conread position: 5-277
Cow position: chrX:22115121-22115395 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 202
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 40, 74

Conread position: 5-284
Cow position: chrX:40680809-40680525 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 77

Conread position: 5-296
Cow position: chrX:40283317-40283027 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 50, 131

Conread position: 5-312
Cow position: chrX:29230201-29229895 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 229
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 35, 202

Conread position: 5-331
Cow position: chrX:30840735-30840423 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 48

Conread position: 5-335
Cow position: chrX:20168752-20168426 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 73

Conread position: 5-347
Cow position: chrX:8917589-8917248 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 235
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 55, 185

Conread position: 5-355
Cow position: chrX:27228323-27227966 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 185

Conread position: 5-399
Cow position: chrX:1499848-1499468 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 37

Conread position: 5-409
Cow position: chrX:3580139-3579735 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 77

Conread position: 5-428
Cow position: chrX:42380916-42381330 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 74

Conread position: 5-429
Cow position: chrX:9201736-9201316 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 41

Conread position: 5-438
Cow position: chrX:44961948-44961507 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 75

Conread position: 5-444
Cow position: chrX:25570810-25571242 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 299
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 82, 28

Conread position: 5-471
Cow position: chrX:4996782-4996338 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 73

Conread position: 5-478
Cow position: chrX:34554918-34554450 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 78

Conread position: 5-480
Cow position: chrX:16762962-16762490 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 44

Conread position: 5-488
Cow position: chrX:35269051-35268600 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 49

Conread position: 5-489
Cow position: chrX:45429836-45430309 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 48

Conread position: 5-490
Cow position: chrX:27442344-27442844 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 67

Conread position: 5-492
Cow position: chrX:4632660-4633145 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 67

Conread position: 5-492
Cow position: chrX:12309191-12309682 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 77

Conread position: 5-492
Cow position: chrX:20339699-20340185 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 77

Conread position: 5-492
Cow position: chrX:20887451-20887938 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 48

Conread position: 5-492
Cow position: chrX:31729631-31729164 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 48

Conread position: 5-492
Cow position: chrX:41526340-41526813 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 8

Conread position: 5-497
Cow position: chrX:31260430-31260930 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 33

Conread position: 6-116
Cow position: chrX:43028422-43028314 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 6-205
Cow position: chrX:42480020-42479827 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 6-227
Cow position: chrX:32318494-32318274 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 139, 47

Conread position: 6-233
Cow position: chrX:46793557-46793780 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 197, 33

Conread position: 6-250
Cow position: chrX:23188596-23188829 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 6-271
Cow position: chrX:19965202-19965474 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 183
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 58, 78

Conread position: 6-409
Cow position: chrX:842351-841947 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 16

Conread position: 6-429
Cow position: chrX:17231930-17231503 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 190

Conread position: 6-432
Cow position: chrX:46588013-46587580 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 23

Conread position: 6-439
Cow position: chrX:34662653-34663080 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 78

Conread position: 6-452
Cow position: chrX:47588906-47588447 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 188

Conread position: 6-471
Cow position: chrX:40183161-40183623 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 72

Conread position: 6-473
Cow position: chrX:30922365-30921910 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 77

Conread position: 6-491
Cow position: chrX:24287740-24288206 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 165

Conread position: 6-492
Cow position: chrX:6414231-6413752 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 49

Conread position: 6-492
Cow position: chrX:15546075-15545603 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 76

Conread position: 6-492
Cow position: chrX:31489714-31489218 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 74

Conread position: 6-492
Cow position: chrX:34753981-34754486 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 78

Conread position: 6-492
Cow position: chrX:35273565-35273050 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 142

Conread position: 6-492
Cow position: chrX:40826557-40827041 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 87

Conread position: 6-493
Cow position: chrX:34454852-34454374 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 183

Conread position: 7-149
Cow position: chrX:40543336-40543472 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 7-159
Cow position: chrX:46533112-46533266 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 44, 76

Conread position: 7-189
Cow position: chrX:41454761-41454945 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 50, 76

Conread position: 7-203
Cow position: chrX:2936145-2935952 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 194, 41

Conread position: 7-260
Cow position: chrX:18964633-18964885 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 74

Conread position: 7-294
Cow position: chrX:47246568-47246843 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 195
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 270, 57

Conread position: 7-309
Cow position: chrX:44744630-44744928 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 203
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 48, 77

Conread position: 7-437
Cow position: chrX:9361076-9360644 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 77

Conread position: 7-492
Cow position: chrX:23563598-23564091 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 77

Conread position: 7-492
Cow position: chrX:31948742-31949225 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 77

Conread position: 7-492
Cow position: chrX:46770770-46771266 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 73

Conread position: 8-114
Cow position: chrX:6907219-6907324 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 56, 67

Conread position: 8-117
Cow position: chrX:21280-21171 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 8-124
Cow position: chrX:36961909-36961790 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 38, 72

Conread position: 8-152
Cow position: chrX:40056027-40056171 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 139, 135

Conread position: 8-162
Cow position: chrX:35681758-35681604 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 129
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 47, 78

Conread position: 8-168
Cow position: chrX:46982942-46983110 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 8-186
Cow position: chrX:23098018-23098192 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 33, 65

Conread position: 8-210
Cow position: chrX:29733391-29733603 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 46, 81

Conread position: 8-214
Cow position: chrX:35276177-35275969 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 47, 75

Conread position: 8-233
Cow position: chrX:17966524-17966307 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 175
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 222, 22

Conread position: 8-262
Cow position: chrX:48558937-48558686 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 48, 11

Conread position: 8-311
Cow position: chrX:24331968-24331665 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 74

Conread position: 8-367
Cow position: chrX:31252599-31252248 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 70

Conread position: 8-401
Cow position: chrX:29544691-29545083 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 45

Conread position: 8-429
Cow position: chrX:48010796-48010363 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 76

Conread position: 8-490
Cow position: chrX:45968337-45967870 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 69

Conread position: 8-491
Cow position: chrX:30133129-30133617 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 62

Conread position: 8-492
Cow position: chrX:11614875-11614427 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 10

Conread position: 8-492
Cow position: chrX:34503119-34502629 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 79

Conread position: 8-492
Cow position: chrX:41878742-41879224 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 17

Conread position: 9-141
Cow position: chrX:17525684-17525810 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 9-155
Cow position: chrX:23471678-23471823 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 9-158
Cow position: chrX:41858694-41858842 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 66, 46

Conread position: 9-179
Cow position: chrX:5026440-5026275 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 9-213
Cow position: chrX:42432324-42432528 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 139, 37

Conread position: 9-315
Cow position: chrX:4515878-4515567 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 46

Conread position: 9-463
Cow position: chrX:28865814-28866258 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 70

Conread position: 9-492
Cow position: chrX:34532708-34532237 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 60

Conread position: 10-165
Cow position: chrX:44754188-44754347 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 29

Conread position: 10-167
Cow position: chrX:27667613-27667456 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 32, 13

Conread position: 10-190
Cow position: chrX:25459541-25459726 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 21, 39

Conread position: 10-435
Cow position: chrX:6690072-6690485 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 66

Conread position: 11-133
Cow position: chrX:4750148-4750267 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 11-139
Cow position: chrX:14135863-14135737 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 11-213
Cow position: chrX:12972866-12972666 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 92, 31

Conread position: 11-289
Cow position: chrX:29050431-29050156 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 42

Conread position: 11-330
Cow position: chrX:40685141-40685463 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 60

Conread position: 11-395
Cow position: chrX:10252014-10252379 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 64

Conread position: 11-428
Cow position: chrX:17795168-17794755 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 65

Conread position: 11-492
Cow position: chrX:7179079-7178618 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 44

Conread position: 11-492
Cow position: chrX:37072574-37072112 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 44

Conread position: 11-494
Cow position: chrX:22482501-22482985 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 129

Conread position: 12-291
Cow position: chrX:1466347-1466068 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 204
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 191, 63

Conread position: 13-416
Cow position: chrX:37780925-37781331 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 56

Conread position: 13-492
Cow position: chrX:14883771-14884258 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 35

Conread position: 14-388
Cow position: chrX:44656777-44657155 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 41

Conread position: 15-438
Cow position: chrX:16416687-16416268 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 60

Conread position: 16-277
Cow position: chrX:23113466-23113200 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 59

Conread position: 16-281
Cow position: chrX:16575296-16575040 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 39, 67

Conread position: 16-332
Cow position: chrX:34315705-34315396 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 62

Conread position: 16-492
Cow position: chrX:38226926-38227384 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 66

Conread position: 18-160
Cow position: chrX:27270554-27270413 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 86, 37

Conread position: 18-438
Cow position: chrX:38642427-38642020 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 18

Conread position: 21-252
Cow position: chrX:6541547-6541789 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 34, 214

Conread position: 21-276
Cow position: chrX:47345508-47345257 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 57

Conread position: 21-488
Cow position: chrX:32170714-32171172 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 34

Conread position: 23-427
Cow position: chrX:40789387-40788975 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 283
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 28, 16

Conread position: 23-439
Cow position: chrX:43568092-43567698 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 20

Conread position: 24-142
Cow position: chrX:27170916-27170795 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 34, 53

Conread position: 24-373
Cow position: chrX:47165710-47166060 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 247
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 31, 5

Conread position: 24-407
Cow position: chrX:45459216-45458819 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 229
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 8, 59

Conread position: 24-492
Cow position: chrX:25338363-25337883 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 63

Conread position: 25-243
Cow position: chrX:6599609-6599828 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 177, 163

Conread position: 25-323
Cow position: chrX:45670399-45670101 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 207
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 26, 55

Conread position: 25-421
Cow position: chrX:6488735-6488363 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 34

Conread position: 25-493
Cow position: chrX:36311745-36311304 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 315
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 32, 137

Conread position: 26-242
Cow position: chrX:23089023-23088821 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 40, 5

Conread position: 26-315
Cow position: chrX:27119862-27119582 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 204
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 252, 29

Conread position: 27-139
Cow position: chrX:35019423-35019311 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 27-492
Cow position: chrX:33204796-33205286 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 55

Conread position: 28-388
Cow position: chrX:3488719-3489075 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 252
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 28, 55

Conread position: 28-422
Cow position: chrX:17042854-17042466 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 86

Conread position: 28-444
Cow position: chrX:10302513-10302089 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 283
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 16, 81

Conread position: 28-492
Cow position: chrX:14599704-14599239 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 50

Conread position: 28-492
Cow position: chrX:34192827-34192387 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 5

Conread position: 30-145
Cow position: chrX:23182814-23182930 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 30-214
Cow position: chrX:18046564-18046388 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 34, 46

Conread position: 30-406
Cow position: chrX:38853368-38852988 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 105

Conread position: 30-436
Cow position: chrX:11562313-11561916 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 270
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 249, 54

Conread position: 31-232
Cow position: chrX:23498513-23498711 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 33, 45

Conread position: 31-432
Cow position: chrX:15815247-15814863 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 12

Conread position: 31-432
Cow position: chrX:32623737-32623349 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 34

Conread position: 33-322
Cow position: chrX:27945887-27946183 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 204
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 33, 180

Conread position: 33-430
Cow position: chrX:32431791-32431395 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 279
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 12, 45

Conread position: 33-439
Cow position: chrX:17630634-17631043 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 202

Conread position: 33-492
Cow position: chrX:31442665-31443114 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 42

Conread position: 33-492
Cow position: chrX:38006605-38007062 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 33

Conread position: 34-192
Cow position: chrX:3860474-3860622 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 147, 29

Conread position: 34-196
Cow position: chrX:31744842-31745003 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 132, 13

Conread position: 34-342
Cow position: chrX:45099292-45098977 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 30, 43

Conread position: 34-361
Cow position: chrX:21986128-21986455 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 41

Conread position: 34-376
Cow position: chrX:16514103-16514443 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 228
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 50, 16

Conread position: 34-420
Cow position: chrX:46072657-46073044 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 27

Conread position: 34-438
Cow position: chrX:6563685-6563272 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 53

Conread position: 34-490
Cow position: chrX:28134504-28134057 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 79

Conread position: 34-492
Cow position: chrX:15006986-15007445 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 41

Conread position: 35-328
Cow position: chrX:6259985-6260289 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 42

Conread position: 35-351
Cow position: chrX:48385208-48385517 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 235
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 242, 28

Conread position: 35-516
Cow position: chrX:126928-126471 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 30

Conread position: 36-174
Cow position: chrX:37062422-37062561 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 28, 0

Conread position: 36-251
Cow position: chrX:32977922-32978129 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 169
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 41, 107

Conread position: 36-316
Cow position: chrX:5679410-5679684 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 12

Conread position: 36-492
Cow position: chrX:42171136-42171590 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 14

Conread position: 37-133
Cow position: chrX:19407575-19407670 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 37-147
Cow position: chrX:7107662-7107553 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 37-152
Cow position: chrX:43014512-43014627 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 21, 40

Conread position: 37-166
Cow position: chrX:4612721-4612850 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 37-169
Cow position: chrX:23574814-23574684 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 110
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 39

Conread position: 37-170
Cow position: chrX:40046419-40046547 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 37-185
Cow position: chrX:753317-753165 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 123
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 27, 39

Conread position: 37-193
Cow position: chrX:40355192-40355042 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 27, 39

Conread position: 37-198
Cow position: chrX:12191923-12191762 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 24, 106

Conread position: 37-210
Cow position: chrX:36848418-36848589 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 37-222
Cow position: chrX:20743764-20743578 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 147
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 159, 42

