Cow genome map


           Conread name:
           Ss1.1-Emb1-C0005211_J19.5
        

               Conread position:
               7-456
               

               Cow position:
               chr21:34222990-34222541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               285
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               338, 329
               

               Conread position:
               8-697
               

               Cow position:
               chr21:12608699-12608010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               695
               

               Alignm identity:
               400
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               215, 210
               

               Conread position:
               14-622
               

               Cow position:
               chr21:12659405-12660013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               612
               

               Alignm identity:
               346
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               41, 34
               

               Conread position:
               18-658
               

               Cow position:
               chr21:12659241-12659881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               647
               

               Alignm identity:
               368
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               52, 56
               

               Conread position:
               21-657
               

               Cow position:
               chr21:12608770-12608134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               640
               

               Alignm identity:
               367
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               132, 146
               

               Conread position:
               21-710
               

               Cow position:
               chr21:12608602-12607913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               695
               

               Alignm identity:
               396
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               28, 19
               

               Conread position:
               21-717
               

               Cow position:
               chr21:12608854-12608154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               708
               

               Alignm identity:
               414
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               34, 27
               

               Conread position:
               30-538
               

               Cow position:
               chr21:34223051-34222543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               513
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 144
               

               Conread position:
               53-698
               

               Cow position:
               chr21:12608906-12608261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               652
               

               Alignm identity:
               378
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               131, 119
               

               Conread position:
               97-635
               

               Cow position:
               chr21:12658816-12659354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               543
               

               Alignm identity:
               320
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               226, 234
               

               Conread position:
               97-699
               

               Cow position:
               chr21:34223149-34222548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               609
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 83
               

               Conread position:
               138-624
               

               Cow position:
               chr21:34223027-34222541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               291, 283
               
Show alignments to all cow chromosomes.