Cow genome map
| Conread name: | Ss1.1-Emb1-C0005211_J19.5 |
| Conread position: | 1-237 |
| Cow position: | chr6:49341215-49341450 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 69, 82 |
| Conread position: | 8-299 |
| Cow position: | chr6:49341138-49341429 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-697 |
| Cow position: | chr6:49340384-49341071 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 578, 9 |
| Conread position: | 8-697 |
| Cow position: | chr6:49340466-49341155 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 393, 385 |
| Conread position: | 8-697 |
| Cow position: | chr6:49340718-49341407 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 321 |
| Conread position: | 9-635 |
| Cow position: | chr6:49396356-49396982 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 408, 420 |
| Conread position: | 9-658 |
| Cow position: | chr6:49340803-49341451 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 627, 0 |
| Conread position: | 9-659 |
| Cow position: | chr6:49396272-49396922 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 167 |
| Conread position: | 9-697 |
| Cow position: | chr6:49340551-49341239 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 398, 406 |
| Conread position: | 9-697 |
| Cow position: | chr6:49340635-49341323 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 322 |
| Conread position: | 9-697 |
| Cow position: | chr6:49396194-49396876 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 415, 34 |
| Conread position: | 13-659 |
| Cow position: | chr6:49396114-49396754 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 327, 113 |
| Conread position: | 53-659 |
| Cow position: | chr6:49396070-49396670 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 524, 157 |
| Conread position: | 56-716 |
| Cow position: | chr6:49395905-49396563 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 117 |
| Conread position: | 76-697 |
| Cow position: | chr6:49340366-49340987 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 325, 317 |
| Conread position: | 111-658 |
| Cow position: | chr6:49428729-49429276 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 331 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 68, 55 |
| Conread position: | 111-665 |
| Cow position: | chr6:49362336-49362876 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 327 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 228, 234 |
| Conread position: | 224-697 |
| Cow position: | chr6:49395821-49396288 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 167, 158 |
Show alignments to all cow chromosomes.