Conread position: 37-277
Cow position: chrX:5135359-5135603 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 71, 28

Conread position: 37-277
Cow position: chrX:41270825-41271076 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 190
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 26, 39

Conread position: 37-285
Cow position: chrX:11317807-11318054 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 168
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 241, 163

Conread position: 37-290
Cow position: chrX:37129432-37129177 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 45

Conread position: 37-300
Cow position: chrX:16348410-16348672 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 35

Conread position: 37-300
Cow position: chrX:16481409-16481661 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 182
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 21, 33

Conread position: 37-338
Cow position: chrX:616099-616402 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 39

Conread position: 37-342
Cow position: chrX:11084902-11085201 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 75

Conread position: 37-346
Cow position: chrX:9365515-9365822 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 39

Conread position: 37-346
Cow position: chrX:29680101-29680408 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 42

Conread position: 37-386
Cow position: chrX:42235364-42235722 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 39

Conread position: 37-388
Cow position: chrX:23785807-23785463 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 74

Conread position: 37-389
Cow position: chrX:43730063-43730406 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 34

Conread position: 37-429
Cow position: chrX:13382486-13382093 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 33

Conread position: 37-438
Cow position: chrX:618849-619248 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 38

Conread position: 37-438
Cow position: chrX:4043706-4044092 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 97

Conread position: 37-438
Cow position: chrX:7425628-7425224 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 277
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 7, 50

Conread position: 37-438
Cow position: chrX:27393865-27394254 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 34

Conread position: 37-438
Cow position: chrX:42011444-42011040 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 194

Conread position: 37-465
Cow position: chrX:17726137-17725711 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 157

Conread position: 37-488
Cow position: chrX:7695909-7695473 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 28

Conread position: 37-491
Cow position: chrX:40269655-40269183 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 159

Conread position: 37-492
Cow position: chrX:27516679-27516239 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 42

Conread position: 37-492
Cow position: chrX:40480706-40481166 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 39

Conread position: 38-162
Cow position: chrX:33151828-33151947 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 26, 38

Conread position: 38-180
Cow position: chrX:28098485-28098344 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 38-191
Cow position: chrX:31829301-31829454 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 26, 40

Conread position: 38-191
Cow position: chrX:42506073-42506220 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 16, 32

Conread position: 38-283
Cow position: chrX:18272901-18273143 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 168
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 166, 25

Conread position: 38-294
Cow position: chrX:29549392-29549644 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 38

Conread position: 38-309
Cow position: chrX:29194390-29194123 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 38

Conread position: 38-369
Cow position: chrX:46433652-46433311 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 43

Conread position: 38-380
Cow position: chrX:36068177-36067837 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 192

Conread position: 38-390
Cow position: chrX:10393948-10394288 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 249
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 19, 44

Conread position: 38-428
Cow position: chrX:42588500-42588901 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 268
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 99, 28

Conread position: 38-489
Cow position: chrX:878222-878659 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 17

Conread position: 38-492
Cow position: chrX:7718992-7718562 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 37

Conread position: 38-492
Cow position: chrX:18694770-18695215 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 98

Conread position: 39-256
Cow position: chrX:31626820-31627038 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 177
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 154, 37

Conread position: 39-259
Cow position: chrX:25788748-25788956 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 10, 0

Conread position: 39-354
Cow position: chrX:23562016-23561721 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 25

Conread position: 39-478
Cow position: chrX:25713953-25713520 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 300
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 189, 37

Conread position: 40-180
Cow position: chrX:34508702-34508562 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 36

Conread position: 40-185
Cow position: chrX:47342273-47342129 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 40

Conread position: 40-201
Cow position: chrX:21665084-21665243 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 40-206
Cow position: chrX:40531885-40532050 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 18, 37

Conread position: 40-265
Cow position: chrX:15820752-15820531 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 174
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 18, 36

Conread position: 40-284
Cow position: chrX:23562788-23562549 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 15

Conread position: 40-304
Cow position: chrX:4746088-4746346 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 18, 41

Conread position: 40-428
Cow position: chrX:27771810-27772186 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 40

Conread position: 40-438
Cow position: chrX:33493935-33493535 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 96

Conread position: 40-438
Cow position: chrX:41884254-41884658 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 26

Conread position: 40-439
Cow position: chrX:9416526-9416934 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 40

Conread position: 40-439
Cow position: chrX:24259425-24259819 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 24

Conread position: 40-442
Cow position: chrX:45175008-45174600 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 36

Conread position: 40-473
Cow position: chrX:6674758-6675200 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 302
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 39, 35

Conread position: 40-481
Cow position: chrX:8797407-8796967 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 38

Conread position: 40-485
Cow position: chrX:33640131-33639678 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 12

Conread position: 40-489
Cow position: chrX:5872475-5872025 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 40

Conread position: 40-491
Cow position: chrX:2301081-2300638 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 35

Conread position: 40-492
Cow position: chrX:630153-630590 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 29

Conread position: 41-335
Cow position: chrX:42873540-42873255 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 22

Conread position: 41-423
Cow position: chrX:6041053-6041420 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 255
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 155, 34

Conread position: 41-479
Cow position: chrX:29761528-29761963 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 286
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 174, 34

Conread position: 41-492
Cow position: chrX:45113777-45113342 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 38

Conread position: 42-169
Cow position: chrX:11181040-11181167 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 29

Conread position: 42-199
Cow position: chrX:1337136-1337279 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 42-204
Cow position: chrX:6222973-6223132 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 42-244
Cow position: chrX:27306608-27306407 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 161, 11

Conread position: 42-278
Cow position: chrX:4152875-4153114 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 22, 34

Conread position: 42-311
Cow position: chrX:33539323-33539052 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 191
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 132, 7

Conread position: 42-334
Cow position: chrX:7710382-7710679 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 37

Conread position: 42-405
Cow position: chrX:4825679-4826035 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 76

Conread position: 42-421
Cow position: chrX:6265443-6265809 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 98

Conread position: 42-438
Cow position: chrX:23513866-23514258 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 33

Conread position: 42-445
Cow position: chrX:17888267-17888652 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 34

Conread position: 42-471
Cow position: chrX:24424245-24424666 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 35

Conread position: 42-479
Cow position: chrX:37836734-37836308 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 39

Conread position: 42-491
Cow position: chrX:40557520-40557969 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 154

Conread position: 42-492
Cow position: chrX:11717627-11718074 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 34

Conread position: 42-492
Cow position: chrX:31373692-31373284 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 39

Conread position: 42-492
Cow position: chrX:34402162-34401704 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 23

Conread position: 42-492
Cow position: chrX:43527664-43527209 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 149

Conread position: 43-184
Cow position: chrX:23266569-23266429 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 119
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 32, 0

Conread position: 43-233
Cow position: chrX:27413664-27413476 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 144, 21

Conread position: 43-268
Cow position: chrX:19097065-19097291 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 178
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 107, 32

Conread position: 43-488
Cow position: chrX:20697454-20697893 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 37

Conread position: 43-492
Cow position: chrX:7278066-7277634 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 33

Conread position: 43-492
Cow position: chrX:48243321-48243746 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 8

Conread position: 44-217
Cow position: chrX:25412059-25411888 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 20, 36

Conread position: 44-415
Cow position: chrX:23092027-23091664 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 186

Conread position: 45-169
Cow position: chrX:29562933-29563053 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 13, 26

Conread position: 45-210
Cow position: chrX:42160776-42160618 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 18, 31

Conread position: 45-388
Cow position: chrX:31312182-31311835 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 31

Conread position: 46-327
Cow position: chrX:38728886-38728608 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 34

Conread position: 47-166
Cow position: chrX:10076122-10076003 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 17, 33

Conread position: 47-179
Cow position: chrX:18637642-18637508 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 94, 29

Conread position: 47-270
Cow position: chrX:22914891-22915107 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 17, 31

Conread position: 47-488
Cow position: chrX:30543134-30543572 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 29

Conread position: 47-491
Cow position: chrX:20801919-20801485 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 28

Conread position: 47-492
Cow position: chrX:11082468-11082908 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 182

Conread position: 47-492
Cow position: chrX:23583712-23583264 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 23

Conread position: 48-490
Cow position: chrX:45414155-45414592 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 27

Conread position: 48-492
Cow position: chrX:42469792-42470231 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 27

Conread position: 49-352
Cow position: chrX:25193805-25193506 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 202
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 152, 19

Conread position: 49-429
Cow position: chrX:37910591-37910222 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 14

Conread position: 49-492
Cow position: chrX:41192853-41192396 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 27

Conread position: 50-430
Cow position: chrX:5900610-5900225 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 28

Conread position: 51-166
Cow position: chrX:2551239-2551123 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 25

Conread position: 51-184
Cow position: chrX:4467113-4466981 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 51-216
Cow position: chrX:4615865-4616027 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 128, 26

Conread position: 51-262
Cow position: chrX:6463745-6463548 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 13, 27

Conread position: 51-429
Cow position: chrX:30420807-30421170 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 281
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 228, 12

Conread position: 51-438
Cow position: chrX:2029532-2029150 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 265
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 27, 34

Conread position: 51-438
Cow position: chrX:37119737-37119359 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 12

Conread position: 51-492
Cow position: chrX:15329787-15329359 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 12

Conread position: 52-423
Cow position: chrX:41084060-41083700 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 255
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 226, 23

Conread position: 52-491
Cow position: chrX:17964377-17964808 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 23

Conread position: 52-492
Cow position: chrX:7572052-7571612 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 142

Conread position: 53-346
Cow position: chrX:39415226-39415518 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 22

Conread position: 53-489
Cow position: chrX:32310250-32309810 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 22

Conread position: 53-491
Cow position: chrX:41733055-41733480 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 31

Conread position: 54-420
Cow position: chrX:29121190-29120836 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 21

Conread position: 54-492
Cow position: chrX:37232550-37232117 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 21

Conread position: 55-201
Cow position: chrX:38722264-38722119 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 111, 20

Conread position: 55-215
Cow position: chrX:38725950-38725795 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 55-342
Cow position: chrX:38066310-38066594 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 17, 163

Conread position: 55-451
Cow position: chrX:35288797-35288407 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 20

Conread position: 55-454
Cow position: chrX:11073049-11073447 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 20

Conread position: 56-251
Cow position: chrX:25328474-25328658 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 106, 0

Conread position: 56-262
Cow position: chrX:43426436-43426228 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 129, 19

Conread position: 56-401
Cow position: chrX:31340851-31340501 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 244
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 24, 19

Conread position: 56-418
Cow position: chrX:28929976-28929622 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 247
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 141, 12

Conread position: 56-420
Cow position: chrX:1503468-1503117 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 19

Conread position: 56-423
Cow position: chrX:15305155-15305513 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 252
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 74, 19

Conread position: 56-427
Cow position: chrX:10959254-10959631 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 20

Conread position: 56-429
Cow position: chrX:19930784-19930425 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 19

Conread position: 56-438
Cow position: chrX:6203682-6203315 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 253
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 117, 19

Conread position: 56-438
Cow position: chrX:22624619-22624241 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 172

Conread position: 56-468
Cow position: chrX:17542100-17541694 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 37

Conread position: 56-492
Cow position: chrX:7646397-7645964 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 19

Conread position: 57-231
Cow position: chrX:10305211-10305380 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 140, 18

Conread position: 57-241
Cow position: chrX:29553425-29553243 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 150
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 146, 18

Conread position: 57-259
Cow position: chrX:46429679-46429881 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 146, 18

Conread position: 57-334
Cow position: chrX:37986366-37986097 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 206
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 9, 19

Conread position: 57-407
Cow position: chrX:45846241-45845886 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 18

Conread position: 57-428
Cow position: chrX:17662458-17662827 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 19

Conread position: 57-479
Cow position: chrX:29289718-29289295 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 23

Conread position: 57-491
Cow position: chrX:36841003-36840574 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 297
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 140, 27

Conread position: 57-492
Cow position: chrX:25419013-25419454 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 27

Conread position: 57-492
Cow position: chrX:32743673-32743244 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 27

Conread position: 57-492
Cow position: chrX:47744227-47743783 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 284
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 140, 29

Conread position: 57-496
Cow position: chrX:1978648-1978198 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 305
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 140, 50

Conread position: 58-196
Cow position: chrX:24054816-24054673 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 102, 17

Conread position: 58-248
Cow position: chrX:19943097-19943286 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 159
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 145, 17

Conread position: 58-277
Cow position: chrX:45883832-45884053 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 41, 21

Conread position: 58-284
Cow position: chrX:36514753-36514980 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 17

Conread position: 58-428
Cow position: chrX:3130711-3130351 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 21

Conread position: 58-465
Cow position: chrX:33802867-33803283 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 283
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 10, 28

Conread position: 58-492
Cow position: chrX:41123198-41122778 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 17

Conread position: 59-249
Cow position: chrX:29115844-29115661 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 23, 17

Conread position: 59-303
Cow position: chrX:11851538-11851775 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 183
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 13, 42

Conread position: 59-327
Cow position: chrX:48044378-48044641 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 193
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 218, 16

Conread position: 59-339
Cow position: chrX:19273567-19273865 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 59-429
Cow position: chrX:47054387-47054758 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 265
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 128, 18

Conread position: 59-458
Cow position: chrX:17744196-17743803 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 266
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 18, 27

Conread position: 59-492
Cow position: chrX:38071633-38072061 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 21

Conread position: 60-361
Cow position: chrX:20584465-20584160 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 222
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 124, 15

Conread position: 60-490
Cow position: chrX:48248961-48248531 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 293
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 14, 47

