Cow genome map
Conread name: | Ss1.1-Emb1-C0005211_J19.5 |
Conread position: | 1-697 |
Cow position: | chr24:17036071-17035375 (view UCSC Genome Browser custom track) |
Alignm length: | 700 |
Alignm identity: | 462 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 105 |
Conread position: | 6-372 |
Cow position: | chr24:17070687-17071053 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 6-450 |
Cow position: | chr24:17070603-17071047 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 7-529 |
Cow position: | chr24:17070520-17071042 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 318, 324 |
Conread position: | 7-566 |
Cow position: | chr24:17078032-17077474 (view UCSC Genome Browser custom track) |
Alignm length: | 561 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 316, 324 |
Conread position: | 8-635 |
Cow position: | chr24:17035560-17034934 (view UCSC Genome Browser custom track) |
Alignm length: | 630 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 488, 482 |
Conread position: | 8-657 |
Cow position: | chr24:17078283-17077634 (view UCSC Genome Browser custom track) |
Alignm length: | 650 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 8-689 |
Cow position: | chr24:17036148-17035467 (view UCSC Genome Browser custom track) |
Alignm length: | 683 |
Alignm identity: | 447 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 576, 590 |
Conread position: | 8-697 |
Cow position: | chr24:17035980-17035291 (view UCSC Genome Browser custom track) |
Alignm length: | 691 |
Alignm identity: | 458 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 635, 628 |
Conread position: | 8-697 |
Cow position: | chr24:17036232-17035543 (view UCSC Genome Browser custom track) |
Alignm length: | 691 |
Alignm identity: | 461 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 401, 406 |
Conread position: | 8-697 |
Cow position: | chr24:17036316-17035627 (view UCSC Genome Browser custom track) |
Alignm length: | 692 |
Alignm identity: | 461 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 65 |
Conread position: | 8-697 |
Cow position: | chr24:17036400-17035711 (view UCSC Genome Browser custom track) |
Alignm length: | 691 |
Alignm identity: | 462 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 576, 590 |
Conread position: | 8-704 |
Cow position: | chr24:17035728-17035032 (view UCSC Genome Browser custom track) |
Alignm length: | 697 |
Alignm identity: | 454 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 9-270 |
Cow position: | chr24:17013227-17013488 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 163 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 9-694 |
Cow position: | chr24:17035643-17034958 (view UCSC Genome Browser custom track) |
Alignm length: | 687 |
Alignm identity: | 433 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 298, 291 |
Conread position: | 9-697 |
Cow position: | chr24:17035895-17035207 (view UCSC Genome Browser custom track) |
Alignm length: | 690 |
Alignm identity: | 450 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 568, 588 |
Conread position: | 9-697 |
Cow position: | chr24:17036483-17035795 (view UCSC Genome Browser custom track) |
Alignm length: | 692 |
Alignm identity: | 460 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 305, 292 |
Conread position: | 13-383 |
Cow position: | chr24:17013147-17013516 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 239 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 356, 0 |
Conread position: | 17-699 |
Cow position: | chr24:17035803-17035121 (view UCSC Genome Browser custom track) |
Alignm length: | 684 |
Alignm identity: | 442 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 579, 568 |
Conread position: | 23-697 |
Cow position: | chr24:17036552-17035879 (view UCSC Genome Browser custom track) |
Alignm length: | 676 |
Alignm identity: | 443 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 554, 7 |
Conread position: | 54-624 |
Cow position: | chr24:17070483-17071053 (view UCSC Genome Browser custom track) |
Alignm length: | 574 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 85 |
Conread position: | 54-704 |
Cow position: | chr24:17078153-17077503 (view UCSC Genome Browser custom track) |
Alignm length: | 651 |
Alignm identity: | 409 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 86-697 |
Cow position: | chr24:17070431-17071042 (view UCSC Genome Browser custom track) |
Alignm length: | 614 |
Alignm identity: | 409 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 321, 329 |
Conread position: | 87-339 |
Cow position: | chr24:16986406-16986655 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 165 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 152, 11 |
Conread position: | 97-467 |
Cow position: | chr24:17013147-17013516 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 239 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 360, 0 |
Conread position: | 181-538 |
Cow position: | chr24:17013147-17013504 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 230 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 142, 148 |
Conread position: | 196-424 |
Cow position: | chr24:16986428-16986656 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 150 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 127, 136 |
Conread position: | 265-636 |
Cow position: | chr24:17013147-17013517 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 241 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 317, 331 |
Conread position: | 285-507 |
Cow position: | chr24:16986433-16986655 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 152 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 116, 108 |
Conread position: | 349-696 |
Cow position: | chr24:17013147-17013494 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 221 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 226, 233 |
Conread position: | 433-697 |
Cow position: | chr24:17013147-17013411 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 175 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 445-659 |
Cow position: | chr24:16986425-16986639 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 140 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.