Cow genome map
| Conread name: | Ss1.1-Emb1-C0005211_J19.5 |
| Conread position: | 1-349 |
| Cow position: | chr3:68045992-68046343 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 230 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 322, 0 |
| Conread position: | 1-451 |
| Cow position: | chr3:62722018-62721568 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 324, 336 |
| Conread position: | 1-489 |
| Cow position: | chr3:68027231-68027719 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 427, 416 |
| Conread position: | 1-530 |
| Cow position: | chr3:62722102-62721573 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 242 |
| Conread position: | 1-638 |
| Cow position: | chr3:68027147-68027783 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 322, 334 |
| Conread position: | 1-665 |
| Cow position: | chr3:62742832-62743475 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 77 |
| Conread position: | 1-697 |
| Cow position: | chr3:62742417-62743092 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 171 |
| Conread position: | 8-658 |
| Cow position: | chr3:68027072-68027720 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 319, 9 |
| Conread position: | 8-694 |
| Cow position: | chr3:62742755-62743420 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 252 |
| Conread position: | 8-697 |
| Cow position: | chr3:62742592-62743255 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 299, 45 |
| Conread position: | 8-706 |
| Cow position: | chr3:68045665-68046361 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 319, 9 |
| Conread position: | 8-710 |
| Cow position: | chr3:62722261-62721562 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 401, 9 |
| Conread position: | 9-635 |
| Cow position: | chr3:77351177-77350564 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 385 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 77, 64 |
| Conread position: | 17-655 |
| Cow position: | chr3:62742349-62742983 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 175 |
| Conread position: | 17-697 |
| Cow position: | chr3:68026995-68027675 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 316 |
| Conread position: | 22-697 |
| Cow position: | chr3:68045593-68046268 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 20 |
| Conread position: | 32-704 |
| Cow position: | chr3:62722323-62721651 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 291, 300 |
| Conread position: | 53-696 |
| Cow position: | chr3:77351301-77350669 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 408 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 25, 31 |
| Conread position: | 91-697 |
| Cow position: | chr3:62742256-62742856 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 97 |
| Conread position: | 101-681 |
| Cow position: | chr3:68045588-68046167 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 577, 0 |
| Conread position: | 183-722 |
| Cow position: | chr3:68026993-68027534 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 404, 390 |
| Conread position: | 258-697 |
| Cow position: | chr3:68026984-68027423 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 283 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 71, 75 |
| Conread position: | 353-694 |
| Cow position: | chr3:68045588-68045929 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 222, 237 |
| Conread position: | 437-697 |
| Cow position: | chr3:68045588-68045848 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 236, 223 |
Show alignments to all cow chromosomes.