Conread position: 60-492
Cow position: chrX:10411847-10412280 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 16

Conread position: 61-415
Cow position: chrX:37574979-37574639 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 132

Conread position: 61-439
Cow position: chrX:1514283-1514645 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 14

Conread position: 62-213
Cow position: chrX:4037039-4037188 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 123
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 68, 12

Conread position: 62-243
Cow position: chrX:2523547-2523722 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 152, 7

Conread position: 62-284
Cow position: chrX:20881809-20882023 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 174
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 140, 49

Conread position: 62-412
Cow position: chrX:7162191-7161858 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 13

Conread position: 62-485
Cow position: chrX:47481931-47481511 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 13

Conread position: 62-492
Cow position: chrX:35224432-35224008 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 162

Conread position: 63-438
Cow position: chrX:27287603-27287959 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 253
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 139, 21

Conread position: 63-489
Cow position: chrX:917234-917660 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 12

Conread position: 63-492
Cow position: chrX:36778532-36778111 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 16

Conread position: 64-438
Cow position: chrX:42498914-42499269 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 270
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 36, 17

Conread position: 64-438
Cow position: chrX:43049465-43049102 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 81

Conread position: 65-265
Cow position: chrX:12082192-12082391 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 131, 12

Conread position: 66-290
Cow position: chrX:19162209-19162432 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 154
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 211, 118

Conread position: 67-458
Cow position: chrX:19690345-19689958 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 12

Conread position: 69-259
Cow position: chrX:13359300-13359480 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 185, 99

Conread position: 69-327
Cow position: chrX:26493507-26493766 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 180
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 21, 28

Conread position: 69-437
Cow position: chrX:11938804-11939163 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 126

Conread position: 69-473
Cow position: chrX:35413739-35413355 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 74

Conread position: 70-191
Cow position: chrX:37665819-37665698 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 70-217
Cow position: chrX:48278389-48278247 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 70-222
Cow position: chrX:29585247-29585096 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 109
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 122, 0

Conread position: 70-369
Cow position: chrX:25388114-25388409 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 207
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 198, 40

Conread position: 70-428
Cow position: chrX:11454921-11455282 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 41

Conread position: 70-438
Cow position: chrX:47248650-47249028 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 262
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 37, 163

Conread position: 70-439
Cow position: chrX:39558221-39558591 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 41

Conread position: 70-487
Cow position: chrX:39545854-39546262 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 21

Conread position: 72-191
Cow position: chrX:48683294-48683413 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 72-423
Cow position: chrX:39126452-39126114 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 247
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 140, 121

Conread position: 72-492
Cow position: chrX:5333691-5334113 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 242
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 23, 122

Conread position: 74-413
Cow position: chrX:20791691-20792033 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 233
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 23, 36

Conread position: 74-490
Cow position: chrX:20030378-20029955 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 96

Conread position: 75-415
Cow position: chrX:9041121-9041446 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 237
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 136, 119

Conread position: 75-425
Cow position: chrX:13245721-13245364 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 237
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 19, 33

Conread position: 75-438
Cow position: chrX:40692628-40692978 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 155

Conread position: 75-439
Cow position: chrX:28111632-28111265 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 36

Conread position: 75-490
Cow position: chrX:11675190-11674766 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 287
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 9, 44

Conread position: 75-491
Cow position: chrX:11313663-11314071 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 284
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 122, 9

Conread position: 77-205
Cow position: chrX:35278450-35278323 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 115, 0

Conread position: 77-429
Cow position: chrX:27176193-27176551 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 7

Conread position: 77-438
Cow position: chrX:16283823-16284187 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 254
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 36, 5

Conread position: 77-490
Cow position: chrX:9161695-9161296 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 7

Conread position: 77-492
Cow position: chrX:29780867-29780451 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 268
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 29, 141

Conread position: 78-360
Cow position: chrX:22453978-22454252 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 202
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 108, 62

Conread position: 78-409
Cow position: chrX:8917961-8917642 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 226
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 98, 6

Conread position: 78-424
Cow position: chrX:4865353-4865025 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 240
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 187, 82

Conread position: 78-425
Cow position: chrX:11856550-11856202 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 115

Conread position: 79-186
Cow position: chrX:6213989-6213882 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 79-340
Cow position: chrX:21566526-21566260 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 196
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 118, 148

Conread position: 80-363
Cow position: chrX:30263375-30263087 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 196
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 73, 9

Conread position: 80-374
Cow position: chrX:23340852-23341144 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 199
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 199, 61

Conread position: 80-426
Cow position: chrX:27994130-27994485 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 232
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 43, 61

Conread position: 80-452
Cow position: chrX:35258613-35258982 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 248
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 122, 113

Conread position: 80-473
Cow position: chrX:21063342-21062941 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 251
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 116, 162

Conread position: 80-480
Cow position: chrX:14222193-14221801 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 276
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 51, 45

Conread position: 80-492
Cow position: chrX:16853263-16853683 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 274
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 106, 139

Conread position: 80-492
Cow position: chrX:27761465-27761046 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 263
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 26, 114

Conread position: 80-492
Cow position: chrX:40648768-40648372 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 271
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 105, 124

Conread position: 81-265
Cow position: chrX:44954465-44954280 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 128
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 126, 105

Conread position: 81-280
Cow position: chrX:46793773-46793965 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 81-312
Cow position: chrX:44837093-44836873 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 118, 82

Conread position: 81-326
Cow position: chrX:45005741-45005502 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 126, 138

Conread position: 81-351
Cow position: chrX:48570871-48571146 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 118, 106

Conread position: 81-396
Cow position: chrX:47300786-47301102 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 138, 112

Conread position: 81-397
Cow position: chrX:45149285-45148975 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 228
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 154, 106

Conread position: 81-397
Cow position: chrX:47302760-47303079 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 216
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 137, 112

Conread position: 81-455
Cow position: chrX:48652604-48652988 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 139

Conread position: 81-468
Cow position: chrX:45403708-45404104 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 111

Conread position: 81-473
Cow position: chrX:28602796-28603189 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 262
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 23, 123

Conread position: 81-480
Cow position: chrX:48194918-48195323 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 134

Conread position: 81-486
Cow position: chrX:46722617-46723029 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 136

Conread position: 81-488
Cow position: chrX:44834679-44835106 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 168

Conread position: 81-492
Cow position: chrX:26625554-26625979 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 148

Conread position: 81-492
Cow position: chrX:45089563-45089143 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 128

Conread position: 81-497
Cow position: chrX:44736883-44737290 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 286
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 197, 89

Conread position: 82-492
Cow position: chrX:11145217-11145632 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 270
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 24, 45

Conread position: 83-373
Cow position: chrX:45633671-45633392 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 190
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 83-438
Cow position: chrX:24132036-24132391 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 246
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 127, 28

Conread position: 83-438
Cow position: chrX:29032525-29032177 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 252
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 125, 24

Conread position: 83-492
Cow position: chrX:38936815-38936405 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 73

Conread position: 85-423
Cow position: chrX:30729299-30729630 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 225
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 106, 32

Conread position: 85-428
Cow position: chrX:6643380-6643030 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 238
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 127, 22

Conread position: 85-436
Cow position: chrX:7509252-7508901 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 39

Conread position: 85-438
Cow position: chrX:21004797-21004444 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 143

Conread position: 85-439
Cow position: chrX:8558350-8558704 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 237
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 9, 23

Conread position: 85-490
Cow position: chrX:47967720-47967308 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 145

Conread position: 85-491
Cow position: chrX:12826864-12826454 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 275
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 9, 23

Conread position: 85-491
Cow position: chrX:24201296-24200905 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 264
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 12, 78

Conread position: 87-265
Cow position: chrX:41111827-41111655 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 87-444
Cow position: chrX:13322876-13323247 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 254
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 75, 150

Conread position: 87-471
Cow position: chrX:7497353-7496972 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 20

Conread position: 87-491
Cow position: chrX:20377081-20376677 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 20

Conread position: 89-436
Cow position: chrX:27680507-27680165 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 138

Conread position: 89-466
Cow position: chrX:47145194-47144814 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 254
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 250, 93

Conread position: 89-470
Cow position: chrX:488613-488218 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 151

Conread position: 93-330
Cow position: chrX:48262711-48262474 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 164
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 182, 93

Conread position: 93-347
Cow position: chrX:48646501-48646751 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 110, 132

Conread position: 95-390
Cow position: chrX:2764964-2764677 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 196
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 105, 17

Conread position: 95-438
Cow position: chrX:23414266-23414608 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 244
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 102, 12

Conread position: 95-458
Cow position: chrX:45392998-45393377 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 265
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 91, 174

Conread position: 96-423
Cow position: chrX:21642380-21642703 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 90

Conread position: 96-445
Cow position: chrX:44873459-44873797 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 246
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 103, 39

Conread position: 96-445
Cow position: chrX:45993332-45992963 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 111

Conread position: 98-337
Cow position: chrX:27685349-27685108 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 95

Conread position: 98-481
Cow position: chrX:2467984-2467597 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 120

Conread position: 98-488
Cow position: chrX:755064-754668 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 131

Conread position: 100-491
Cow position: chrX:26440687-26441073 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 45

Conread position: 105-395
Cow position: chrX:40809786-40809489 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 98, 0

Conread position: 105-491
Cow position: chrX:16721713-16722095 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 260
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 174, 100

Conread position: 105-492
Cow position: chrX:18195008-18194619 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 116

Conread position: 105-492
Cow position: chrX:20877666-20878057 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 116

Conread position: 105-492
Cow position: chrX:21833982-21833591 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 116

Conread position: 105-492
Cow position: chrX:23451072-23451465 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 116

Conread position: 105-492
Cow position: chrX:27106352-27105964 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 75

Conread position: 105-492
Cow position: chrX:30143188-30143578 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 116

Conread position: 105-492
Cow position: chrX:32583716-32584107 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 263
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 81, 118

Conread position: 105-492
Cow position: chrX:37843810-37843426 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 15

Conread position: 105-492
Cow position: chrX:41157408-41157017 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 264
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 82, 117

Conread position: 105-492
Cow position: chrX:46297757-46297366 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 254
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 176, 88

Conread position: 106-492
Cow position: chrX:23264341-23264731 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 262
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 80, 115

Conread position: 107-496
Cow position: chrX:157686-158068 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 271
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 105, 28

Conread position: 108-396
Cow position: chrX:12405291-12405575 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 85

Conread position: 108-471
Cow position: chrX:37415982-37416348 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 43

Conread position: 108-492
Cow position: chrX:20945655-20945274 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 260
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 62, 104

Conread position: 111-289
Cow position: chrX:1572052-1572228 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 167, 81

Conread position: 111-448
Cow position: chrX:20710161-20709822 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 59

Conread position: 113-309
Cow position: chrX:4991928-4992127 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 71, 76

Conread position: 113-396
Cow position: chrX:43973630-43973360 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 199
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 77, 112

Conread position: 113-427
Cow position: chrX:13265542-13265849 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 72

Conread position: 113-492
Cow position: chrX:42507563-42507938 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 80

Conread position: 114-306
Cow position: chrX:47657470-47657276 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 82, 112

Conread position: 114-388
Cow position: chrX:47159436-47159700 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 198
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 83

Conread position: 114-395
Cow position: chrX:36961726-36961438 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 80

Conread position: 116-408
Cow position: chrX:29875995-29876277 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 206
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 87, 44

Conread position: 117-297
Cow position: chrX:13136151-13136329 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 89, 75

Conread position: 117-332
Cow position: chrX:27449917-27450133 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 85, 28

Conread position: 117-427
Cow position: chrX:11589507-11589821 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 75

Conread position: 121-324
Cow position: chrX:19003370-19003174 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 20

Conread position: 121-492
Cow position: chrX:24105701-24105332 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 76

Conread position: 123-369
Cow position: chrX:22466030-22465784 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 41, 114

Conread position: 124-450
Cow position: chrX:678481-678820 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 90

Conread position: 125-373
Cow position: chrX:48044126-48044375 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 86, 68

Conread position: 125-390
Cow position: chrX:37541191-37540932 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 190
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 154, 56

Conread position: 125-492
Cow position: chrX:6234376-6234729 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 101

Conread position: 127-384
Cow position: chrX:48035496-48035241 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 217, 66

Conread position: 127-492
Cow position: chrX:9226903-9227278 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 257
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 69, 103

Conread position: 129-438
Cow position: chrX:8517941-8517636 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 214
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 68, 102

Conread position: 129-438
Cow position: chrX:26875812-26876121 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 94

Conread position: 130-442
Cow position: chrX:42500566-42500250 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 217
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 148, 64

Conread position: 130-495
Cow position: chrX:48676128-48675779 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 253
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 324, 63

Conread position: 131-492
Cow position: chrX:34762139-34761772 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 237
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 8, 64

Conread position: 136-487
Cow position: chrX:47361829-47362175 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 231
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 197, 84

Conread position: 136-492
Cow position: chrX:13785298-13785672 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 267
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 67, 57

Conread position: 136-492
Cow position: chrX:29841105-29841463 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 242
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 69, 57

Conread position: 136-492
Cow position: chrX:32011097-32010737 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 242
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 145, 57

Conread position: 137-415
Cow position: chrX:2186315-2186041 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 192
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 59, 89

Conread position: 137-423
Cow position: chrX:7361805-7362078 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 200
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 17

Conread position: 137-491
Cow position: chrX:42585018-42585361 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 21

Conread position: 137-492
Cow position: chrX:19188992-19188642 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 60

Conread position: 137-492
Cow position: chrX:29844410-29844770 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 243
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 14, 85

