Cow genome map

Conread name: Ss1.1-Emb1-C0005211_J19.5

Conread position: 1-697
Cow position: chr24:17036071-17035375 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 105

Conread position: 6-372
Cow position: chr24:17070687-17071053 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-450
Cow position: chr24:17070603-17071047 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-529
Cow position: chr24:17070520-17071042 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 324

Conread position: 7-566
Cow position: chr24:17078032-17077474 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 324

Conread position: 8-635
Cow position: chr24:17035560-17034934 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 488, 482

Conread position: 8-657
Cow position: chr24:17078283-17077634 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 8-689
Cow position: chr24:17036148-17035467 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 576, 590

Conread position: 8-697
Cow position: chr24:17035980-17035291 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 635, 628

Conread position: 8-697
Cow position: chr24:17036232-17035543 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 401, 406

Conread position: 8-697
Cow position: chr24:17036316-17035627 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 65

Conread position: 8-697
Cow position: chr24:17036400-17035711 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 576, 590

Conread position: 8-704
Cow position: chr24:17035728-17035032 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 9-270
Cow position: chr24:17013227-17013488 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 163
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-694
Cow position: chr24:17035643-17034958 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 291

Conread position: 9-697
Cow position: chr24:17035895-17035207 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 568, 588

Conread position: 9-697
Cow position: chr24:17036483-17035795 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 292

Conread position: 13-383
Cow position: chr24:17013147-17013516 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 239
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 356, 0

Conread position: 17-699
Cow position: chr24:17035803-17035121 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 579, 568

Conread position: 23-697
Cow position: chr24:17036552-17035879 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 554, 7

Conread position: 54-624
Cow position: chr24:17070483-17071053 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 85

Conread position: 54-704
Cow position: chr24:17078153-17077503 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 86-697
Cow position: chr24:17070431-17071042 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 329

Conread position: 87-339
Cow position: chr24:16986406-16986655 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 165
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 152, 11

Conread position: 97-467
Cow position: chr24:17013147-17013516 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 239
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 360, 0

Conread position: 181-538
Cow position: chr24:17013147-17013504 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 230
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 142, 148

Conread position: 196-424
Cow position: chr24:16986428-16986656 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 150
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 127, 136

Conread position: 265-636
Cow position: chr24:17013147-17013517 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 241
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 317, 331

Conread position: 285-507
Cow position: chr24:16986433-16986655 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 116, 108

Conread position: 349-696
Cow position: chr24:17013147-17013494 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 221
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 226, 233

Conread position: 433-697
Cow position: chr24:17013147-17013411 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 175
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 445-659
Cow position: chr24:16986425-16986639 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.