Cow genome map
| Conread name: | Ss1.1-Emb1-C0005211_J19.5 |
| Conread position: | 1-326 |
| Cow position: | chr10:8996203-8995888 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 204, 0 |
| Conread position: | 1-338 |
| Cow position: | chr10:9010183-9009843 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 222, 215 |
| Conread position: | 1-405 |
| Cow position: | chr10:9010267-9009863 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 176, 172 |
| Conread position: | 5-363 |
| Cow position: | chr10:9031306-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 210 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-659 |
| Cow position: | chr10:9010514-9009861 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 210 |
| Conread position: | 8-396 |
| Cow position: | chr10:21939016-21938631 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 215, 208 |
| Conread position: | 8-409 |
| Cow position: | chr10:8996280-8995889 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 48, 40 |
| Conread position: | 8-697 |
| Cow position: | chr10:8996868-8996179 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-697 |
| Cow position: | chr10:9010593-9009907 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 503, 31 |
| Conread position: | 9-709 |
| Cow position: | chr10:8996615-8995922 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 388, 375 |
| Conread position: | 9-722 |
| Cow position: | chr10:8996783-8996068 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 326 |
| Conread position: | 13-480 |
| Cow position: | chr10:21939095-21938631 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 284 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 204, 209 |
| Conread position: | 13-694 |
| Cow position: | chr10:8996695-8996014 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 564, 579 |
| Conread position: | 18-655 |
| Cow position: | chr10:8996522-8995894 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 559, 523 |
| Conread position: | 28-697 |
| Cow position: | chr10:8996932-8996263 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 76 |
| Conread position: | 31-447 |
| Cow position: | chr10:9031248-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 54-648 |
| Cow position: | chr10:21939222-21938631 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 356 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 87, 80 |
| Conread position: | 98-531 |
| Cow position: | chr10:9031231-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 374, 370 |
| Conread position: | 111-697 |
| Cow position: | chr10:8996933-8996347 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 51 |
| Conread position: | 182-615 |
| Cow position: | chr10:9031231-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 18 |
| Conread position: | 222-656 |
| Cow position: | chr10:21939222-21938788 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 275 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 124, 107 |
| Conread position: | 266-706 |
| Cow position: | chr10:9031231-9031672 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 202 |
| Conread position: | 306-657 |
| Cow position: | chr10:21939222-21938871 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 21, 31 |
Show alignments to all cow chromosomes.