Conread position: 138-268
Cow position: chrX:17301246-17301378 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 89

Conread position: 138-325
Cow position: chrX:16055274-16055084 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 11, 56

Conread position: 138-342
Cow position: chrX:32215262-32215053 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 21, 73

Conread position: 138-372
Cow position: chrX:46146501-46146735 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 67, 49

Conread position: 138-427
Cow position: chrX:11746903-11746613 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 130, 22

Conread position: 138-428
Cow position: chrX:41166902-41167194 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 88

Conread position: 138-470
Cow position: chrX:12018352-12018003 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 55

Conread position: 138-486
Cow position: chrX:28517662-28518012 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 228
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 70, 94

Conread position: 138-488
Cow position: chrX:32188300-32188649 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 233
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 141, 55

Conread position: 138-489
Cow position: chrX:35042278-35041931 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 58

Conread position: 138-490
Cow position: chrX:25232653-25232294 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 91

Conread position: 138-491
Cow position: chrX:1810100-1810454 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 89

Conread position: 138-491
Cow position: chrX:30163060-30162704 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 92

Conread position: 138-492
Cow position: chrX:28025325-28024969 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 227
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 83

Conread position: 138-492
Cow position: chrX:35409714-35409374 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 35

Conread position: 138-492
Cow position: chrX:45199833-45200182 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 226
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 58, 91

Conread position: 139-361
Cow position: chrX:18515463-18515237 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 63, 46

Conread position: 139-363
Cow position: chrX:41991986-41992207 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 177
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 17, 55

Conread position: 139-378
Cow position: chrX:12007320-12007554 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 140, 54

Conread position: 139-414
Cow position: chrX:41271597-41271875 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 189
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 63, 54

Conread position: 139-422
Cow position: chrX:10437609-10437889 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 180
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 198, 85

Conread position: 139-428
Cow position: chrX:13405253-13405546 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 196
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 47, 60

Conread position: 139-438
Cow position: chrX:39071753-39071457 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 199
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 140, 52

Conread position: 139-438
Cow position: chrX:46045104-46044804 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 210
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 63, 54

Conread position: 139-458
Cow position: chrX:2933782-2933462 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 218
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 66, 54

Conread position: 139-473
Cow position: chrX:38102384-38102719 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 234
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 63, 54

Conread position: 139-485
Cow position: chrX:36219585-36219243 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 222
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 140, 54

Conread position: 139-488
Cow position: chrX:27305989-27305636 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 228
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 66, 54

Conread position: 139-488
Cow position: chrX:45043635-45043268 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 257
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 21, 47

Conread position: 139-490
Cow position: chrX:2425059-2425414 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 244
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 47, 82

Conread position: 139-490
Cow position: chrX:14407389-14407742 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 232
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 36, 29

Conread position: 139-490
Cow position: chrX:31977783-31978137 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 229
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 145, 61

Conread position: 139-492
Cow position: chrX:1551009-1550656 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 238
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 47, 83

Conread position: 139-492
Cow position: chrX:2150872-2151226 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 235
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 63, 54

Conread position: 139-492
Cow position: chrX:2944805-2945162 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 238
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 140, 78

Conread position: 139-492
Cow position: chrX:3648755-3649102 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 239
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 63, 46

Conread position: 139-492
Cow position: chrX:5376433-5376075 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 242
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 47, 82

Conread position: 139-492
Cow position: chrX:6493795-6493438 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 241
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 85, 46

Conread position: 139-492
Cow position: chrX:6655204-6655561 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 240
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 7, 70

Conread position: 139-492
Cow position: chrX:7053673-7054029 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 249
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 140, 61

Conread position: 139-492
Cow position: chrX:9096727-9096373 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 243
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 140, 81

Conread position: 139-492
Cow position: chrX:16078720-16078375 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 228
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 65, 17

Conread position: 139-492
Cow position: chrX:16289502-16289856 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 247
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 63, 10

Conread position: 139-492
Cow position: chrX:17995522-17995165 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 235
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 58, 82

Conread position: 139-492
Cow position: chrX:18245045-18244695 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 238
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 141, 52

Conread position: 139-492
Cow position: chrX:18897592-18897945 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 247
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 56, 82

Conread position: 139-492
Cow position: chrX:19290821-19290478 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 249
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 46, 64

Conread position: 139-492
Cow position: chrX:22537885-22538248 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 250
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 47, 87

Conread position: 139-492
Cow position: chrX:23024768-23024410 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 246
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 47, 84

Conread position: 139-492
Cow position: chrX:23122454-23122090 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 247
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 48, 344

Conread position: 139-492
Cow position: chrX:23300017-23299660 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 54

Conread position: 139-492
Cow position: chrX:24281006-24280641 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 239
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 80

Conread position: 139-492
Cow position: chrX:24587391-24587748 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 244
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 47, 82

Conread position: 139-492
Cow position: chrX:26754583-26754923 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 237
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 47, 82

Conread position: 139-492
Cow position: chrX:27096182-27095825 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 244
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 47, 93

Conread position: 139-492
Cow position: chrX:27498831-27498474 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 245
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 63, 54

Conread position: 139-492
Cow position: chrX:28645935-28646279 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 238
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 68, 45

Conread position: 139-492
Cow position: chrX:29049078-29048738 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 245
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 63, 54

Conread position: 139-492
Cow position: chrX:30141255-30141619 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 232
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 140, 54

Conread position: 139-492
Cow position: chrX:30454559-30454916 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 243
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 47, 83

Conread position: 139-492
Cow position: chrX:31202903-31202546 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 239
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 47, 82

Conread position: 139-492
Cow position: chrX:32094387-32094744 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 241
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 47, 84

Conread position: 139-492
Cow position: chrX:35240924-35240570 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 245
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 47, 68

Conread position: 139-492
Cow position: chrX:39174160-39174507 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 236
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 140, 63

Conread position: 139-492
Cow position: chrX:41103853-41103494 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 243
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 47, 88

Conread position: 139-492
Cow position: chrX:42779063-42779420 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 234
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 66, 54

Conread position: 140-422
Cow position: chrX:34385383-34385105 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 138, 53

Conread position: 140-429
Cow position: chrX:22524466-22524760 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 194
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 65, 53

Conread position: 140-439
Cow position: chrX:21816325-21816020 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 200
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 37, 265

Conread position: 140-445
Cow position: chrX:9572585-9572276 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 206
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 65, 53

Conread position: 140-445
Cow position: chrX:9976498-9976189 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 206
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 65, 53

Conread position: 140-447
Cow position: chrX:45424763-45425074 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 201
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 144, 53

Conread position: 140-458
Cow position: chrX:22521037-22521359 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 206
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 141, 53

Conread position: 140-458
Cow position: chrX:36931375-36931058 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 210
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 65, 53

Conread position: 140-465
Cow position: chrX:2580461-2580132 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 216
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 65, 51

Conread position: 140-465
Cow position: chrX:20353004-20353334 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 210
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 141, 42

Conread position: 140-470
Cow position: chrX:41413721-41414056 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 222
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 11, 82

Conread position: 140-473
Cow position: chrX:1749446-1749784 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 224
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 82

Conread position: 140-473
Cow position: chrX:27751178-27751510 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 219
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 65, 53

Conread position: 140-473
Cow position: chrX:45939392-45939721 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 214
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 65, 53

Conread position: 140-481
Cow position: chrX:17605499-17605844 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 226
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 57, 99

Conread position: 140-486
Cow position: chrX:20021625-20021275 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 229
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 57, 81

Conread position: 140-488
Cow position: chrX:6037860-6038212 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 227
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 144, 53

Conread position: 140-488
Cow position: chrX:24904147-24903794 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 237
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 11, 82

Conread position: 140-490
Cow position: chrX:5123299-5123653 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 237
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 141, 53

Conread position: 140-490
Cow position: chrX:10527713-10528066 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 231
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 65, 53

Conread position: 140-490
Cow position: chrX:14134537-14134183 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 233
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 62, 53

Conread position: 140-490
Cow position: chrX:14409327-14409679 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 233
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 67, 53

Conread position: 140-490
Cow position: chrX:17055631-17055277 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 234
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 65, 53

Conread position: 140-490
Cow position: chrX:26974972-26974618 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 229
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 141, 45

Conread position: 140-490
Cow position: chrX:30816207-30816561 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 238
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 57, 81

Conread position: 140-491
Cow position: chrX:8782806-8782451 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 234
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 64, 53

Conread position: 140-491
Cow position: chrX:20038157-20038511 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 231
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 154, 53

Conread position: 140-491
Cow position: chrX:21598724-21598385 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 230
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 57, 76

Conread position: 140-491
Cow position: chrX:22772717-22772362 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 233
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 141, 53

Conread position: 140-491
Cow position: chrX:47385872-47386224 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 235
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 65, 53

Conread position: 140-492
Cow position: chrX:1781969-1781611 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 238
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 11, 82

Conread position: 140-492
Cow position: chrX:2160827-2160471 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 233
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 141, 80

Conread position: 140-492
Cow position: chrX:2362562-2362205 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 237
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 11, 82

Conread position: 140-492
Cow position: chrX:2499284-2499634 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 225
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 145, 53

Conread position: 140-492
Cow position: chrX:2665072-2664715 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 238
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 12, 82

Conread position: 140-492
Cow position: chrX:2812350-2812705 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 235
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 54, 65

Conread position: 140-492
Cow position: chrX:3157681-3157324 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 238
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 11, 82

Conread position: 140-492
Cow position: chrX:3417078-3417433 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 230
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 67, 53

Conread position: 140-492
Cow position: chrX:3657991-3658348 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 235
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 11, 82

Conread position: 140-492
Cow position: chrX:3894914-3895270 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 235
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 141, 53

Conread position: 140-492
Cow position: chrX:4621892-4622248 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 242
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 65, 53

Conread position: 140-492
Cow position: chrX:5306661-5306305 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 235
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 62, 53

Conread position: 140-492
Cow position: chrX:5319654-5320012 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 239
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 68, 81

Conread position: 140-492
Cow position: chrX:6373234-6372887 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 238
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 141, 45

Conread position: 140-492
Cow position: chrX:6558912-6558556 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 237
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 65, 53

Conread position: 140-492
Cow position: chrX:6869500-6869857 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 228
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 77, 81

Conread position: 140-492
Cow position: chrX:7445145-7444790 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 235
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 65, 53

Conread position: 140-492
Cow position: chrX:7755963-7755607 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 235
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 62, 53

Conread position: 140-492
Cow position: chrX:8434145-8434501 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 228
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 65, 53

Conread position: 140-492
Cow position: chrX:8484138-8483794 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 226
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 141, 92

Conread position: 140-492
Cow position: chrX:8530602-8530246 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 236
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 141, 53

Conread position: 140-492
Cow position: chrX:8591607-8591246 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 231
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 62, 53

Conread position: 140-492
Cow position: chrX:8641849-8641494 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 238
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 65, 53

Conread position: 140-492
Cow position: chrX:9018240-9018597 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 241
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 11, 82

Conread position: 140-492
Cow position: chrX:10428601-10428246 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 239
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 65, 54

Conread position: 140-492
Cow position: chrX:10916108-10915744 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 241
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 65, 53

Conread position: 140-492
Cow position: chrX:11672843-11672487 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 234
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 57, 89

Conread position: 140-492
Cow position: chrX:11860179-11860536 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 239
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 11, 82

Conread position: 140-492
Cow position: chrX:12146156-12145801 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 237
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 57, 81

Conread position: 140-492
Cow position: chrX:12347936-12347584 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 230
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 65, 53

Conread position: 140-492
Cow position: chrX:12775926-12776280 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 237
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 65, 32

Conread position: 140-492
Cow position: chrX:13396191-13396546 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 238
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 57, 78

Conread position: 140-492
Cow position: chrX:13971165-13971521 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 236
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 65, 53

Conread position: 140-492
Cow position: chrX:14121690-14122046 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 239
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 65, 53

Conread position: 140-492
Cow position: chrX:14152160-14152509 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 237
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 70, 53

Conread position: 140-492
Cow position: chrX:14463375-14463019 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 223
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 144, 80

Conread position: 140-492
Cow position: chrX:14598907-14598551 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 234
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 65, 53

Conread position: 140-492
Cow position: chrX:14800756-14801112 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 237
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 65, 53

Conread position: 140-492
Cow position: chrX:15114733-15114377 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 232
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 141, 43

Conread position: 140-492
Cow position: chrX:15172471-15172821 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 226
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 141, 53

Conread position: 140-492
Cow position: chrX:15438591-15438943 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 238
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 65, 53

Conread position: 140-492
Cow position: chrX:15577579-15577935 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 237
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 65, 53

Conread position: 140-492
Cow position: chrX:16279711-16279355 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 241
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 65, 53

Conread position: 140-492
Cow position: chrX:16358953-16359303 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 233
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 67, 53

Conread position: 140-492
Cow position: chrX:18461914-18462269 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 229
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 57, 81

Conread position: 140-492
Cow position: chrX:18655743-18656099 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 233
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 141, 53

Conread position: 140-492
Cow position: chrX:19196456-19196812 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 236
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 65, 53

Conread position: 140-492
Cow position: chrX:19494897-19495254 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 237
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 11, 82

Conread position: 140-492
Cow position: chrX:20320706-20321061 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 236
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 64, 53

Conread position: 140-492
Cow position: chrX:20743048-20742692 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 237
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 65, 53

Conread position: 140-492
Cow position: chrX:21011259-21011616 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 235
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 141, 79

Conread position: 140-492
Cow position: chrX:22078389-22078033 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 235
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 65, 53

Conread position: 140-492
Cow position: chrX:22557564-22557207 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 240
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 5, 82

Conread position: 140-492
Cow position: chrX:22888719-22888364 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 242
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 65, 53

Conread position: 140-492
Cow position: chrX:23140371-23140019 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 233
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 62, 53

Conread position: 140-492
Cow position: chrX:23235893-23235536 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 236
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 11, 82

Conread position: 140-492
Cow position: chrX:24768802-24769154 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 238
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 65, 53

Conread position: 140-492
Cow position: chrX:27627415-27627061 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 231
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 65, 53

Conread position: 140-492
Cow position: chrX:27997708-27997356 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 232
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 139, 53

Conread position: 140-492
Cow position: chrX:28514133-28513778 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 228
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 65, 53

Conread position: 140-492
Cow position: chrX:28555372-28555729 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 234
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 11, 82

Conread position: 140-492
Cow position: chrX:29913407-29913045 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 234
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 77, 202

Conread position: 140-492
Cow position: chrX:30158949-30159305 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 236
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 60, 81

Conread position: 140-492
Cow position: chrX:30171648-30172004 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 233
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 141, 53

Conread position: 140-492
Cow position: chrX:30530966-30531326 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 231
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 57, 81

Conread position: 140-492
Cow position: chrX:30686531-30686890 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 241
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 62, 53

Conread position: 140-492
Cow position: chrX:30823578-30823222 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 238
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 46, 79

Conread position: 140-492
Cow position: chrX:31813827-31814183 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 232
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 141, 53

Conread position: 140-492
Cow position: chrX:34333138-34333494 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 236
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 62, 53

Conread position: 140-492
Cow position: chrX:35533913-35533557 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 237
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 62, 51

Conread position: 140-492
Cow position: chrX:35612483-35612838 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 233
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 65, 53

Conread position: 140-492
Cow position: chrX:36479995-36479638 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 236
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 11, 82

Conread position: 140-492
Cow position: chrX:36730449-36730090 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 238
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 11, 82

Conread position: 140-492
Cow position: chrX:37060728-37061085 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 237
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 11, 82

Conread position: 140-492
Cow position: chrX:37764134-37764491 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 234
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 12, 80

Conread position: 140-492
Cow position: chrX:37772370-37772728 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 240
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 11, 82

Conread position: 140-492
Cow position: chrX:37816650-37816294 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 233
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 141, 53

Conread position: 140-492
Cow position: chrX:37958560-37958203 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 237
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 11, 66

Conread position: 140-492
Cow position: chrX:38230205-38230561 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 242
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 62, 53

Conread position: 140-492
Cow position: chrX:38331428-38331088 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 223
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 65, 53

Conread position: 140-492
Cow position: chrX:39559590-39559946 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 235
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 62, 53

Conread position: 140-492
Cow position: chrX:39667130-39667487 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 237
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 11, 82

Conread position: 140-492
Cow position: chrX:39714611-39714255 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 238
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 65, 53

Conread position: 140-492
Cow position: chrX:39731575-39731219 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 236
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 57, 81

Conread position: 140-492
Cow position: chrX:40591738-40591392 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 232
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 57, 81

Conread position: 140-492
Cow position: chrX:42121365-42121009 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 235
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 65, 53

Conread position: 140-492
Cow position: chrX:42166137-42165781 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 235
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 141, 53

Conread position: 140-492
Cow position: chrX:42460243-42459878 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 235
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 141, 53

Conread position: 140-492
Cow position: chrX:43101587-43101233 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 234
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 65, 53

Conread position: 140-492
Cow position: chrX:43511481-43511126 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 235
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 65, 53

Conread position: 140-492
Cow position: chrX:43979681-43979324 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 238
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 65, 32

Conread position: 140-492
Cow position: chrX:44388047-44387696 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 236
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 141, 53

Conread position: 140-492
Cow position: chrX:44558141-44557785 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 232
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 141, 53

Conread position: 140-492
Cow position: chrX:45237528-45237172 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 227
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 144, 51

Conread position: 140-492
Cow position: chrX:45263007-45263362 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 234
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 65, 53

Conread position: 140-492
Cow position: chrX:45904240-45903884 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 243
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 65, 53

Conread position: 140-492
Cow position: chrX:46578793-46579149 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 237
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 65, 53

Conread position: 140-492
Cow position: chrX:47608475-47608120 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 238
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 65, 31

Conread position: 141-414
Cow position: chrX:8070642-8070916 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 201
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 137, 52

Conread position: 141-424
Cow position: chrX:40474809-40475090 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 184
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 61, 44

Conread position: 141-439
Cow position: chrX:47756870-47757170 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 53

Conread position: 141-455
Cow position: chrX:46381721-46382033 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 220
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 83, 10

Conread position: 141-491
Cow position: chrX:41743974-41743620 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 88

Conread position: 141-492
Cow position: chrX:4343810-4343455 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 236
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 64, 52

Conread position: 141-492
Cow position: chrX:11820409-11820064 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 243
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 122, 41

Conread position: 141-492
Cow position: chrX:11975434-11975781 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 237
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 61, 44

Conread position: 141-492
Cow position: chrX:12466554-12466201 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 238
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 78, 44

Conread position: 141-492
Cow position: chrX:15259558-15259913 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 232
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 56, 80

Conread position: 141-492
Cow position: chrX:16466362-16466006 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 232
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 140, 52

Conread position: 141-492
Cow position: chrX:21416160-21415794 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 238
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 27, 10

Conread position: 141-492
Cow position: chrX:21749405-21749753 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 237
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 44, 88

Conread position: 141-492
Cow position: chrX:25945777-25946128 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 237
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 138, 57

Conread position: 141-492
Cow position: chrX:27422221-27422575 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 236
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 27, 32

Conread position: 141-492
Cow position: chrX:27976770-27977123 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 238
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 70, 45

Conread position: 141-492
Cow position: chrX:40544547-40544904 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 242
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 46, 78

Conread position: 142-428
Cow position: chrX:776728-777024 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 197
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 60, 51

Conread position: 142-438
Cow position: chrX:1104744-1105044 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 197
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 60, 51

Conread position: 142-438
Cow position: chrX:9855354-9855060 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 49

Conread position: 142-438
Cow position: chrX:9954195-9953901 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 84

Conread position: 142-439
Cow position: chrX:38840940-38840647 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 209
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 126, 30

Conread position: 142-473
Cow position: chrX:28105975-28105647 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 52

Conread position: 142-478
Cow position: chrX:40648044-40647698 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 84

Conread position: 142-492
Cow position: chrX:626000-626338 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 231
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 60, 51

Conread position: 142-492
Cow position: chrX:10932732-10932378 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 229
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 142, 51

Conread position: 142-492
Cow position: chrX:11949441-11949787 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 79

Conread position: 142-492
Cow position: chrX:15589815-15590166 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 232
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 63, 51

Conread position: 142-492
Cow position: chrX:24318119-24317772 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 247
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 55, 62

Conread position: 142-492
Cow position: chrX:24441188-24441541 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 245
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 23, 47

Conread position: 143-428
Cow position: chrX:16789801-16790067 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 143-429
Cow position: chrX:26751555-26751848 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 194
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 50

Conread position: 143-434
Cow position: chrX:14900676-14900957 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 13

Conread position: 143-492
Cow position: chrX:36240454-36240101 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 231
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 54, 78

Conread position: 143-492
Cow position: chrX:38443021-38442668 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 236
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 54, 78

Conread position: 144-428
Cow position: chrX:44870583-44870860 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 196
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 61, 49

Conread position: 144-438
Cow position: chrX:11673882-11673602 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 207
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 60, 49

Conread position: 144-438
Cow position: chrX:23970433-23970149 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 82

Conread position: 144-439
Cow position: chrX:23827647-23827348 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 196
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 53, 77

Conread position: 144-448
Cow position: chrX:2575890-2576194 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 201
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 52, 77

Conread position: 144-449
Cow position: chrX:39520397-39520706 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 205
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 53, 77

Conread position: 144-452
Cow position: chrX:27324727-27325040 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 208
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 53, 77

Conread position: 144-473
Cow position: chrX:22549360-22549029 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 218
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 137, 49

Conread position: 144-473
Cow position: chrX:33983548-33983881 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 222
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 58, 49

Conread position: 144-487
Cow position: chrX:23702707-23703055 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 230
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 53, 77

Conread position: 144-490
Cow position: chrX:18451033-18451371 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 231
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 53, 77

Conread position: 144-491
Cow position: chrX:13070544-13070895 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 226
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 53, 77

Conread position: 144-491
Cow position: chrX:13091104-13091455 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 228
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 53, 77

Conread position: 144-491
Cow position: chrX:13195913-13196264 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 231
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 53, 77

Conread position: 144-492
Cow position: chrX:361395-361747 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 229
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 53, 77

Conread position: 144-492
Cow position: chrX:1576205-1576557 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 240
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 53, 77

Conread position: 144-492
Cow position: chrX:1975540-1975891 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 235
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 53, 77

Conread position: 144-492
Cow position: chrX:2417426-2417778 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 233
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 53, 77

Conread position: 144-492
Cow position: chrX:3078530-3078881 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 232
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 53, 77

Conread position: 144-492
Cow position: chrX:3371801-3372151 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 230
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 29

Conread position: 144-492
Cow position: chrX:3388164-3387812 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 235
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 53, 77

Conread position: 144-492
Cow position: chrX:5407113-5406764 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 228
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 53, 77

Conread position: 144-492
Cow position: chrX:5867203-5866852 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 234
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 53, 77

Conread position: 144-492
Cow position: chrX:6567132-6566780 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 230
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 140, 49

Conread position: 144-492
Cow position: chrX:7312051-7311699 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 233
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 53, 77

Conread position: 144-492
Cow position: chrX:7510194-7509843 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 235
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 53, 77

Conread position: 144-492
Cow position: chrX:7742401-7742751 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 229
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 137, 63

Conread position: 144-492
Cow position: chrX:10496291-10495939 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 235
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 58, 49

Conread position: 144-492
Cow position: chrX:10922513-10922865 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 236
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 53, 77

Conread position: 144-492
Cow position: chrX:11664236-11663884 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 240
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 53, 77

Conread position: 144-492
Cow position: chrX:11715404-11715756 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 229
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 53, 77

Conread position: 144-492
Cow position: chrX:12033029-12032677 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 233
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 53, 77

Conread position: 144-492
Cow position: chrX:12458758-12458404 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 221
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 56, 82

Conread position: 144-492
Cow position: chrX:13385466-13385113 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 229
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 50, 77

Conread position: 144-492
Cow position: chrX:13448328-13447976 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 233
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 53, 77

Conread position: 144-492
Cow position: chrX:15505349-15504997 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 234
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 53, 77

Conread position: 144-492
Cow position: chrX:15781639-15781287 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 235
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 53, 77

Conread position: 144-492
Cow position: chrX:16286267-16285915 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 235
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 53, 77

Conread position: 144-492
Cow position: chrX:16478960-16478608 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 234
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 53, 77

Conread position: 144-492
Cow position: chrX:16735582-16735230 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 228
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 137, 76

Conread position: 144-492
Cow position: chrX:19473102-19473455 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 237
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 53, 77

Conread position: 144-492
Cow position: chrX:19774422-19774774 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 238
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 53, 77

Conread position: 144-492
Cow position: chrX:20031776-20032125 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 225
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 73, 96

Conread position: 144-492
Cow position: chrX:20099380-20099028 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 236
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 53, 77

Conread position: 144-492
Cow position: chrX:20616739-20617091 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 229
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 56, 77

Conread position: 144-492
Cow position: chrX:24757639-24757991 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 233
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 53, 77

Conread position: 144-492
Cow position: chrX:24967327-24966975 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 233
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 53, 77

Conread position: 144-492
Cow position: chrX:25276441-25276793 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 234
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 137, 49

Conread position: 144-492
Cow position: chrX:28057737-28058089 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 233
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 53, 77

Conread position: 144-492
Cow position: chrX:29508835-29508489 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 233
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 61, 49

Conread position: 144-492
Cow position: chrX:30981107-30981459 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 232
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 61, 47

Conread position: 144-492
Cow position: chrX:31605742-31605390 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 229
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 40, 77

Conread position: 144-492
Cow position: chrX:32038785-32039137 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 232
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 53, 77

Conread position: 144-492
Cow position: chrX:34095619-34095267 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 236
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 53, 77

Conread position: 144-492
Cow position: chrX:34285005-34285358 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 236
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 53, 84

Conread position: 144-492
Cow position: chrX:35498144-35497792 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 236
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 53, 77

Conread position: 144-492
Cow position: chrX:35803878-35803520 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 240
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 58, 43

Conread position: 144-492
Cow position: chrX:37497389-37497741 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 236
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 58, 49

Conread position: 144-492
Cow position: chrX:38015152-38014800 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 235
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 53, 77

Conread position: 144-492
Cow position: chrX:44168251-44168603 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 237
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 53, 77

Conread position: 145-295
Cow position: chrX:48201347-48201199 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 133, 52

Conread position: 145-303
Cow position: chrX:29487955-29488107 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 132, 48

Conread position: 145-336
Cow position: chrX:18417537-18417727 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 60, 38

Conread position: 145-429
Cow position: chrX:41199161-41198873 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 50

Conread position: 145-434
Cow position: chrX:18456459-18456156 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 58, 87

Conread position: 145-437
Cow position: chrX:39701277-39700988 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 202
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 59, 41

Conread position: 145-438
Cow position: chrX:15049548-15049246 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 207
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 62, 89

Conread position: 145-491
Cow position: chrX:3160975-3161309 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 239
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 250, 57

Conread position: 145-491
Cow position: chrX:29943208-29942858 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 226
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 139, 72

Conread position: 145-492
Cow position: chrX:6195697-6196048 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 233
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 52, 76

Conread position: 145-492
Cow position: chrX:23571740-23572094 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 30

Conread position: 145-492
Cow position: chrX:25288622-25288973 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 234
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 52, 76

Conread position: 145-492
Cow position: chrX:28845886-28845550 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 48

Conread position: 145-492
Cow position: chrX:38577566-38577239 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 146-411
Cow position: chrX:26940452-26940705 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 62, 48

Conread position: 146-448
Cow position: chrX:22857095-22856782 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 208
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 5, 48

Conread position: 146-457
Cow position: chrX:30245000-30245314 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 206
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 5, 46

Conread position: 146-468
Cow position: chrX:5300949-5300622 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 211
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 5, 76

Conread position: 146-471
Cow position: chrX:15094423-15094093 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 217
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 5, 48

Conread position: 146-479
Cow position: chrX:42875035-42874697 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 47

Conread position: 146-492
Cow position: chrX:5423009-5423360 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 230
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 5, 48

Conread position: 146-492
Cow position: chrX:5598921-5599272 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 232
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 5, 76

Conread position: 146-492
Cow position: chrX:9085277-9085627 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 235
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 7, 48

Conread position: 146-492
Cow position: chrX:12851189-12850838 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 231
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 5, 76

Conread position: 146-492
Cow position: chrX:27403889-27404239 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 240
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 5, 76

Conread position: 146-492
Cow position: chrX:30752831-30752480 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 230
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 5, 76

Conread position: 146-492
Cow position: chrX:34991088-34990747 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 81

Conread position: 146-492
Cow position: chrX:42461692-42462042 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 47

Conread position: 146-492
Cow position: chrX:48165575-48165229 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 239
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 51, 5

Conread position: 146-492
Cow position: chrX:48246795-48247127 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 238
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 45, 84

Conread position: 147-424
Cow position: chrX:30862367-30862076 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 50, 83

Conread position: 147-490
Cow position: chrX:42733911-42733573 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 229
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 56

Conread position: 147-491
Cow position: chrX:35681393-35681042 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 46

Conread position: 149-466
Cow position: chrX:20752304-20751993 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 45

Conread position: 150-407
Cow position: chrX:2967694-2967441 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 178
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 7

Conread position: 150-413
Cow position: chrX:10123305-10123562 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 189
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 128, 43

Conread position: 150-445
Cow position: chrX:47209394-47209123 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 214
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 108, 43

Conread position: 150-464
Cow position: chrX:15139499-15139808 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 43

Conread position: 150-473
Cow position: chrX:34270450-34270141 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 43

Conread position: 150-473
Cow position: chrX:47191359-47191670 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 78

Conread position: 150-486
Cow position: chrX:10293110-10293450 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 225
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 47, 71

Conread position: 150-492
Cow position: chrX:14781293-14781639 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 231
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 131, 43

Conread position: 150-492
Cow position: chrX:19015485-19015148 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 78

Conread position: 150-492
Cow position: chrX:29226524-29226182 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 233
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 131, 53

Conread position: 150-492
Cow position: chrX:40452170-40452507 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 43

Conread position: 150-492
Cow position: chrX:48328335-48328681 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 230
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 47, 71

Conread position: 151-407
Cow position: chrX:47454180-47453917 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 188
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 44, 77

Conread position: 151-469
Cow position: chrX:22815992-22815670 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 211
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 70

Conread position: 151-474
Cow position: chrX:22915517-22915190 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 226
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 46, 70

Conread position: 151-492
Cow position: chrX:5288636-5288981 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 230
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 133, 42

Conread position: 151-492
Cow position: chrX:9129107-9128762 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 225
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 46, 70

Conread position: 151-492
Cow position: chrX:14458123-14458461 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 222
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 70

Conread position: 151-492
Cow position: chrX:16074627-16074282 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 224
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 54, 42

Conread position: 151-492
Cow position: chrX:19022258-19022603 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 231
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 43, 70

Conread position: 151-492
Cow position: chrX:24968765-24969110 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 225
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 129, 42

Conread position: 151-492
Cow position: chrX:27594131-27594474 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 229
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 54, 42

Conread position: 151-492
Cow position: chrX:27759758-27759413 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 230
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 46, 70

Conread position: 151-492
Cow position: chrX:43767486-43767831 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 227
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 46, 70

Conread position: 151-493
Cow position: chrX:7486915-7486569 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 227
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 46, 70

Conread position: 152-414
Cow position: chrX:40567643-40567383 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 5

Conread position: 152-414
Cow position: chrX:41560211-41560455 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 152-452
Cow position: chrX:11498575-11498880 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 199
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 53, 41

Conread position: 152-470
Cow position: chrX:43409055-43408729 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 227
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 45, 74

Conread position: 152-479
Cow position: chrX:2964096-2963769 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 221
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 138, 41

Conread position: 152-492
Cow position: chrX:30837413-30837079 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 219
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 45, 69

Conread position: 153-289
Cow position: chrX:42789665-42789530 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 124, 40

Conread position: 153-492
Cow position: chrX:10306722-10306379 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 74

Conread position: 153-492
Cow position: chrX:17498130-17497802 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 40

Conread position: 153-492
Cow position: chrX:22821463-22821120 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 232
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 52, 40

Conread position: 153-492
Cow position: chrX:28157543-28157191 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 17

Conread position: 154-489
Cow position: chrX:43647700-43648035 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 229
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 23, 77

Conread position: 154-492
Cow position: chrX:36249817-36250156 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 70

Conread position: 155-307
Cow position: chrX:8326802-8326651 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 42, 72

Conread position: 155-309
Cow position: chrX:10079412-10079560 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 122, 27

Conread position: 155-339
Cow position: chrX:36723046-36723232 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 30, 49

Conread position: 155-369
Cow position: chrX:37750211-37750425 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 38

Conread position: 155-373
Cow position: chrX:29563326-29563546 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 32, 52

Conread position: 155-397
Cow position: chrX:4091683-4091448 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 125, 38

Conread position: 155-410
Cow position: chrX:8039859-8039598 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 189
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 135, 43

Conread position: 155-423
Cow position: chrX:28835859-28836128 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 202
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 45, 38

Conread position: 155-423
Cow position: chrX:29509398-29509669 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 5

Conread position: 155-436
Cow position: chrX:15997206-15996916 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 195
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 129, 69

Conread position: 155-478
Cow position: chrX:9997293-9997611 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 15

Conread position: 155-492
Cow position: chrX:14925043-14924706 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 20

Conread position: 155-492
Cow position: chrX:18999931-18999604 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 50

Conread position: 157-492
Cow position: chrX:3405324-3405649 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 36

Conread position: 157-492
Cow position: chrX:32127951-32128288 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 36

Conread position: 158-349
Cow position: chrX:29056158-29055968 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 36

Conread position: 158-490
Cow position: chrX:12116087-12115749 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 67

Conread position: 158-492
Cow position: chrX:16783531-16783200 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 231
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 121, 27

Conread position: 158-492
Cow position: chrX:47379427-47379761 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 67

Conread position: 158-494
Cow position: chrX:25238219-25237882 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 115

Conread position: 159-473
Cow position: chrX:48800573-48800262 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 216
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 55, 74

Conread position: 159-490
Cow position: chrX:43984216-43983878 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 242
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 26, 12

Conread position: 159-491
Cow position: chrX:3653798-3653470 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 11

Conread position: 160-390
Cow position: chrX:45875036-45874806 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 120, 33

Conread position: 160-450
Cow position: chrX:23497628-23497915 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 34

Conread position: 160-492
Cow position: chrX:38051393-38051726 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 223
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 25, 41

Conread position: 161-481
Cow position: chrX:45412624-45412935 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 32

Conread position: 162-429
Cow position: chrX:47538873-47538600 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 180
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 11, 61

Conread position: 162-491
Cow position: chrX:14819754-14819419 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 228
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 40, 31

Conread position: 162-492
Cow position: chrX:11581969-11581641 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 63

Conread position: 163-469
Cow position: chrX:10096067-10095755 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 30

Conread position: 164-356
Cow position: chrX:35969052-35969242 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 36, 29

Conread position: 164-366
Cow position: chrX:14003612-14003813 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 163
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 115, 29

Conread position: 164-401
Cow position: chrX:17908254-17908487 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 27

Conread position: 164-428
Cow position: chrX:40116451-40116195 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 62

Conread position: 164-439
Cow position: chrX:30832818-30833079 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 33

Conread position: 164-492
Cow position: chrX:38439515-38439179 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 63

Conread position: 165-428
Cow position: chrX:37048548-37048811 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 26

Conread position: 165-432
Cow position: chrX:2383518-2383255 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 198
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 114, 28

Conread position: 166-423
Cow position: chrX:4750271-4750523 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 31, 60

Conread position: 167-414
Cow position: chrX:45015607-45015369 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 188
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 112, 26

Conread position: 168-405
Cow position: chrX:26286011-26285772 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 58

Conread position: 168-438
Cow position: chrX:44053290-44053018 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 61

Conread position: 171-337
Cow position: chrX:44754632-44754794 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 21

Conread position: 171-400
Cow position: chrX:281152-280928 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 33, 59

Conread position: 171-426
Cow position: chrX:4482992-4482734 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 188
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 84, 28

Conread position: 172-481
Cow position: chrX:16807726-16808039 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 209
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 49

Conread position: 172-492
Cow position: chrX:5646074-5646398 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 221
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 25, 49

Conread position: 172-492
Cow position: chrX:24447829-24447507 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 213
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 25, 49

Conread position: 173-438
Cow position: chrX:8681899-8682170 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 192
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 24, 58

Conread position: 173-440
Cow position: chrX:47232857-47232595 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 38, 20

Conread position: 176-490
Cow position: chrX:20583044-20582738 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 17

Conread position: 176-492
Cow position: chrX:10351886-10351567 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 215
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 105, 44

Conread position: 178-487
Cow position: chrX:28098135-28097838 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 48

Conread position: 178-492
Cow position: chrX:32747703-32747364 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 15

Conread position: 180-479
Cow position: chrX:15037720-15038024 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 199
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 5, 29

Conread position: 182-390
Cow position: chrX:8991901-8991695 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 15, 24

Conread position: 182-488
Cow position: chrX:15119872-15120179 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 213
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 97, 34

Conread position: 184-491
Cow position: chrX:5353287-5353596 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 210
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 95, 31

Conread position: 184-492
Cow position: chrX:35610001-35609692 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 14

Conread position: 184-492
Cow position: chrX:48204902-48205207 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 209
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 18, 34

Conread position: 187-426
Cow position: chrX:24234463-24234706 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 37, 24

Conread position: 189-414
Cow position: chrX:11410023-11410243 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 9, 38

Conread position: 189-429
Cow position: chrX:42338939-42339167 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 14

Conread position: 189-490
Cow position: chrX:25452555-25452257 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 207
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 90, 11

Conread position: 189-492
Cow position: chrX:1946702-1947015 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 216
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 13, 29

Conread position: 191-492
Cow position: chrX:16714208-16713903 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 204
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 99, 34

Conread position: 192-384
Cow position: chrX:31256870-31256681 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 85, 20

Conread position: 192-440
Cow position: chrX:32981758-32982007 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 162
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 92, 33

Conread position: 192-458
Cow position: chrX:46679928-46680185 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 92, 23

Conread position: 192-473
Cow position: chrX:26709615-26709329 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 13, 8

Conread position: 192-490
Cow position: chrX:17783510-17783207 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 199
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 89, 33

Conread position: 192-492
Cow position: chrX:14846063-14846368 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 210
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 86, 33

Conread position: 192-492
Cow position: chrX:21686625-21686326 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 199
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 89, 33

Conread position: 192-492
Cow position: chrX:26276149-26275845 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 213
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 12, 42

Conread position: 192-492
Cow position: chrX:28752328-28752634 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 196
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 89, 33

Conread position: 192-492
Cow position: chrX:30197308-30197003 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 210
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 10, 48

Conread position: 192-492
Cow position: chrX:30198981-30199286 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 201
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 89, 33

Conread position: 192-492
Cow position: chrX:42591738-42591431 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 211
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 10, 30

Conread position: 193-429
Cow position: chrX:2648348-2648581 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 82, 34

Conread position: 193-438
Cow position: chrX:40540137-40540382 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 85, 6

Conread position: 193-440
Cow position: chrX:35284625-35284375 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 31

Conread position: 193-447
Cow position: chrX:44850665-44850925 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 181
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 86, 32

Conread position: 193-487
Cow position: chrX:42086862-42086574 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 32

Conread position: 193-491
Cow position: chrX:17271279-17271582 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 56

Conread position: 193-492
Cow position: chrX:17980606-17980301 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 176
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 10, 24

Conread position: 193-492
Cow position: chrX:39704704-39704411 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 216
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 8, 26

Conread position: 194-435
Cow position: chrX:28580231-28579984 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 74, 33

Conread position: 194-441
Cow position: chrX:47041986-47042234 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 169
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 85, 26

Conread position: 194-481
Cow position: chrX:35387900-35388190 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 18

Conread position: 194-489
Cow position: chrX:44096557-44096262 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 192
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 85, 14

Conread position: 194-490
Cow position: chrX:16703677-16703378 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 211
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 85, 26

Conread position: 194-490
Cow position: chrX:16711961-16711662 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 213
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 85, 26

Conread position: 194-491
Cow position: chrX:23386541-23386832 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 210
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 85, 28

Conread position: 194-491
Cow position: chrX:23396605-23396313 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 209
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 85, 26

Conread position: 194-491
Cow position: chrX:36693238-36692942 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 212
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 85, 20

Conread position: 194-492
Cow position: chrX:4904984-4905283 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 217
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 12, 23

Conread position: 194-492
Cow position: chrX:7550789-7551089 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 211
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 85, 26

Conread position: 194-492
Cow position: chrX:15008429-15008726 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 207
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 87, 9

Conread position: 194-492
Cow position: chrX:18077903-18078204 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 26

Conread position: 194-492
Cow position: chrX:18949738-18950039 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 212
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 85, 26

Conread position: 194-492
Cow position: chrX:23281010-23280712 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 214
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 85, 26

Conread position: 194-492
Cow position: chrX:30228106-30228405 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 85, 26

Conread position: 194-492
Cow position: chrX:37133527-37133828 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 86, 26

Conread position: 194-492
Cow position: chrX:45787133-45786836 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 96, 26

Conread position: 195-387
Cow position: chrX:1505712-1505523 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 82, 30

Conread position: 195-405
Cow position: chrX:46315374-46315588 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 169
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 85, 29

Conread position: 195-465
Cow position: chrX:16734565-16734290 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 10, 31

Conread position: 195-480
Cow position: chrX:45674851-45674562 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 189
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 85, 33

Conread position: 195-491
Cow position: chrX:38667612-38667927 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 215
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 9, 36

Conread position: 195-492
Cow position: chrX:29848631-29848925 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 211
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 84, 25

Conread position: 196-381
Cow position: chrX:45759394-45759214 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 81, 32

Conread position: 196-492
Cow position: chrX:2478625-2478921 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 83, 20

Conread position: 197-492
Cow position: chrX:22494008-22493713 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 212
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 82, 6

Conread position: 198-306
Cow position: chrX:32870446-32870556 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 198-458
Cow position: chrX:45399490-45399758 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 180
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 80, 0

Conread position: 198-492
Cow position: chrX:25458631-25458931 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 81, 0

Conread position: 199-438
Cow position: chrX:31745063-31745287 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 183
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 133, 25

Conread position: 199-492
Cow position: chrX:21665595-21665885 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 25

Conread position: 199-492
Cow position: chrX:33827016-33827326 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 212
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 11, 30

Conread position: 199-492
Cow position: chrX:41403980-41403667 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 27

Conread position: 199-492
Cow position: chrX:41410528-41410215 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 27

Conread position: 200-492
Cow position: chrX:25848909-25848621 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 152, 12

Conread position: 202-420
Cow position: chrX:19019109-19019334 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 181
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 78, 103

Conread position: 203-421
Cow position: chrX:30484205-30484428 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 62, 79

Conread position: 203-427
Cow position: chrX:1728433-1728646 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 28, 0

Conread position: 203-491
Cow position: chrX:160037-160325 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 199
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 65, 35

Conread position: 204-439
Cow position: chrX:42282422-42282195 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 177
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 20, 0

Conread position: 206-438
Cow position: chrX:10373307-10373067 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 73, 22

Conread position: 206-492
Cow position: chrX:16706799-16706505 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 198
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 72, 19

Conread position: 207-492
Cow position: chrX:48287458-48287734 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 209
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 70, 16

Conread position: 208-429
Cow position: chrX:43075977-43075767 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 209-478
Cow position: chrX:45694091-45693826 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 70, 15

Conread position: 211-426
Cow position: chrX:36922631-36922419 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 13

Conread position: 213-425
Cow position: chrX:48684239-48684450 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 66, 121

Conread position: 217-492
Cow position: chrX:25741128-25741408 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 195
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 62, 7

Conread position: 218-429
Cow position: chrX:45566617-45566399 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 61, 36

Conread position: 218-492
Cow position: chrX:4869529-4869249 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 63, 0

Conread position: 219-426
Cow position: chrX:25411820-25411612 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 171
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 58, 5

Conread position: 219-429
Cow position: chrX:44063741-44063949 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 190, 5

Conread position: 219-492
Cow position: chrX:38967627-38967358 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 5

Conread position: 219-492
Cow position: chrX:39555858-39556110 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 209
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 61, 5

Conread position: 220-492
Cow position: chrX:47318389-47318112 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 185
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 61, 5

Conread position: 223-414
Cow position: chrX:46429884-46430075 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 55, 15

Conread position: 223-429
Cow position: chrX:866299-866090 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 56, 122

Conread position: 224-335
Cow position: chrX:41764621-41764504 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 224-458
Cow position: chrX:27704273-27704513 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 224-469
Cow position: chrX:19333189-19333440 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 57, 0

Conread position: 224-489
Cow position: chrX:45658104-45658371 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 140, 55

Conread position: 224-491
Cow position: chrX:26531938-26531665 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 60, 0

Conread position: 224-492
Cow position: chrX:10444434-10444709 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 57, 0

Conread position: 224-492
Cow position: chrX:14163171-14162897 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 198
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 55, 0

Conread position: 224-492
Cow position: chrX:21785743-21785474 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 55, 250

Conread position: 224-492
Cow position: chrX:22608612-22608886 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 187
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 57, 0

Conread position: 224-492
Cow position: chrX:23047758-23047486 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 183
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 57, 0

Conread position: 224-492
Cow position: chrX:27469674-27469948 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 187
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 57, 0

Conread position: 224-492
Cow position: chrX:30538172-30538446 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 57, 0

Conread position: 224-492
Cow position: chrX:33020459-33020192 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 55

Conread position: 225-366
Cow position: chrX:9770702-9770853 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 225-387
Cow position: chrX:24149615-24149450 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 54, 0

Conread position: 225-424
Cow position: chrX:4942782-4942976 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 158
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 54, 23

Conread position: 225-448
Cow position: chrX:46424775-46425002 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 56, 177

Conread position: 225-481
Cow position: chrX:29066416-29066158 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 56, 0

Conread position: 225-490
Cow position: chrX:671030-671301 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 187
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 60, 0

Conread position: 225-490
Cow position: chrX:23987223-23986953 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 180
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 253

Conread position: 225-491
Cow position: chrX:44980058-44980330 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 188
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 37, 0

Conread position: 225-492
Cow position: chrX:2104380-2104111 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 183
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 59, 0

Conread position: 225-492
Cow position: chrX:3464099-3464370 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 188
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 56, 144

Conread position: 225-492
Cow position: chrX:4404511-4404241 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 65, 54

Conread position: 225-492
Cow position: chrX:11725284-11725561 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 188
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 60, 0

Conread position: 225-492
Cow position: chrX:23216086-23215813 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 188
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 56, 0

Conread position: 225-492
Cow position: chrX:29084099-29083831 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 186
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 183

Conread position: 225-492
Cow position: chrX:29356566-29356293 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 186
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 56, 0

Conread position: 225-492
Cow position: chrX:30021119-30021392 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 188
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 56, 0

Conread position: 226-491
Cow position: chrX:27020160-27019910 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 99, 50

Conread position: 226-492
Cow position: chrX:828865-828598 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 187
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 55, 86

Conread position: 227-438
Cow position: chrX:46984525-46984742 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 52, 26

Conread position: 228-438
Cow position: chrX:2206581-2206784 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 9

Conread position: 228-492
Cow position: chrX:7118669-7118938 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 153
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 228-492
Cow position: chrX:30950503-30950234 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 156
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 62, 0

Conread position: 231-429
Cow position: chrX:877060-877254 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 157
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 48, 23

Conread position: 232-467
Cow position: chrX:10756171-10755942 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 48, 97

Conread position: 233-492
Cow position: chrX:39699289-39699032 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 78, 21

Conread position: 234-491
Cow position: chrX:24125103-24125364 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 188
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 45, 34

Conread position: 234-491
Cow position: chrX:35632786-35633046 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 175
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 211

Conread position: 235-491
Cow position: chrX:44731562-44731307 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 189
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 42, 200

Conread position: 235-492
Cow position: chrX:4123802-4123541 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 104

Conread position: 237-438
Cow position: chrX:44908279-44908082 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 19, 0

Conread position: 237-492
Cow position: chrX:19674613-19674354 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 177
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 44, 19

Conread position: 237-492
Cow position: chrX:27590073-27590327 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 41, 215

Conread position: 238-409
Cow position: chrX:16324003-16324175 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 141
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 41, 86

Conread position: 238-484
Cow position: chrX:48227647-48227901 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 27, 0

Conread position: 238-492
Cow position: chrX:22578198-22578455 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 175
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 41, 208

Conread position: 239-491
Cow position: chrX:40121054-40121308 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 40, 0

Conread position: 240-490
Cow position: chrX:35937121-35937361 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 187
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 47

Conread position: 240-491
Cow position: chrX:11806054-11806309 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 248

Conread position: 240-492
Cow position: chrX:30179962-30180220 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 23, 9

Conread position: 240-492
Cow position: chrX:44087269-44087010 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 176
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 39, 0

Conread position: 241-367
Cow position: chrX:41271249-41271377 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 241-403
Cow position: chrX:29770215-29770384 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 241-452
Cow position: chrX:5288194-5288412 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 241-465
Cow position: chrX:20579788-20580019 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 136

Conread position: 241-489
Cow position: chrX:7806338-7806087 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 188
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 38, 12

Conread position: 241-490
Cow position: chrX:48371055-48370804 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 189
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 38, 11

Conread position: 241-491
Cow position: chrX:9168651-9168907 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 178
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 40, 0

Conread position: 241-491
Cow position: chrX:18223375-18223120 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 179
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 40, 173

Conread position: 241-492
Cow position: chrX:2274880-2274623 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 241-492
Cow position: chrX:2559001-2559254 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 175
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 40, 155

Conread position: 241-492
Cow position: chrX:5279891-5280147 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 170
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 241-492
Cow position: chrX:6652109-6652366 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 172
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 241-492
Cow position: chrX:11358102-11358359 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 40, 0

Conread position: 241-492
Cow position: chrX:12001184-12001441 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 40, 0

Conread position: 241-492
Cow position: chrX:12179924-12179674 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 38, 94

Conread position: 241-492
Cow position: chrX:13686684-13686423 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 181
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 40, 197

Conread position: 241-492
Cow position: chrX:15346006-15346263 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 40, 0

Conread position: 241-492
Cow position: chrX:15531192-15531449 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 185
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 40, 0

Conread position: 241-492
Cow position: chrX:18025002-18024745 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 40, 0

Conread position: 241-492
Cow position: chrX:21768766-21768510 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 40, 13

Conread position: 241-492
Cow position: chrX:22613349-22613092 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 241-492
Cow position: chrX:24509830-24509573 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 174
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 241-492
Cow position: chrX:24577602-24577859 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 40, 0

Conread position: 241-492
Cow position: chrX:26759606-26759863 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 40, 0

Conread position: 241-492
Cow position: chrX:29877221-29877475 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 179
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 49, 34

Conread position: 241-492
Cow position: chrX:30822547-30822290 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 40, 0

Conread position: 241-492
Cow position: chrX:30899424-30899682 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 181
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 40, 0

Conread position: 241-492
Cow position: chrX:30941144-30940887 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 172
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 241-492
Cow position: chrX:34413739-34413482 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 40, 0

Conread position: 241-492
Cow position: chrX:34519689-34519432 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 241-492
Cow position: chrX:36196055-36195798 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 241-492
Cow position: chrX:36820269-36820526 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 40, 0

Conread position: 241-492
Cow position: chrX:41488202-41488459 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 40, 0

Conread position: 241-493
Cow position: chrX:24482410-24482666 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 174
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 242-473
Cow position: chrX:34175236-34175473 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 39, 0

Conread position: 242-492
Cow position: chrX:3361780-3361525 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 39, 99

Conread position: 242-492
Cow position: chrX:19109079-19109335 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 29, 34

Conread position: 242-492
Cow position: chrX:21256002-21255743 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 34, 159

Conread position: 243-406
Cow position: chrX:2004009-2004169 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 44

Conread position: 243-440
Cow position: chrX:46700869-46701061 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 59, 38

Conread position: 243-490
Cow position: chrX:15560853-15561107 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 146

Conread position: 243-492
Cow position: chrX:29169373-29169628 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 244-492
Cow position: chrX:33764304-33764050 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 247-432
Cow position: chrX:6640082-6639890 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 157
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 32, 0

Conread position: 247-458
Cow position: chrX:26883182-26883395 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 91, 25

Conread position: 247-491
Cow position: chrX:24194053-24193816 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 163, 9

Conread position: 247-492
Cow position: chrX:23061398-23061160 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 68

Conread position: 248-492
Cow position: chrX:23109715-23109468 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 33, 218

Conread position: 249-456
Cow position: chrX:30763475-30763677 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 249-471
Cow position: chrX:16835432-16835204 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 153
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 249-492
Cow position: chrX:2931764-2932014 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 165
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 249-492
Cow position: chrX:21227425-21227178 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 183
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 14, 0

Conread position: 249-492
Cow position: chrX:38151644-38151394 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 30, 0

Conread position: 249-492
Cow position: chrX:42855365-42855117 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 204

Conread position: 249-492
Cow position: chrX:46606558-46606804 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 29, 159

Conread position: 250-419
Cow position: chrX:25036746-25036923 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 29, 74

Conread position: 250-469
Cow position: chrX:5555880-5556102 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 21, 58

Conread position: 253-492
Cow position: chrX:24809024-24809264 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 37, 6

Conread position: 254-405
Cow position: chrX:46672659-46672814 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 254-415
Cow position: chrX:47487441-47487283 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 24, 81

Conread position: 254-492
Cow position: chrX:32978312-32978551 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 21

Conread position: 255-507
Cow position: chrX:6607366-6607102 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 188
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 84, 152

Conread position: 256-427
Cow position: chrX:18812196-18812029 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 135, 0

Conread position: 256-469
Cow position: chrX:37853079-37852864 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 146
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 256-492
Cow position: chrX:9012275-9012033 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 166
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 256-492
Cow position: chrX:15090819-15091061 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 258-415
Cow position: chrX:7128002-7127845 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 20, 71

Conread position: 259-458
Cow position: chrX:6012164-6012367 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 71, 0

Conread position: 259-492
Cow position: chrX:29915281-29915519 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 20, 208

Conread position: 259-492
Cow position: chrX:30052528-30052763 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 261-452
Cow position: chrX:48536724-48536920 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 158
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 19, 136

Conread position: 265-458
Cow position: chrX:46746629-46746430 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 267-465
Cow position: chrX:29907293-29907496 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 190

Conread position: 267-486
Cow position: chrX:33823034-33822814 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 63, 100

Conread position: 267-490
Cow position: chrX:22567469-22567240 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 267-492
Cow position: chrX:41846602-41846828 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 14, 40

Conread position: 268-492
Cow position: chrX:29864493-29864725 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 149

Conread position: 270-464
Cow position: chrX:45959128-45959326 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 137
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 270-492
Cow position: chrX:29760633-29760405 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 271-428
Cow position: chrX:28856900-28856747 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 271-480
Cow position: chrX:18293858-18293654 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 8, 57

Conread position: 271-483
Cow position: chrX:31556565-31556783 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 8, 0

Conread position: 271-492
Cow position: chrX:48224256-48224480 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 272-439
Cow position: chrX:36154647-36154813 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 90, 14

Conread position: 272-458
Cow position: chrX:32546135-32545945 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 16, 73

Conread position: 273-452
Cow position: chrX:46989865-46990041 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 158, 60

Conread position: 275-488
Cow position: chrX:2523802-2524020 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 275-492
Cow position: chrX:9154289-9154066 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 6, 0

Conread position: 275-492
Cow position: chrX:30966030-30965807 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 6, 0

Conread position: 276-458
Cow position: chrX:31473449-31473262 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 67, 0

Conread position: 276-476
Cow position: chrX:2465354-2465561 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 68, 109

Conread position: 276-489
Cow position: chrX:20653321-20653103 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 7, 11

Conread position: 276-492
Cow position: chrX:10916671-10916460 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 169
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 63, 0

Conread position: 276-492
Cow position: chrX:21795418-21795202 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 168
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 18, 128

Conread position: 276-512
Cow position: chrX:37299522-37299283 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 58, 128

Conread position: 277-435
Cow position: chrX:9838063-9837901 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 277-438
Cow position: chrX:9538483-9538318 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 277-492
Cow position: chrX:5893154-5892934 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 13, 0

Conread position: 278-492
Cow position: chrX:22811810-22811592 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 12, 137

Conread position: 278-492
Cow position: chrX:29049884-29049681 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 58, 0

Conread position: 278-492
Cow position: chrX:30163315-30163532 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 148
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 12, 95

Conread position: 279-465
Cow position: chrX:3095849-3096037 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 11

Conread position: 279-480
Cow position: chrX:27459180-27458973 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 158
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 11, 0

Conread position: 279-492
Cow position: chrX:5112632-5112850 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 11, 0

Conread position: 279-492
Cow position: chrX:11566838-11566620 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 11, 0

Conread position: 279-492
Cow position: chrX:12360813-12360595 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 0

Conread position: 279-492
Cow position: chrX:23452674-23452892 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 11, 0

Conread position: 279-492
Cow position: chrX:24467202-24467419 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 279-492
Cow position: chrX:32331551-32331337 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 11, 141

Conread position: 279-492
Cow position: chrX:39549254-39549036 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 281-491
Cow position: chrX:34009666-34009457 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 118, 5

Conread position: 282-492
Cow position: chrX:27319137-27318921 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 282-492
Cow position: chrX:30863278-30863493 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 8, 0

Conread position: 283-412
Cow position: chrX:20787264-20787394 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 5, 51

Conread position: 283-487
Cow position: chrX:19228148-19228361 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 125, 34

Conread position: 283-490
Cow position: chrX:37102140-37102333 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 283-491
Cow position: chrX:26619446-26619655 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 51, 123

Conread position: 283-492
Cow position: chrX:45466157-45465940 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 31

Conread position: 284-448
Cow position: chrX:41050033-41049865 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 284-473
Cow position: chrX:22136344-22136530 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 284-492
Cow position: chrX:10415613-10415820 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 41, 0

Conread position: 284-492
Cow position: chrX:12852592-12852803 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 49, 123

Conread position: 286-428
Cow position: chrX:31059058-31058918 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 105
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 286-428
Cow position: chrX:33632092-33631946 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 286-429
Cow position: chrX:8492842-8492989 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 286-438
Cow position: chrX:13058495-13058340 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 112
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 286-438
Cow position: chrX:17122096-17122243 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 137, 16

Conread position: 286-438
Cow position: chrX:42530543-42530691 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 286-438
Cow position: chrX:47243362-47243519 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 286-439
Cow position: chrX:10107061-10107216 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 101

Conread position: 286-439
Cow position: chrX:37364653-37364506 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 286-447
Cow position: chrX:45787563-45787405 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 130
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 28, 0

Conread position: 286-458
Cow position: chrX:37377350-37377528 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 286-471
Cow position: chrX:16531909-16531726 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 152
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 117, 0

Conread position: 286-473
Cow position: chrX:25301839-25302023 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 74

Conread position: 286-473
Cow position: chrX:29925668-29925851 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 106, 0

Conread position: 286-474
Cow position: chrX:30919476-30919668 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 286-484
Cow position: chrX:6659291-6659087 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 156
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 23, 0

Conread position: 286-489
Cow position: chrX:22873314-22873106 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 66, 0

Conread position: 286-489
Cow position: chrX:25205634-25205419 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 286-490
Cow position: chrX:39346870-39347077 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 161
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 64, 128

Conread position: 286-491
Cow position: chrX:5127829-5127628 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 117, 0

Conread position: 286-491
Cow position: chrX:14908930-14908723 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 46, 119

Conread position: 286-491
Cow position: chrX:22329658-22329863 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 155, 9

Conread position: 286-491
Cow position: chrX:25329928-25329719 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 30, 152

Conread position: 286-491
Cow position: chrX:25617996-25618211 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 66, 0

Conread position: 286-491
Cow position: chrX:38794641-38794433 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 155, 0

Conread position: 286-491
Cow position: chrX:42841135-42841346 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 286-492
Cow position: chrX:5856603-5856806 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 114

Conread position: 286-492
Cow position: chrX:6905903-6906110 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 141
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 94, 130

Conread position: 286-492
Cow position: chrX:7382235-7382030 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 162
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 197, 0

Conread position: 286-492
Cow position: chrX:24735854-24735644 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 51, 0

Conread position: 286-492
Cow position: chrX:25283238-25283434 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 161
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 45, 0

Conread position: 286-492
Cow position: chrX:36534819-36535029 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 286-492
Cow position: chrX:44852010-44851796 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 58, 0

Conread position: 287-445
Cow position: chrX:37067251-37067085 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 287-458
Cow position: chrX:4629774-4629951 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 288-422
Cow position: chrX:18468945-18468811 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 99
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 288-439
Cow position: chrX:20168117-20167963 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 288-492
Cow position: chrX:3207653-3207856 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 42, 25

Conread position: 289-492
Cow position: chrX:14135094-14134887 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 140
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 289-492
Cow position: chrX:36365132-36364927 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 55, 145

Conread position: 289-492
Cow position: chrX:37403109-37403317 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 289-492
Cow position: chrX:45467306-45467514 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 55, 0

Conread position: 290-438
Cow position: chrX:15344653-15344502 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 50, 83

Conread position: 292-456
Cow position: chrX:47247006-47247167 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 292-492
Cow position: chrX:32144259-32144457 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 41, 0

Conread position: 292-492
Cow position: chrX:32870877-32871080 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 46, 88

Conread position: 292-492
Cow position: chrX:39386356-39386559 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 153

Conread position: 292-492
Cow position: chrX:48456435-48456639 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 140
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 41, 172

Conread position: 293-473
Cow position: chrX:11973750-11973570 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 8, 15

Conread position: 293-492
Cow position: chrX:45420764-45420969 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 159
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 46, 0

Conread position: 294-481
Cow position: chrX:46999763-46999944 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 294-492
Cow position: chrX:7677877-7677674 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 294-492
Cow position: chrX:40602864-40602670 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 136
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 296-423
Cow position: chrX:33538849-33538723 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 296-435
Cow position: chrX:20511396-20511255 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 21

Conread position: 296-489
Cow position: chrX:41433521-41433710 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 134
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 28, 80

Conread position: 296-492
Cow position: chrX:19771729-19771911 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 296-492
Cow position: chrX:45976779-45976576 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 104, 43

Conread position: 297-413
Cow position: chrX:23017907-23017786 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 297-488
Cow position: chrX:5856422-5856615 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 153
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 36, 122

Conread position: 299-438
Cow position: chrX:33519520-33519377 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 122
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 40, 0

Conread position: 301-415
Cow position: chrX:29193904-29193791 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 24

Conread position: 301-490
Cow position: chrX:5408950-5408763 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 16, 7

Conread position: 301-492
Cow position: chrX:29903638-29903448 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 7

Conread position: 301-492
Cow position: chrX:41885900-41886089 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 17, 7

Conread position: 302-492
Cow position: chrX:48134986-48135174 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 133
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 45, 49

Conread position: 303-492
Cow position: chrX:6454589-6454401 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 15, 31

Conread position: 305-492
Cow position: chrX:9898449-9898636 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 116, 13

Conread position: 306-492
Cow position: chrX:15620640-15620826 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 12, 26

Conread position: 308-489
Cow position: chrX:8103204-8103384 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 308-491
Cow position: chrX:6829025-6828842 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 10, 26

Conread position: 308-492
Cow position: chrX:9593246-9593429 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 26

Conread position: 308-492
Cow position: chrX:10992507-10992324 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 26

Conread position: 308-492
Cow position: chrX:21344283-21344100 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 128
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 10, 26

Conread position: 308-492
Cow position: chrX:22568130-22568313 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 128
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 10, 26

Conread position: 308-492
Cow position: chrX:23316534-23316714 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 308-492
Cow position: chrX:26506055-26506233 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 26

Conread position: 311-492
Cow position: chrX:24102870-24102685 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 28, 0

Conread position: 312-492
Cow position: chrX:7097342-7097164 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 6, 14

Conread position: 312-492
Cow position: chrX:21495648-21495464 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 314-487
Cow position: chrX:12096368-12096536 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 25, 0

Conread position: 315-492
Cow position: chrX:3570336-3570157 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 0

Conread position: 316-473
Cow position: chrX:25587317-25587161 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 318-492
Cow position: chrX:21861790-21861969 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 47, 26

Conread position: 318-492
Cow position: chrX:47024106-47023933 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 123
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 319-473
Cow position: chrX:12314237-12314079 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 319-490
Cow position: chrX:22115399-22115574 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 22, 100

Conread position: 319-492
Cow position: chrX:23135451-23135281 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 121, 0

Conread position: 319-492
Cow position: chrX:26753906-26754079 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 319-492
Cow position: chrX:44930514-44930340 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 75, 0

Conread position: 320-438
Cow position: chrX:48578293-48578175 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 321-468
Cow position: chrX:11459685-11459830 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 321-492
Cow position: chrX:616530-616697 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 18, 0

Conread position: 321-492
Cow position: chrX:28588847-28588676 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 321-492
Cow position: chrX:30060654-30060825 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 324-492
Cow position: chrX:26617046-26617215 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 325-489
Cow position: chrX:3808281-3808114 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 110, 0

Conread position: 327-438
Cow position: chrX:6654431-6654542 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 329-491
Cow position: chrX:2351931-2351769 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 330-492
Cow position: chrX:21844505-21844340 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 67, 59

Conread position: 331-488
Cow position: chrX:29723315-29723161 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 26, 0

Conread position: 331-492
Cow position: chrX:24291815-24291976 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 331-492
Cow position: chrX:37079672-37079833 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 331-492
Cow position: chrX:39954671-39954832 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 333-491
Cow position: chrX:22325941-22325782 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 96, 43

Conread position: 336-480
Cow position: chrX:45410180-45410325 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 123, 0

Conread position: 336-490
Cow position: chrX:17692122-17691968 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 337-457
Cow position: chrX:45956041-45955922 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 99, 0

Conread position: 339-492
Cow position: chrX:32214612-32214765 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 341-492
Cow position: chrX:43115027-43114879 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 345-481
Cow position: chrX:42927933-42928065 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 62, 73

Conread position: 348-480
Cow position: chrX:17888208-17888076 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 98
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 350-492
Cow position: chrX:525524-525382 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 103
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 352-492
Cow position: chrX:48423781-48423641 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 354-492
Cow position: chrX:24787878-24788010 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 365-488
Cow position: chrX:47965152-47965275 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 366-490
Cow position: chrX:42221741-42221860 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 7, 0

Show alignments to all cow chromosomes.